RNA–Protein interactions for RNA: ENST00000290894.12

SHF-201, Transcript of Src homology 2 domain containing F, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SHF, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-201ENST00000290894 KDRP35968 1356 aa24.13■■□□□ 1.45
SHF-201ENST00000290894 ARHGAP45Q92619 1136 aa24.13■■□□□ 1.45
SHF-201ENST00000290894 LMOD2Q6P5Q4 547 aa24.12■■□□□ 1.45
SHF-201ENST00000290894 CRB1P82279 1406 aa24.11■■□□□ 1.45
SHF-201ENST00000290894 DDRGK1Q96HY6 314 aa24.11■■□□□ 1.45
SHF-201ENST00000290894 ABCC4O15439 1325 aa24.11■■□□□ 1.45
SHF-201ENST00000290894 TSPYL4Q9UJ04 414 aa24.11■■□□□ 1.45
SHF-201ENST00000290894 ADGRL3Q9HAR2 1447 aa24.1■■□□□ 1.45
SHF-201ENST00000290894 VIRMAQ69YN4 1812 aaKnown RBP24.1■■□□□ 1.45
SHF-201ENST00000290894 SMC5Q8IY18 1101 aa24.1■■□□□ 1.45
SHF-201ENST00000290894 LNPKQ9C0E8 428 aa24.1■■□□□ 1.45
SHF-201ENST00000290894 USP19O94966 1318 aa24.1■■□□□ 1.45
SHF-201ENST00000290894 GAS2L2Q8NHY3 880 aa24.07■■□□□ 1.44
SHF-201ENST00000290894 API5Q9BZZ5 524 aaKnown RBP24.07■■□□□ 1.44
SHF-201ENST00000290894 SIRT2Q8IXJ6 389 aa24.06■■□□□ 1.44
SHF-201ENST00000290894 SLC4A2P04920 1241 aa24.05■■□□□ 1.44
SHF-201ENST00000290894 PROSER2Q86WR7 435 aaPredicted RBP24.05■■□□□ 1.44
SHF-201ENST00000290894 DAXXQ9UER7 740 aaPredicted RBP24.05■■□□□ 1.44
SHF-201ENST00000290894 LTN1O94822 1766 aa24.05■■□□□ 1.44
SHF-201ENST00000290894 NECTIN2Q92692 538 aa24.05■■□□□ 1.44
SHF-201ENST00000290894 NWD1Q149M9 1564 aa24.04■■□□□ 1.44
SHF-201ENST00000290894 GNAT3A8MTJ3 354 aa24.03■■□□□ 1.44
SHF-201ENST00000290894 ANKRD45Q5TZF3 282 aa24.03■■□□□ 1.44
SHF-201ENST00000290894 NBPF6Q5VWK0 638 aa24.03■■□□□ 1.44
SHF-201ENST00000290894 LRRC59Q96AG4 307 aaKnown RBP24.03■■□□□ 1.44
SHF-201ENST00000290894 NBPF4Q96M43 638 aa24.03■■□□□ 1.44
SHF-201ENST00000290894 NUCB1Q02818 461 aa24.02■■□□□ 1.44
SHF-201ENST00000290894 G2E3Q7L622 706 aa24.02■■□□□ 1.44
SHF-201ENST00000290894 KIAA0232Q92628 1395 aa24.02■■□□□ 1.44
SHF-201ENST00000290894 IL17REQ8NFR9 667 aa24.01■■□□□ 1.43
SHF-201ENST00000290894 CHD1LQ86WJ1 897 aa24.01■■□□□ 1.43
SHF-201ENST00000290894 IP6K1Q92551 441 aa24■■□□□ 1.43
SHF-201ENST00000290894 F6X3S4 739 aa24■■□□□ 1.43
SHF-201ENST00000290894 RGS12O14924 1447 aa24■■□□□ 1.43
SHF-201ENST00000290894 KIF24Q5T7B8 1368 aa23.99■■□□□ 1.43
SHF-201ENST00000290894 SLC4A10Q6U841 1118 aa23.99■■□□□ 1.43
SHF-201ENST00000290894 HAP1P54257 671 aaPredicted RBP23.98■■□□□ 1.43
SHF-201ENST00000290894 CHMP4BQ9H444 224 aaKnown RBP23.98■■□□□ 1.43
SHF-201ENST00000290894 NFAT5O94916 1531 aa23.97■■□□□ 1.43
SHF-201ENST00000290894 MSH6P52701 1360 aa23.97■■□□□ 1.43
SHF-201ENST00000290894 GCP02774 474 aa23.97■■□□□ 1.43
SHF-201ENST00000290894 DDX17Q92841 729 aaKnown RBP23.97■■□□□ 1.43
SHF-201ENST00000290894 MAP3K5Q99683 1374 aa23.96■■□□□ 1.43
SHF-201ENST00000290894 USP54Q70EL1 1684 aa23.96■■□□□ 1.43
SHF-201ENST00000290894 INTS3Q68E01 1043 aaKnown RBP23.96■■□□□ 1.43
SHF-201ENST00000290894 MFAP1P55081 439 aaKnown RBP23.95■■□□□ 1.43
SHF-201ENST00000290894 MEIS3Q99687 375 aa23.95■■□□□ 1.42
SHF-201ENST00000290894 UPF2Q9HAU5 1272 aaKnown RBP23.95■■□□□ 1.42
SHF-201ENST00000290894 RGPD2P0DJD1 1756 aa23.95■■□□□ 1.42
SHF-201ENST00000290894 KCNH5Q8NCM2 988 aa23.94■■□□□ 1.42
SHF-201ENST00000290894 RTL1A6NKG5 1358 aa23.94■■□□□ 1.42
SHF-201ENST00000290894 DNAJC5Q9H3Z4 198 aa23.93■■□□□ 1.42
SHF-201ENST00000290894 KRT28Q7Z3Y7 464 aa23.93■■□□□ 1.42
SHF-201ENST00000290894 GCC1Q96CN9 775 aa23.93■■□□□ 1.42
SHF-201ENST00000290894 LGR6Q9HBX8 967 aa23.92■■□□□ 1.42
SHF-201ENST00000290894 PTPRCP08575 1304 aa23.92■■□□□ 1.42
SHF-201ENST00000290894 APBB1O00213 710 aa23.91■■□□□ 1.42
SHF-201ENST00000290894 HTATSF1O43719 755 aaKnown RBP23.91■■□□□ 1.42
SHF-201ENST00000290894 HSPA2P54652 639 aa23.91■■□□□ 1.42
SHF-201ENST00000290894 RTL5Q5HYW3 569 aaPredicted RBP23.91■■□□□ 1.42
SHF-201ENST00000290894 TBC1D32Q96NH3 1257 aa23.91■■□□□ 1.42
SHF-201ENST00000290894 TAF7Q15545 349 aaPredicted RBP23.9■■□□□ 1.42
SHF-201ENST00000290894 STK31Q9BXU1 1019 aa23.9■■□□□ 1.42
SHF-201ENST00000290894 C19orf44Q9H6X5 657 aa23.9■■□□□ 1.42
SHF-201ENST00000290894 AXIN2Q9Y2T1 843 aa23.9■■□□□ 1.42
SHF-201ENST00000290894 ZC3H6P61129 1189 aaKnown RBP23.89■■□□□ 1.42
SHF-201ENST00000290894 ARHGEF25Q86VW2 580 aa23.89■■□□□ 1.41
SHF-201ENST00000290894 FKBP5Q13451 457 aaPredicted RBP23.88■■□□□ 1.41
SHF-201ENST00000290894 MPRIPQ6WCQ1 1025 aa23.87■■□□□ 1.41
SHF-201ENST00000290894 C1orf167Q5SNV9 1468 aa23.87■■□□□ 1.41
SHF-201ENST00000290894 LRRC37A3O60309 1634 aa23.87■■□□□ 1.41
SHF-201ENST00000290894 CEP85Q6P2H3 762 aa23.86■■□□□ 1.41
SHF-201ENST00000290894 ATP10DQ9P241 1426 aa23.86■■□□□ 1.41
SHF-201ENST00000290894 FLIIQ13045 1269 aa23.86■■□□□ 1.41
SHF-201ENST00000290894 ZNF530Q6P9A1 599 aaPredicted RBP23.86■■□□□ 1.41
SHF-201ENST00000290894 ANKRD24Q8TF21 1146 aa23.86■■□□□ 1.41
SHF-201ENST00000290894 C16orf71Q8IYS4 520 aaPredicted RBP23.85■■□□□ 1.41
SHF-201ENST00000290894 TMEM94Q12767 1356 aa23.85■■□□□ 1.41
SHF-201ENST00000290894 KCNQ3O43525 872 aa23.85■■□□□ 1.41
SHF-201ENST00000290894 ATF3P18847 181 aa23.85■■□□□ 1.41
SHF-201ENST00000290894 CCDC30Q5VVM6 783 aa23.85■■□□□ 1.41
SHF-201ENST00000290894 EIF2S2P20042 333 aaKnown RBP23.84■■□□□ 1.41
SHF-201ENST00000290894 ANKRD44Q8N8A2 993 aa23.84■■□□□ 1.41
SHF-201ENST00000290894 C22orf23Q9BZE7 217 aa23.84■■□□□ 1.41
SHF-201ENST00000290894 DCTPP1Q9H773 170 aa23.83■■□□□ 1.41
SHF-201ENST00000290894 SMARCA5O60264 1052 aaPredicted RBP23.83■■□□□ 1.41
SHF-201ENST00000290894 CABLES1Q8TDN4 633 aa23.82■■□□□ 1.4
SHF-201ENST00000290894 HDGFL1Q5TGJ6 251 aa23.82■■□□□ 1.4
SHF-201ENST00000290894 OTUD7AQ8TE49 926 aaPredicted RBP23.82■■□□□ 1.4
SHF-201ENST00000290894 SLKQ9H2G2 1235 aaPredicted RBP23.82■■□□□ 1.4
SHF-201ENST00000290894 PHAXQ9H814 394 aaKnown RBP23.81■■□□□ 1.4
SHF-201ENST00000290894 BMP2KLQ5H9B9 411 aa23.81■■□□□ 1.4
SHF-201ENST00000290894 CEMIPQ8WUJ3 1361 aa23.8■■□□□ 1.4
SHF-201ENST00000290894 RPAP2Q8IXW5 612 aaPredicted RBP23.8■■□□□ 1.4
SHF-201ENST00000290894 SPRYD3Q8NCJ5 442 aa23.8■■□□□ 1.4
SHF-201ENST00000290894 PXDNQ92626 1479 aa23.8■■□□□ 1.4
SHF-201ENST00000290894 TEFQ10587 303 aa23.79■■□□□ 1.4
SHF-201ENST00000290894 TRPM3Q9HCF6 1732 aaPredicted RBP23.79■■□□□ 1.4
SHF-201ENST00000290894 DEKP35659 375 aaKnown RBP23.79■■□□□ 1.4
SHF-201ENST00000290894 CCT4P50991 539 aaKnown RBP23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms