RNA–Protein interactions for RNA: ENST00000288462.4

C9orf43-201, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-201ENST00000288462 CHL1O00533 1208 aa13.04□□□□□ -0.32
C9orf43-201ENST00000288462 GCP02774 474 aa13.04□□□□□ -0.32
C9orf43-201ENST00000288462 TSPYL6Q8N831 410 aa13.04□□□□□ -0.32
C9orf43-201ENST00000288462 HTATSF1O43719 755 aaKnown RBP13.04□□□□□ -0.32
C9orf43-201ENST00000288462 MCM10Q7L590 875 aa13.04□□□□□ -0.32
C9orf43-201ENST00000288462 FTSJ3Q8IY81 847 aaKnown RBP13.04□□□□□ -0.32
C9orf43-201ENST00000288462 NOB1Q9ULX3 412 aaKnown RBP13.04□□□□□ -0.32
C9orf43-201ENST00000288462 TNS3Q68CZ2 1445 aa13.03□□□□□ -0.32
C9orf43-201ENST00000288462 COL18A1P39060 1754 aa13.03□□□□□ -0.32
C9orf43-201ENST00000288462 IPO8O15397 1037 aaKnown RBP13.03□□□□□ -0.32
C9orf43-201ENST00000288462 TWISTNBQ3B726 338 aaPredicted RBP13.03□□□□□ -0.32
C9orf43-201ENST00000288462 MAP3K5Q99683 1374 aa13.03□□□□□ -0.32
C9orf43-201ENST00000288462 MRPL50Q8N5N7 158 aaKnown RBP13.03□□□□□ -0.32
C9orf43-201ENST00000288462 C8orf58Q8NAV2 365 aa13.03□□□□□ -0.32
C9orf43-201ENST00000288462 FAM208AQ9UK61 1670 aaKnown RBP13.03□□□□□ -0.32
C9orf43-201ENST00000288462 LTV1Q96GA3 475 aaPredicted RBP13.02□□□□□ -0.33
C9orf43-201ENST00000288462 NPHP3Q7Z494 1330 aa13.02□□□□□ -0.33
C9orf43-201ENST00000288462 VIRMAQ69YN4 1812 aaKnown RBP13.02□□□□□ -0.33
C9orf43-201ENST00000288462 ARHGAP45Q92619 1136 aa13.01□□□□□ -0.33
C9orf43-201ENST00000288462 IGHDP01880 384 aa13.01□□□□□ -0.33
C9orf43-201ENST00000288462 RTF1Q92541 710 aaKnown RBP13.01□□□□□ -0.33
C9orf43-201ENST00000288462 DDX19BQ9UMR2 479 aa13.01□□□□□ -0.33
C9orf43-201ENST00000288462 NBPF6Q5VWK0 638 aa13□□□□□ -0.33
C9orf43-201ENST00000288462 NBPF4Q96M43 638 aa13□□□□□ -0.33
C9orf43-201ENST00000288462 KDM3BQ7LBC6 1761 aa13□□□□□ -0.33
C9orf43-201ENST00000288462 GNAT3A8MTJ3 354 aa13□□□□□ -0.33
C9orf43-201ENST00000288462 HAP1P54257 671 aaPredicted RBP13□□□□□ -0.33
C9orf43-201ENST00000288462 USHBP1Q8N6Y0 703 aa13□□□□□ -0.33
C9orf43-201ENST00000288462 PCDHB15Q9Y5E8 787 aa13□□□□□ -0.33
C9orf43-201ENST00000288462 ABCC4O15439 1325 aa12.99□□□□□ -0.33
C9orf43-201ENST00000288462 SKAP1Q86WV1 359 aa12.99□□□□□ -0.33
C9orf43-201ENST00000288462 TMEM57Q8N5G2 664 aa12.99□□□□□ -0.33
C9orf43-201ENST00000288462 ADAMTS7Q9UKP4 1686 aa12.99□□□□□ -0.33
C9orf43-201ENST00000288462 ABCA3Q99758 1704 aa12.99□□□□□ -0.33
C9orf43-201ENST00000288462 LMOD2Q6P5Q4 547 aa12.98□□□□□ -0.33
C9orf43-201ENST00000288462 NHSL1Q5SYE7 1610 aa12.98□□□□□ -0.33
C9orf43-201ENST00000288462 ZNF335Q9H4Z2 1342 aaPredicted RBP12.98□□□□□ -0.33
C9orf43-201ENST00000288462 ELL2O00472 640 aaPredicted RBP12.98□□□□□ -0.33
C9orf43-201ENST00000288462 ITPRIPQ8IWB1 547 aa12.98□□□□□ -0.33
C9orf43-201ENST00000288462 CEMIPQ8WUJ3 1361 aa12.97□□□□□ -0.33
C9orf43-201ENST00000288462 DDX17Q92841 729 aaKnown RBP12.97□□□□□ -0.33
C9orf43-201ENST00000288462 OVOS2A0A0G2JMS6 1433 aa12.97□□□□□ -0.33
C9orf43-201ENST00000288462 RGS12O14924 1447 aa12.97□□□□□ -0.33
C9orf43-201ENST00000288462 SPATA31A3Q5VYP0 1347 aa12.97□□□□□ -0.33
C9orf43-201ENST00000288462 ZBTB7CA1YPR0 619 aa12.97□□□□□ -0.33
C9orf43-201ENST00000288462 KRT24Q2M2I5 525 aa12.97□□□□□ -0.33
C9orf43-201ENST00000288462 ANKRD24Q8TF21 1146 aa12.97□□□□□ -0.33
C9orf43-201ENST00000288462 LRRC59Q96AG4 307 aaKnown RBP12.97□□□□□ -0.33
C9orf43-201ENST00000288462 BABAM1Q9NWV8 329 aa12.97□□□□□ -0.33
C9orf43-201ENST00000288462 CACNA1FO60840 1977 aa12.96□□□□□ -0.33
C9orf43-201ENST00000288462 BRINP3Q76B58 766 aa12.96□□□□□ -0.33
C9orf43-201ENST00000288462 ZBTB40Q9NUA8 1239 aa12.96□□□□□ -0.33
C9orf43-201ENST00000288462 TSPYL4Q9UJ04 414 aa12.96□□□□□ -0.33
C9orf43-201ENST00000288462 SIPA1L3O60292 1781 aaPredicted RBP12.96□□□□□ -0.33
C9orf43-201ENST00000288462 N4BP2Q86UW6 1770 aaPredicted RBP12.96□□□□□ -0.33
C9orf43-201ENST00000288462 ERBB3P21860 1342 aa12.96□□□□□ -0.34
C9orf43-201ENST00000288462 IL17REQ8NFR9 667 aa12.95□□□□□ -0.34
C9orf43-201ENST00000288462 AXIN2Q9Y2T1 843 aa12.95□□□□□ -0.34
C9orf43-201ENST00000288462 PDE4AP27815 886 aa12.95□□□□□ -0.34
C9orf43-201ENST00000288462 BACH2Q9BYV9 841 aa12.95□□□□□ -0.34
C9orf43-201ENST00000288462 API5Q9BZZ5 524 aaKnown RBP12.95□□□□□ -0.34
C9orf43-201ENST00000288462 CPDO75976 1380 aa12.95□□□□□ -0.34
C9orf43-201ENST00000288462 HDAC1Q13547 482 aaPredicted RBP12.94□□□□□ -0.34
C9orf43-201ENST00000288462 RWDD1Q9H446 243 aaPredicted RBP12.94□□□□□ -0.34
C9orf43-201ENST00000288462 PLEKHG2Q9H7P9 1386 aa12.94□□□□□ -0.34
C9orf43-201ENST00000288462 SOS1Q07889 1333 aaPredicted RBP12.94□□□□□ -0.34
C9orf43-201ENST00000288462 PKD1L3Q7Z443 1732 aa12.94□□□□□ -0.34
C9orf43-201ENST00000288462 MIS18AQ9NYP9 233 aa12.93□□□□□ -0.34
C9orf43-201ENST00000288462 AMOTQ4VCS5 1084 aa12.92□□□□□ -0.34
C9orf43-201ENST00000288462 CHMP4BQ9H444 224 aaKnown RBP12.92□□□□□ -0.34
C9orf43-201ENST00000288462 PTPRCP08575 1304 aa12.92□□□□□ -0.34
C9orf43-201ENST00000288462 SOS2Q07890 1332 aaPredicted RBP12.92□□□□□ -0.34
C9orf43-201ENST00000288462 PLEKHG5O94827 1062 aa12.92□□□□□ -0.34
C9orf43-201ENST00000288462 ZC3H6P61129 1189 aaKnown RBP12.92□□□□□ -0.34
C9orf43-201ENST00000288462 TAF7Q15545 349 aaPredicted RBP12.92□□□□□ -0.34
C9orf43-201ENST00000288462 PLEKHO1Q53GL0 409 aaPredicted RBP12.92□□□□□ -0.34
C9orf43-201ENST00000288462 AKAP4Q5JQC9 854 aa12.92□□□□□ -0.34
C9orf43-201ENST00000288462 SCN11AQ9UI33 1791 aa12.92□□□□□ -0.34
C9orf43-201ENST00000288462 ZBTB7BO15156 539 aaPredicted RBP12.91□□□□□ -0.34
C9orf43-201ENST00000288462 ZNF530Q6P9A1 599 aaPredicted RBP12.91□□□□□ -0.34
C9orf43-201ENST00000288462 SLAIN2Q9P270 581 aa12.91□□□□□ -0.34
C9orf43-201ENST00000288462 RGS3P49796 1198 aa12.9□□□□□ -0.34
C9orf43-201ENST00000288462 INTS3Q68E01 1043 aaKnown RBP12.9□□□□□ -0.34
C9orf43-201ENST00000288462 MEGF6O75095 1541 aa12.89□□□□□ -0.35
C9orf43-201ENST00000288462 PARP4Q9UKK3 1724 aaKnown RBP12.89□□□□□ -0.35
C9orf43-201ENST00000288462 SMC5Q8IY18 1101 aa12.89□□□□□ -0.35
C9orf43-201ENST00000288462 CABLES1Q8TDN4 633 aa12.89□□□□□ -0.35
C9orf43-201ENST00000288462 PDZRN3Q9UPQ7 1066 aa12.89□□□□□ -0.35
C9orf43-201ENST00000288462 FAM161AQ3B820 660 aa12.88□□□□□ -0.35
C9orf43-201ENST00000288462 C8orf34Q49A92 452 aa12.88□□□□□ -0.35
C9orf43-201ENST00000288462 LGR6Q9HBX8 967 aa12.88□□□□□ -0.35
C9orf43-201ENST00000288462 PXDNLA1KZ92 1463 aa12.87□□□□□ -0.35
C9orf43-201ENST00000288462 SLC4A2P04920 1241 aa12.87□□□□□ -0.35
C9orf43-201ENST00000288462 C1orf141Q5JVX7 400 aa12.87□□□□□ -0.35
C9orf43-201ENST00000288462 MRC1P22897 1456 aa12.87□□□□□ -0.35
C9orf43-201ENST00000288462 RNMTO43148 476 aaKnown RBP12.86□□□□□ -0.35
C9orf43-201ENST00000288462 CCDC30Q5VVM6 783 aa12.86□□□□□ -0.35
C9orf43-201ENST00000288462 ATP10DQ9P241 1426 aa12.86□□□□□ -0.35
C9orf43-201ENST00000288462 HOXB7P09629 217 aa12.85□□□□□ -0.35
C9orf43-201ENST00000288462 G2E3Q7L622 706 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms