RNA–Protein interactions for RNA: ENST00000284073.6

MSI2-201, Transcript of musashi RNA binding protein 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene MSI2, Length 6,364 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-201ENST00000284073 SYCP1Q15431 976 aa18.55■□□□□ 0.56
MSI2-201ENST00000284073 CEP135Q66GS9 1140 aa18.55■□□□□ 0.56
MSI2-201ENST00000284073 STIM1Q13586 685 aa18.55■□□□□ 0.56
MSI2-201ENST00000284073 WDR63Q8IWG1 891 aa18.54■□□□□ 0.56
MSI2-201ENST00000284073 CCDC113Q9H0I3 377 aa18.54■□□□□ 0.56
MSI2-201ENST00000284073 MAP2K1Q02750 393 aaPredicted RBP18.54■□□□□ 0.56
MSI2-201ENST00000284073 ERCC6Q03468 1493 aa18.54■□□□□ 0.56
MSI2-201ENST00000284073 ZSWIM4Q9H7M6 989 aa18.54■□□□□ 0.56
MSI2-201ENST00000284073 WIZO95785 1651 aa18.54■□□□□ 0.56
MSI2-201ENST00000284073 KRT18P05783 430 aaKnown RBP18.54■□□□□ 0.56
MSI2-201ENST00000284073 MAP9Q49MG5 647 aa18.54■□□□□ 0.56
MSI2-201ENST00000284073 DNAAF4Q8WXU2 420 aa18.54■□□□□ 0.56
MSI2-201ENST00000284073 LARP6Q9BRS8 491 aaKnown RBP18.54■□□□□ 0.56
MSI2-201ENST00000284073 EIF5P55010 431 aaKnown RBP18.53■□□□□ 0.56
MSI2-201ENST00000284073 IRX3P78415 501 aaPredicted RBP18.53■□□□□ 0.56
MSI2-201ENST00000284073 ANO10Q9NW15 660 aa18.53■□□□□ 0.56
MSI2-201ENST00000284073 SMARCA5O60264 1052 aaPredicted RBP18.53■□□□□ 0.56
MSI2-201ENST00000284073 NOLC1Q14978 699 aaKnown RBP eCLIP18.53■□□□□ 0.56
MSI2-201ENST00000284073 TOP1P11387 765 aaKnown RBP18.53■□□□□ 0.56
MSI2-201ENST00000284073 KLHL40Q2TBA0 621 aa18.52■□□□□ 0.56
MSI2-201ENST00000284073 ZHX3Q9H4I2 956 aa18.52■□□□□ 0.56
MSI2-201ENST00000284073 BCCIPQ9P287 314 aaKnown RBP eCLIP18.52■□□□□ 0.563e-6■□□□□ 10.4
MSI2-201ENST00000284073 CTDP1Q9Y5B0 961 aaPredicted RBP18.52■□□□□ 0.56
MSI2-201ENST00000284073 SNW1Q13573 536 aaKnown RBP18.52■□□□□ 0.55
MSI2-201ENST00000284073 NACADO15069 1562 aa18.52■□□□□ 0.55
MSI2-201ENST00000284073 ERC1Q8IUD2 1116 aa18.51■□□□□ 0.55
MSI2-201ENST00000284073 SRRTQ9BXP5 876 aaKnown RBP18.51■□□□□ 0.55
MSI2-201ENST00000284073 FAM107BQ9H098 131 aa18.51■□□□□ 0.55
MSI2-201ENST00000284073 HCLS1P14317 486 aaPredicted RBP18.51■□□□□ 0.55
MSI2-201ENST00000284073 CPLX3Q8WVH0 158 aa18.51■□□□□ 0.55
MSI2-201ENST00000284073 ZBTB9Q96C00 473 aa18.51■□□□□ 0.55
MSI2-201ENST00000284073 CCDC94Q9BW85 323 aaPredicted RBP18.51■□□□□ 0.55
MSI2-201ENST00000284073 DNA2P51530 1060 aa18.51■□□□□ 0.55
MSI2-201ENST00000284073 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.51■□□□□ 0.55
MSI2-201ENST00000284073 TBC1D2BQ9UPU7 963 aa18.51■□□□□ 0.55
MSI2-201ENST00000284073 V9GYY5 206 aaPredicted RBP18.51■□□□□ 0.55
MSI2-201ENST00000284073 FAM177BA6PVY3 158 aa18.5■□□□□ 0.55
MSI2-201ENST00000284073 NUTM1Q86Y26 1132 aa18.5■□□□□ 0.55
MSI2-201ENST00000284073 TMC6Q7Z403 805 aa18.5■□□□□ 0.55
MSI2-201ENST00000284073 TAF4BQ92750 862 aa18.5■□□□□ 0.55
MSI2-201ENST00000284073 KLHL10Q6JEL2 608 aa18.5■□□□□ 0.55
MSI2-201ENST00000284073 TRIM22Q8IYM9 498 aa18.5■□□□□ 0.55
MSI2-201ENST00000284073 EXOC6BQ9Y2D4 811 aa18.5■□□□□ 0.55
MSI2-201ENST00000284073 CCT4P50991 539 aaKnown RBP18.5■□□□□ 0.55
MSI2-201ENST00000284073 TXLNBQ8N3L3 684 aa18.5■□□□□ 0.55
MSI2-201ENST00000284073 SEPT11Q9NVA2 429 aaKnown RBP18.5■□□□□ 0.55
MSI2-201ENST00000284073 RSPH14Q9UHP6 348 aa18.5■□□□□ 0.55
MSI2-201ENST00000284073 GTPBP4Q9BZE4 634 aaKnown RBP18.49■□□□□ 0.55
MSI2-201ENST00000284073 CTR9Q6PD62 1173 aa18.49■□□□□ 0.55
MSI2-201ENST00000284073 NUP133Q8WUM0 1156 aa18.49■□□□□ 0.55
MSI2-201ENST00000284073 SRCIN1Q9C0H9 1055 aa18.49■□□□□ 0.55
MSI2-201ENST00000284073 MICALCLQ6ZW33 695 aa18.49■□□□□ 0.55
MSI2-201ENST00000284073 NUTM2GQ5VZR2 741 aa18.49■□□□□ 0.55
MSI2-201ENST00000284073 AACSQ86V21 672 aa18.49■□□□□ 0.55
MSI2-201ENST00000284073 PAXBP1Q9Y5B6 917 aa18.49■□□□□ 0.55
MSI2-201ENST00000284073 SCAND2PQ9GZW5 306 aaPredicted RBP18.48■□□□□ 0.55
MSI2-201ENST00000284073 TBC1D32Q96NH3 1257 aa18.48■□□□□ 0.55
MSI2-201ENST00000284073 RRAGDQ9NQL2 400 aaPredicted RBP18.48■□□□□ 0.55
MSI2-201ENST00000284073 LIG1P18858 919 aa18.47■□□□□ 0.55
MSI2-201ENST00000284073 TFIP11Q9UBB9 837 aaKnown RBP18.47■□□□□ 0.55
MSI2-201ENST00000284073 PRPF40BQ6NWY9 871 aaKnown RBP18.47■□□□□ 0.55
MSI2-201ENST00000284073 LRSAM1Q6UWE0 723 aa18.47■□□□□ 0.55
MSI2-201ENST00000284073 TTC12Q9H892 705 aaPredicted RBP18.47■□□□□ 0.55
MSI2-201ENST00000284073 SLC12A5Q9H2X9 1139 aa18.47■□□□□ 0.55
MSI2-201ENST00000284073 GUCY1B3Q02153 619 aa18.47■□□□□ 0.55
MSI2-201ENST00000284073 CFAP70Q5T0N1 1121 aa18.47■□□□□ 0.55
MSI2-201ENST00000284073 GIMAP6Q6P9H5 292 aa18.47■□□□□ 0.55
MSI2-201ENST00000284073 SYTL4Q96C24 671 aaPredicted RBP18.47■□□□□ 0.55
MSI2-201ENST00000284073 ZKSCAN5Q9Y2L8 839 aa18.47■□□□□ 0.55
MSI2-201ENST00000284073 MYOM3Q5VTT5 1437 aa18.47■□□□□ 0.55
MSI2-201ENST00000284073 SRGAP3O43295 1099 aa18.46■□□□□ 0.55
MSI2-201ENST00000284073 NEMFO60524 1076 aa18.46■□□□□ 0.55
MSI2-201ENST00000284073 CCDC69A6NI79 296 aa18.46■□□□□ 0.55
MSI2-201ENST00000284073 BIN1O00499 593 aa18.46■□□□□ 0.55
MSI2-201ENST00000284073 ATP2C2O75185 946 aa18.46■□□□□ 0.55
MSI2-201ENST00000284073 KIF21BO75037 1637 aa18.46■□□□□ 0.55
MSI2-201ENST00000284073 SLC26A8Q96RN1 970 aa18.46■□□□□ 0.55
MSI2-201ENST00000284073 TTC39AQ5SRH9 613 aa18.45■□□□□ 0.54
MSI2-201ENST00000284073 IGHDP01880 384 aa18.45■□□□□ 0.54
MSI2-201ENST00000284073 MCM3P25205 808 aa18.45■□□□□ 0.54
MSI2-201ENST00000284073 ZNF165P49910 485 aa18.45■□□□□ 0.54
MSI2-201ENST00000284073 ANKRD18AQ8IVF6 992 aa18.45■□□□□ 0.54
MSI2-201ENST00000284073 IFFO1Q0D2I5 559 aa18.45■□□□□ 0.54
MSI2-201ENST00000284073 SPA17Q15506 151 aa18.44■□□□□ 0.54
MSI2-201ENST00000284073 HDGFL1Q5TGJ6 251 aa18.44■□□□□ 0.54
MSI2-201ENST00000284073 EZRP15311 586 aaKnown RBP18.44■□□□□ 0.54
MSI2-201ENST00000284073 ZNF526Q8TF50 670 aaPredicted RBP18.44■□□□□ 0.54
MSI2-201ENST00000284073 LUZP1Q86V48 1076 aa18.44■□□□□ 0.54
MSI2-201ENST00000284073 LRRC9Q6ZRR7 1453 aa18.44■□□□□ 0.54
MSI2-201ENST00000284073 GSDMDP57764 484 aa18.44■□□□□ 0.54
MSI2-201ENST00000284073 UVSSAQ2YD98 709 aa18.44■□□□□ 0.54
MSI2-201ENST00000284073 RARSP54136 660 aaKnown RBP18.43■□□□□ 0.54
MSI2-201ENST00000284073 GBP2P32456 591 aaPredicted RBP18.43■□□□□ 0.54
MSI2-201ENST00000284073 GNG11P61952 73 aa18.43■□□□□ 0.54
MSI2-201ENST00000284073 RPAP2Q8IXW5 612 aaPredicted RBP18.43■□□□□ 0.54
MSI2-201ENST00000284073 IKQ13123 557 aaPredicted RBP18.43■□□□□ 0.54
MSI2-201ENST00000284073 IMMTQ16891 758 aaKnown RBP18.43■□□□□ 0.54
MSI2-201ENST00000284073 GOPCQ9HD26 462 aa18.43■□□□□ 0.54
MSI2-201ENST00000284073 NF2P35240 595 aa18.43■□□□□ 0.54
MSI2-201ENST00000284073 RNF216Q9NWF9 866 aaPredicted RBP18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms