RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 IGSF1Q8N6C5 1336 aa22.77■■□□□ 1.24
CAPN1-201ENST00000279247 ARHGEF10O15013 1369 aa22.77■■□□□ 1.24
CAPN1-201ENST00000279247 ZBTB47Q9UFB7 747 aaPredicted RBP22.77■■□□□ 1.24
CAPN1-201ENST00000279247 KRT28Q7Z3Y7 464 aa22.76■■□□□ 1.23
CAPN1-201ENST00000279247 CHL1O00533 1208 aa22.75■■□□□ 1.23
CAPN1-201ENST00000279247 ZBTB40Q9NUA8 1239 aa22.74■■□□□ 1.23
CAPN1-201ENST00000279247 GAS2L2Q8NHY3 880 aa22.74■■□□□ 1.23
CAPN1-201ENST00000279247 CABLES1Q8TDN4 633 aa22.74■■□□□ 1.23
CAPN1-201ENST00000279247 C1orf167Q5SNV9 1468 aa22.73■■□□□ 1.23
CAPN1-201ENST00000279247 ZC3H6P61129 1189 aaKnown RBP22.73■■□□□ 1.23
CAPN1-201ENST00000279247 NBPF6Q5VWK0 638 aa22.73■■□□□ 1.23
CAPN1-201ENST00000279247 NBPF4Q96M43 638 aa22.73■■□□□ 1.23
CAPN1-201ENST00000279247 ZNF428Q96B54 188 aa22.72■■□□□ 1.23
CAPN1-201ENST00000279247 NWD1Q149M9 1564 aa22.72■■□□□ 1.23
CAPN1-201ENST00000279247 GCP02774 474 aa22.72■■□□□ 1.23
CAPN1-201ENST00000279247 AAMPQ13685 434 aa22.71■■□□□ 1.23
CAPN1-201ENST00000279247 SLC4A3P48751 1232 aa22.71■■□□□ 1.23
CAPN1-201ENST00000279247 GNAT3A8MTJ3 354 aa22.7■■□□□ 1.22
CAPN1-201ENST00000279247 SLC4A2P04920 1241 aa22.7■■□□□ 1.22
CAPN1-201ENST00000279247 IP6K1Q92551 441 aa22.7■■□□□ 1.22
CAPN1-201ENST00000279247 KDRP35968 1356 aa22.69■■□□□ 1.22
CAPN1-201ENST00000279247 CADPS2Q86UW7 1296 aa22.68■■□□□ 1.22
CAPN1-201ENST00000279247 MSH6P52701 1360 aa22.68■■□□□ 1.22
CAPN1-201ENST00000279247 RGPD1P0DJD0 1748 aa22.68■■□□□ 1.22
CAPN1-201ENST00000279247 NBR1Q14596 966 aa22.68■■□□□ 1.22
CAPN1-201ENST00000279247 SLC4A10Q6U841 1118 aa22.68■■□□□ 1.22
CAPN1-201ENST00000279247 SEC24BO95487 1268 aa22.68■■□□□ 1.22
CAPN1-201ENST00000279247 LNPKQ9C0E8 428 aa22.68■■□□□ 1.22
CAPN1-201ENST00000279247 ZBTB7BO15156 539 aaPredicted RBP22.67■■□□□ 1.22
CAPN1-201ENST00000279247 KCNH5Q8NCM2 988 aa22.67■■□□□ 1.22
CAPN1-201ENST00000279247 IL17REQ8NFR9 667 aa22.67■■□□□ 1.22
CAPN1-201ENST00000279247 MST1RQ04912 1400 aa22.67■■□□□ 1.22
CAPN1-201ENST00000279247 CRB1P82279 1406 aa22.66■■□□□ 1.22
CAPN1-201ENST00000279247 API5Q9BZZ5 524 aaKnown RBP22.66■■□□□ 1.22
CAPN1-201ENST00000279247 MARF1Q9Y4F3 1742 aaKnown RBP22.66■■□□□ 1.22
CAPN1-201ENST00000279247 F6X3S4 739 aa22.65■■□□□ 1.22
CAPN1-201ENST00000279247 G2E3Q7L622 706 aa22.65■■□□□ 1.22
CAPN1-201ENST00000279247 AXIN2Q9Y2T1 843 aa22.64■■□□□ 1.22
CAPN1-201ENST00000279247 ARHGAP45Q92619 1136 aa22.64■■□□□ 1.21
CAPN1-201ENST00000279247 LTN1O94822 1766 aa22.63■■□□□ 1.21
CAPN1-201ENST00000279247 BRPF1P55201 1214 aaPredicted RBP22.63■■□□□ 1.21
CAPN1-201ENST00000279247 HDAC1Q13547 482 aaPredicted RBP22.63■■□□□ 1.21
CAPN1-201ENST00000279247 LGR6Q9HBX8 967 aa22.63■■□□□ 1.21
CAPN1-201ENST00000279247 BRINP3Q76B58 766 aa22.63■■□□□ 1.21
CAPN1-201ENST00000279247 SLAIN2Q9P270 581 aa22.63■■□□□ 1.21
CAPN1-201ENST00000279247 ABCC4O15439 1325 aa22.62■■□□□ 1.21
CAPN1-201ENST00000279247 MPRIPQ6WCQ1 1025 aa22.62■■□□□ 1.21
CAPN1-201ENST00000279247 APBB1O00213 710 aa22.61■■□□□ 1.21
CAPN1-201ENST00000279247 ANKRD45Q5TZF3 282 aa22.61■■□□□ 1.21
CAPN1-201ENST00000279247 ANKRD24Q8TF21 1146 aa22.61■■□□□ 1.21
CAPN1-201ENST00000279247 MAP3K5Q99683 1374 aa22.61■■□□□ 1.21
CAPN1-201ENST00000279247 ZNF530Q6P9A1 599 aaPredicted RBP22.6■■□□□ 1.21
CAPN1-201ENST00000279247 ARHGEF25Q86VW2 580 aa22.6■■□□□ 1.21
CAPN1-201ENST00000279247 EIF2S2P20042 333 aaKnown RBP22.59■■□□□ 1.21
CAPN1-201ENST00000279247 HAP1P54257 671 aaPredicted RBP22.58■■□□□ 1.21
CAPN1-201ENST00000279247 CHRNA2Q15822 529 aa22.58■■□□□ 1.21
CAPN1-201ENST00000279247 STK31Q9BXU1 1019 aa22.58■■□□□ 1.21
CAPN1-201ENST00000279247 SIRT2Q8IXJ6 389 aa22.57■■□□□ 1.2
CAPN1-201ENST00000279247 DAXXQ9UER7 740 aaPredicted RBP22.57■■□□□ 1.2
CAPN1-201ENST00000279247 KIF24Q5T7B8 1368 aa22.57■■□□□ 1.2
CAPN1-201ENST00000279247 TAF7Q15545 349 aaPredicted RBP22.57■■□□□ 1.2
CAPN1-201ENST00000279247 SMC5Q8IY18 1101 aa22.57■■□□□ 1.2
CAPN1-201ENST00000279247 NFAT5O94916 1531 aa22.57■■□□□ 1.2
CAPN1-201ENST00000279247 KIAA0232Q92628 1395 aa22.56■■□□□ 1.2
CAPN1-201ENST00000279247 FKBP5Q13451 457 aaPredicted RBP22.56■■□□□ 1.2
CAPN1-201ENST00000279247 NLRP2Q9NX02 1062 aa22.56■■□□□ 1.2
CAPN1-201ENST00000279247 RTL1A6NKG5 1358 aa22.56■■□□□ 1.2
CAPN1-201ENST00000279247 XIRP1Q702N8 1843 aaKnown RBP22.56■■□□□ 1.2
CAPN1-201ENST00000279247 MEIS3Q99687 375 aa22.56■■□□□ 1.2
CAPN1-201ENST00000279247 KCNQ3O43525 872 aa22.55■■□□□ 1.2
CAPN1-201ENST00000279247 RGPD2P0DJD1 1756 aa22.55■■□□□ 1.2
CAPN1-201ENST00000279247 CSB-PGBD3P0DP91 1061 aa22.55■■□□□ 1.2
CAPN1-201ENST00000279247 TEFQ10587 303 aa22.54■■□□□ 1.2
CAPN1-201ENST00000279247 NPHP3Q7Z494 1330 aa22.53■■□□□ 1.2
CAPN1-201ENST00000279247 CHMP4BQ9H444 224 aaKnown RBP22.53■■□□□ 1.2
CAPN1-201ENST00000279247 CHD1LQ86WJ1 897 aa22.53■■□□□ 1.2
CAPN1-201ENST00000279247 HTATSF1O43719 755 aaKnown RBP22.52■■□□□ 1.2
CAPN1-201ENST00000279247 ANXA1P04083 346 aa22.52■■□□□ 1.2
CAPN1-201ENST00000279247 C1orf141Q5JVX7 400 aa22.52■■□□□ 1.2
CAPN1-201ENST00000279247 PLEKHO1Q53GL0 409 aaPredicted RBP22.52■■□□□ 1.19
CAPN1-201ENST00000279247 NUCB1Q02818 461 aa22.51■■□□□ 1.19
CAPN1-201ENST00000279247 MFAP1P55081 439 aaKnown RBP22.51■■□□□ 1.19
CAPN1-201ENST00000279247 HDGFL1Q5TGJ6 251 aa22.51■■□□□ 1.19
CAPN1-201ENST00000279247 DDRGK1Q96HY6 314 aa22.51■■□□□ 1.19
CAPN1-201ENST00000279247 CCDC30Q5VVM6 783 aa22.5■■□□□ 1.19
CAPN1-201ENST00000279247 INTS3Q68E01 1043 aaKnown RBP22.5■■□□□ 1.19
CAPN1-201ENST00000279247 FLIIQ13045 1269 aa22.5■■□□□ 1.19
CAPN1-201ENST00000279247 RGS12O14924 1447 aa22.49■■□□□ 1.19
CAPN1-201ENST00000279247 PTPRCP08575 1304 aa22.49■■□□□ 1.19
CAPN1-201ENST00000279247 PHAXQ9H814 394 aaKnown RBP22.49■■□□□ 1.19
CAPN1-201ENST00000279247 BTBD11A6QL63 1104 aa22.48■■□□□ 1.19
CAPN1-201ENST00000279247 UPF2Q9HAU5 1272 aaKnown RBP22.47■■□□□ 1.19
CAPN1-201ENST00000279247 USP19O94966 1318 aa22.47■■□□□ 1.19
CAPN1-201ENST00000279247 DCCP43146 1447 aa22.47■■□□□ 1.19
CAPN1-201ENST00000279247 ERBB3P21860 1342 aa22.45■■□□□ 1.18
CAPN1-201ENST00000279247 SPATA31A3Q5VYP0 1347 aa22.45■■□□□ 1.18
CAPN1-201ENST00000279247 AKAP4Q5JQC9 854 aa22.45■■□□□ 1.18
CAPN1-201ENST00000279247 GCC1Q96CN9 775 aa22.45■■□□□ 1.18
CAPN1-201ENST00000279247 NCOA3Q9Y6Q9 1424 aa22.45■■□□□ 1.18
CAPN1-201ENST00000279247 SMARCA5O60264 1052 aaPredicted RBP22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms