RNA–Protein interactions for RNA: ENST00000277537.10

SEC16A-201, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 3,910 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-201ENST00000277537 FAM135BQ49AJ0 1406 aa11.13□□□□□ -0.63
SEC16A-201ENST00000277537 ATP7BP35670 1465 aa11.13□□□□□ -0.63
SEC16A-201ENST00000277537 KIAA1210Q9ULL0 1709 aa11.13□□□□□ -0.63
SEC16A-201ENST00000277537 ARHGEF40Q8TER5 1519 aa11.13□□□□□ -0.63
SEC16A-201ENST00000277537 RIC3Q7Z5B4 369 aa11.13□□□□□ -0.63
SEC16A-201ENST00000277537 IL27Q8NEV9 243 aa11.13□□□□□ -0.63
SEC16A-201ENST00000277537 GCC1Q96CN9 775 aa11.13□□□□□ -0.63
SEC16A-201ENST00000277537 EXOC6BQ9Y2D4 811 aa11.13□□□□□ -0.63
SEC16A-201ENST00000277537 PPLO60437 1756 aa11.13□□□□□ -0.63
SEC16A-201ENST00000277537 GNAI2P04899 355 aa11.13□□□□□ -0.63
SEC16A-201ENST00000277537 SURF6O75683 361 aaKnown RBP11.13□□□□□ -0.63
SEC16A-201ENST00000277537 KDM2BQ8NHM5 1336 aa11.12□□□□□ -0.63
SEC16A-201ENST00000277537 TMEM131LA2VDJ0 1609 aa11.12□□□□□ -0.63
SEC16A-201ENST00000277537 GNAI3P08754 354 aa11.12□□□□□ -0.63
SEC16A-201ENST00000277537 FLIIQ13045 1269 aa11.12□□□□□ -0.63
SEC16A-201ENST00000277537 MEIS3Q99687 375 aa11.12□□□□□ -0.63
SEC16A-201ENST00000277537 USP6P35125 1406 aa11.12□□□□□ -0.63
SEC16A-201ENST00000277537 CCT4P50991 539 aaKnown RBP11.12□□□□□ -0.63
SEC16A-201ENST00000277537 NEXNQ0ZGT2 675 aa11.12□□□□□ -0.63
SEC16A-201ENST00000277537 CADPS2Q86UW7 1296 aa11.12□□□□□ -0.63
SEC16A-201ENST00000277537 NBPF6Q5VWK0 638 aa11.11□□□□□ -0.63
SEC16A-201ENST00000277537 NBPF4Q96M43 638 aa11.11□□□□□ -0.63
SEC16A-201ENST00000277537 ZBTB40Q9NUA8 1239 aa11.11□□□□□ -0.63
SEC16A-201ENST00000277537 NCLP19338 710 aaKnown RBP11.11□□□□□ -0.63
SEC16A-201ENST00000277537 G2E3Q7L622 706 aa11.11□□□□□ -0.63
SEC16A-201ENST00000277537 SBNO1A3KN83 1393 aa11.11□□□□□ -0.63
SEC16A-201ENST00000277537 SRCIN1Q9C0H9 1055 aa11.11□□□□□ -0.63
SEC16A-201ENST00000277537 SIGLEC1Q9BZZ2 1709 aa11.1□□□□□ -0.63
SEC16A-201ENST00000277537 DDX58O95786 925 aaKnown RBP11.1□□□□□ -0.63
SEC16A-201ENST00000277537 C8orf34Q49A92 452 aa11.1□□□□□ -0.63
SEC16A-201ENST00000277537 IP6K1Q92551 441 aa11.1□□□□□ -0.63
SEC16A-201ENST00000277537 IL1RAPL2Q9NP60 686 aa11.1□□□□□ -0.63
SEC16A-201ENST00000277537 ZC3H13Q5T200 1668 aaKnown RBP11.1□□□□□ -0.63
SEC16A-201ENST00000277537 CABP4P57796 275 aa11.1□□□□□ -0.63
SEC16A-201ENST00000277537 GZF1Q9H116 711 aaPredicted RBP11.1□□□□□ -0.63
SEC16A-201ENST00000277537 LGR6Q9HBX8 967 aa11.1□□□□□ -0.63
SEC16A-201ENST00000277537 CHL1O00533 1208 aa11.09□□□□□ -0.63
SEC16A-201ENST00000277537 SEC24BO95487 1268 aa11.09□□□□□ -0.63
SEC16A-201ENST00000277537 SLC39A6Q13433 755 aa11.09□□□□□ -0.63
SEC16A-201ENST00000277537 SPG7Q9UQ90 795 aa11.09□□□□□ -0.63
SEC16A-201ENST00000277537 ADAMTS13Q76LX8 1427 aa11.09□□□□□ -0.63
SEC16A-201ENST00000277537 AATKQ6ZMQ8 1374 aa11.09□□□□□ -0.63
SEC16A-201ENST00000277537 PTCD1O75127 700 aaKnown RBP11.09□□□□□ -0.63
SEC16A-201ENST00000277537 AMOTQ4VCS5 1084 aa11.09□□□□□ -0.63
SEC16A-201ENST00000277537 KIAA1211Q6ZU35 1233 aa11.09□□□□□ -0.63
SEC16A-201ENST00000277537 ARHGAP45Q92619 1136 aa11.09□□□□□ -0.63
SEC16A-201ENST00000277537 PHF23Q9BUL5 403 aaPredicted RBP11.09□□□□□ -0.63
SEC16A-201ENST00000277537 RPAP2Q8IXW5 612 aaPredicted RBP11.08□□□□□ -0.64
SEC16A-201ENST00000277537 ZBTB7BO15156 539 aaPredicted RBP11.08□□□□□ -0.64
SEC16A-201ENST00000277537 SRGAP3O43295 1099 aa11.08□□□□□ -0.64
SEC16A-201ENST00000277537 MCCP23508 829 aa11.08□□□□□ -0.64
SEC16A-201ENST00000277537 HDAC1Q13547 482 aaPredicted RBP11.08□□□□□ -0.64
SEC16A-201ENST00000277537 PIP4K2AP48426 406 aaPredicted RBP11.07□□□□□ -0.64
SEC16A-201ENST00000277537 LRRFIP2Q9Y608 721 aaKnown RBP11.07□□□□□ -0.64
SEC16A-201ENST00000277537 NEURL4Q96JN8 1562 aa11.07□□□□□ -0.64
SEC16A-201ENST00000277537 PI4KAP2A4QPH2 592 aa11.07□□□□□ -0.64
SEC16A-201ENST00000277537 CDC45O75419 566 aa11.07□□□□□ -0.64
SEC16A-201ENST00000277537 TSHZ3Q63HK5 1081 aa11.07□□□□□ -0.64
SEC16A-201ENST00000277537 PI4KAP1Q8N8J0 262 aa11.07□□□□□ -0.64
SEC16A-201ENST00000277537 ANO2Q9NQ90 1003 aa11.07□□□□□ -0.64
SEC16A-201ENST00000277537 CHPF2Q9P2E5 772 aa11.07□□□□□ -0.64
SEC16A-201ENST00000277537 TAOK2Q9UL54 1235 aa11.07□□□□□ -0.64
SEC16A-201ENST00000277537 HDAC5Q9UQL6 1122 aa11.07□□□□□ -0.64
SEC16A-201ENST00000277537 MYO5BQ9ULV0 1848 aa11.07□□□□□ -0.64
SEC16A-201ENST00000277537 NUTM2BA6NNL0 878 aaPredicted RBP11.07□□□□□ -0.64
SEC16A-201ENST00000277537 NUTM2EB1AL46 878 aaPredicted RBP11.07□□□□□ -0.64
SEC16A-201ENST00000277537 MAP4K4O95819 1239 aaPredicted RBP11.07□□□□□ -0.64
SEC16A-201ENST00000277537 NUTM2AQ8IVF1 878 aaPredicted RBP11.07□□□□□ -0.64
SEC16A-201ENST00000277537 C16orf71Q8IYS4 520 aaPredicted RBP11.07□□□□□ -0.64
SEC16A-201ENST00000277537 SPATA31D1Q6ZQQ2 1576 aa11.07□□□□□ -0.64
SEC16A-201ENST00000277537 IL17REQ8NFR9 667 aa11.06□□□□□ -0.64
SEC16A-201ENST00000277537 SIL1Q9H173 461 aa11.06□□□□□ -0.64
SEC16A-201ENST00000277537 PHAXQ9H814 394 aaKnown RBP11.06□□□□□ -0.64
SEC16A-201ENST00000277537 PTPRCP08575 1304 aa11.06□□□□□ -0.64
SEC16A-201ENST00000277537 CPSF1Q10570 1443 aaKnown RBP11.06□□□□□ -0.64
SEC16A-201ENST00000277537 KAT6BQ8WYB5 2073 aa11.06□□□□□ -0.64
SEC16A-201ENST00000277537 SETD1BQ9UPS6 1966 aaKnown RBP11.06□□□□□ -0.64
SEC16A-201ENST00000277537 NPHP3Q7Z494 1330 aa11.06□□□□□ -0.64
SEC16A-201ENST00000277537 MSH6P52701 1360 aa11.06□□□□□ -0.64
SEC16A-201ENST00000277537 FOXD4L5Q5VV16 416 aaPredicted RBP11.06□□□□□ -0.64
SEC16A-201ENST00000277537 FOXD4L4Q8WXT5 416 aaPredicted RBP11.06□□□□□ -0.64
SEC16A-201ENST00000277537 IFIT2P09913 472 aaKnown RBP11.05□□□□□ -0.64
SEC16A-201ENST00000277537 RBM42Q9BTD8 480 aaKnown RBP11.05□□□□□ -0.64
SEC16A-201ENST00000277537 PTPRUQ92729 1446 aa11.05□□□□□ -0.64
SEC16A-201ENST00000277537 PNPLA6Q8IY17 1366 aa11.05□□□□□ -0.64
SEC16A-201ENST00000277537 GOLGA6L22H0YM25 854 aa11.05□□□□□ -0.64
SEC16A-201ENST00000277537 PIP4K2BP78356 416 aa11.05□□□□□ -0.64
SEC16A-201ENST00000277537 G3BP1Q13283 466 aaKnown RBP eCLIP11.05□□□□□ -0.642e-6■■■■□ 21.8
SEC16A-201ENST00000277537 INTS3Q68E01 1043 aaKnown RBP11.05□□□□□ -0.64
SEC16A-201ENST00000277537 LRRCC1Q9C099 1032 aa11.05□□□□□ -0.64
SEC16A-201ENST00000277537 MAP3K5Q99683 1374 aa11.05□□□□□ -0.64
SEC16A-201ENST00000277537 CPS1P31327 1500 aa11.05□□□□□ -0.64
SEC16A-201ENST00000277537 NUCB1Q02818 461 aa11.05□□□□□ -0.64
SEC16A-201ENST00000277537 NFKBIBQ15653 356 aa11.05□□□□□ -0.64
SEC16A-201ENST00000277537 NCBP3Q53F19 620 aaKnown RBP11.05□□□□□ -0.64
SEC16A-201ENST00000277537 TAF7LQ5H9L4 462 aa11.05□□□□□ -0.64
SEC16A-201ENST00000277537 ARHGEF28Q8N1W1 1705 aaKnown RBP11.04□□□□□ -0.64
SEC16A-201ENST00000277537 NPHP4O75161 1426 aaPredicted RBP11.04□□□□□ -0.64
SEC16A-201ENST00000277537 NPHP1O15259 732 aa11.04□□□□□ -0.64
SEC16A-201ENST00000277537 KCNQ3O43525 872 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms