RNA–Protein interactions for RNA: ENST00000276585.8

MRPS28-201, Transcript of mitochondrial ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPS28, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-201ENST00000276585 KCNH5Q8NCM2 988 aa17.55■□□□□ 0.4
MRPS28-201ENST00000276585 IGSF1Q8N6C5 1336 aa17.54■□□□□ 0.4
MRPS28-201ENST00000276585 SYTL4Q96C24 671 aaPredicted RBP17.54■□□□□ 0.4
MRPS28-201ENST00000276585 NLRP2Q9NX02 1062 aa17.54■□□□□ 0.4
MRPS28-201ENST00000276585 C16orf71Q8IYS4 520 aaPredicted RBP17.53■□□□□ 0.4
MRPS28-201ENST00000276585 CABP2Q9NPB3 220 aa17.53■□□□□ 0.4
MRPS28-201ENST00000276585 PCNTO95613 3336 aa17.53■□□□□ 0.4
MRPS28-201ENST00000276585 SBNO2Q9Y2G9 1366 aa17.53■□□□□ 0.4
MRPS28-201ENST00000276585 PIK3C2AO00443 1686 aa17.52■□□□□ 0.39
MRPS28-201ENST00000276585 MON2Q7Z3U7 1717 aa17.51■□□□□ 0.39
MRPS28-201ENST00000276585 RBM46Q8TBY0 533 aaKnown RBP17.51■□□□□ 0.39
MRPS28-201ENST00000276585 NMRK2Q9NPI5 230 aa17.51■□□□□ 0.39
MRPS28-201ENST00000276585 CCNL1Q9UK58 526 aaPredicted RBP17.51■□□□□ 0.39
MRPS28-201ENST00000276585 DDX54Q8TDD1 881 aaKnown RBP17.5■□□□□ 0.39
MRPS28-201ENST00000276585 CABP1Q9NZU7 370 aa17.5■□□□□ 0.39
MRPS28-201ENST00000276585 HSPA1AP0DMV8 641 aaKnown RBP17.47■□□□□ 0.39
MRPS28-201ENST00000276585 HSPA1BP0DMV9 641 aaKnown RBP17.47■□□□□ 0.39
MRPS28-201ENST00000276585 PRIM1P49642 420 aaKnown RBP17.47■□□□□ 0.39
MRPS28-201ENST00000276585 EVC2Q86UK5 1308 aa17.47■□□□□ 0.39
MRPS28-201ENST00000276585 FSTL1Q12841 308 aa17.46■□□□□ 0.39
MRPS28-201ENST00000276585 CARD11Q9BXL7 1154 aa17.46■□□□□ 0.39
MRPS28-201ENST00000276585 PCDH10Q9P2E7 1040 aa17.46■□□□□ 0.39
MRPS28-201ENST00000276585 ERBB3P21860 1342 aa17.46■□□□□ 0.38
MRPS28-201ENST00000276585 FLAD1Q8NFF5 587 aa17.44■□□□□ 0.38
MRPS28-201ENST00000276585 USP54Q70EL1 1684 aa17.44■□□□□ 0.38
MRPS28-201ENST00000276585 CD163L1Q9NR16 1453 aa17.44■□□□□ 0.38
MRPS28-201ENST00000276585 ANKRD36BQ8N2N9 1353 aa17.43■□□□□ 0.38
MRPS28-201ENST00000276585 LY75O60449 1722 aa17.43■□□□□ 0.38
MRPS28-201ENST00000276585 TTC21BQ7Z4L5 1316 aa17.43■□□□□ 0.38
MRPS28-201ENST00000276585 NFAT5O94916 1531 aa17.42■□□□□ 0.38
MRPS28-201ENST00000276585 CICQ96RK0 1608 aaPredicted RBP17.42■□□□□ 0.38
MRPS28-201ENST00000276585 ANKRD24Q8TF21 1146 aa17.41■□□□□ 0.38
MRPS28-201ENST00000276585 USP47Q96K76 1375 aa17.4■□□□□ 0.38
MRPS28-201ENST00000276585 NSD2O96028 1365 aa17.4■□□□□ 0.38
MRPS28-201ENST00000276585 ARHGAP27Q6ZUM4 889 aa17.39■□□□□ 0.37
MRPS28-201ENST00000276585 TESK2Q96S53 571 aa17.39■□□□□ 0.37
MRPS28-201ENST00000276585 PCGF6Q9BYE7 350 aa17.39■□□□□ 0.37
MRPS28-201ENST00000276585 BCS1LQ9Y276 419 aa17.38■□□□□ 0.37
MRPS28-201ENST00000276585 TTC21AQ8NDW8 1320 aa17.38■□□□□ 0.37
MRPS28-201ENST00000276585 CLSPNQ9HAW4 1339 aa17.38■□□□□ 0.37
MRPS28-201ENST00000276585 DOT1LQ8TEK3 1739 aa17.38■□□□□ 0.37
MRPS28-201ENST00000276585 ZNF692Q9BU19 519 aaPredicted RBP17.36■□□□□ 0.37
MRPS28-201ENST00000276585 PHF14O94880 888 aa17.35■□□□□ 0.37
MRPS28-201ENST00000276585 HMGB2P26583 209 aaKnown RBP17.35■□□□□ 0.37
MRPS28-201ENST00000276585 SMC1BQ8NDV3 1235 aa17.35■□□□□ 0.37
MRPS28-201ENST00000276585 KDM2BQ8NHM5 1336 aa17.35■□□□□ 0.37
MRPS28-201ENST00000276585 ST20-MTHFSA0A0A6YYL1 179 aa17.34■□□□□ 0.37
MRPS28-201ENST00000276585 C5P01031 1676 aa17.34■□□□□ 0.37
MRPS28-201ENST00000276585 C9orf131Q5VYM1 1079 aa17.34■□□□□ 0.37
MRPS28-201ENST00000276585 AK7Q96M32 723 aa17.34■□□□□ 0.37
MRPS28-201ENST00000276585 PLEKHG2Q9H7P9 1386 aa17.34■□□□□ 0.37
MRPS28-201ENST00000276585 KTN1Q86UP2 1357 aaKnown RBP17.33■□□□□ 0.36
MRPS28-201ENST00000276585 RRAGCQ9HB90 399 aa17.33■□□□□ 0.36
MRPS28-201ENST00000276585 KCPQ6ZWJ8 1503 aa17.32■□□□□ 0.36
MRPS28-201ENST00000276585 LTN1O94822 1766 aa17.32■□□□□ 0.36
MRPS28-201ENST00000276585 A0A1W2PP64 1363 aa17.31■□□□□ 0.36
MRPS28-201ENST00000276585 LTV1Q96GA3 475 aaPredicted RBP17.31■□□□□ 0.36
MRPS28-201ENST00000276585 PXDNLA1KZ92 1463 aa17.31■□□□□ 0.36
MRPS28-201ENST00000276585 FCHSD2O94868 740 aa17.3■□□□□ 0.36
MRPS28-201ENST00000276585 FAM161AQ3B820 660 aa17.3■□□□□ 0.36
MRPS28-201ENST00000276585 SMIM5Q71RC9 77 aa17.3■□□□□ 0.36
MRPS28-201ENST00000276585 ZCRB1Q8TBF4 217 aaKnown RBP17.3■□□□□ 0.36
MRPS28-201ENST00000276585 PUS7Q96PZ0 661 aaKnown RBP17.3■□□□□ 0.36
MRPS28-201ENST00000276585 TIMELESSQ9UNS1 1208 aa17.3■□□□□ 0.36
MRPS28-201ENST00000276585 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.29■□□□□ 0.36
MRPS28-201ENST00000276585 A0A0G2JLW4 131 aa17.29■□□□□ 0.36
MRPS28-201ENST00000276585 AMIGO3Q86WK7 504 aa17.29■□□□□ 0.36
MRPS28-201ENST00000276585 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.29■□□□□ 0.367e-7■■□□□ 13.8
MRPS28-201ENST00000276585 SLC12A5Q9H2X9 1139 aa17.29■□□□□ 0.36
MRPS28-201ENST00000276585 EDC4Q6P2E9 1401 aaKnown RBP17.29■□□□□ 0.36
MRPS28-201ENST00000276585 USP31Q70CQ4 1352 aa17.28■□□□□ 0.36
MRPS28-201ENST00000276585 C10orf71Q711Q0 1435 aa17.28■□□□□ 0.36
MRPS28-201ENST00000276585 NSD3Q9BZ95 1437 aa17.28■□□□□ 0.36
MRPS28-201ENST00000276585 PALLDQ8WX93 1383 aa17.28■□□□□ 0.36
MRPS28-201ENST00000276585 TGFB2P61812 414 aa17.27■□□□□ 0.36
MRPS28-201ENST00000276585 RNF181Q9P0P0 153 aa17.26■□□□□ 0.35
MRPS28-201ENST00000276585 C4BP0C0L5 1744 aa17.26■□□□□ 0.35
MRPS28-201ENST00000276585 MMP10P09238 476 aa17.25■□□□□ 0.35
MRPS28-201ENST00000276585 NME9Q86XW9 330 aa17.25■□□□□ 0.35
MRPS28-201ENST00000276585 TMC1Q8TDI8 760 aa17.25■□□□□ 0.35
MRPS28-201ENST00000276585 N4BP2Q86UW6 1770 aaPredicted RBP17.25■□□□□ 0.35
MRPS28-201ENST00000276585 TAF1LQ8IZX4 1826 aa17.24■□□□□ 0.35
MRPS28-201ENST00000276585 KIF20BQ96Q89 1820 aa17.24■□□□□ 0.35
MRPS28-201ENST00000276585 SSFA2P28290 1259 aa17.24■□□□□ 0.35
MRPS28-201ENST00000276585 DPEP1P16444 411 aa17.23■□□□□ 0.35
MRPS28-201ENST00000276585 TOGARAM1Q9Y4F4 1720 aa17.23■□□□□ 0.35
MRPS28-201ENST00000276585 TNRC6CQ9HCJ0 1690 aaKnown RBP17.23■□□□□ 0.35
MRPS28-201ENST00000276585 PKD1L3Q7Z443 1732 aa17.22■□□□□ 0.35
MRPS28-201ENST00000276585 MPRIPQ6WCQ1 1025 aa17.22■□□□□ 0.35
MRPS28-201ENST00000276585 FOXN1O15353 648 aa17.21■□□□□ 0.35
MRPS28-201ENST00000276585 HDGFL2Q7Z4V5 671 aaPredicted RBP17.21■□□□□ 0.35
MRPS28-201ENST00000276585 IP6K1Q92551 441 aa17.21■□□□□ 0.35
MRPS28-201ENST00000276585 PRDM10Q9NQV6 1147 aa17.21■□□□□ 0.35
MRPS28-201ENST00000276585 KIAA1551Q9HCM1 1747 aa17.21■□□□□ 0.35
MRPS28-201ENST00000276585 MEGF6O75095 1541 aa17.21■□□□□ 0.34
MRPS28-201ENST00000276585 UBR3Q6ZT12 1888 aa17.2■□□□□ 0.34
MRPS28-201ENST00000276585 FAM208AQ9UK61 1670 aaKnown RBP17.2■□□□□ 0.34
MRPS28-201ENST00000276585 TERF2IPQ9NYB0 399 aa17.2■□□□□ 0.34
MRPS28-201ENST00000276585 CCER1Q8TC90 406 aaPredicted RBP17.19■□□□□ 0.34
MRPS28-201ENST00000276585 SMARCC1Q92922 1105 aaPredicted RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms