RNA–Protein interactions for RNA: ENST00000275223.7

VNN3-201, Transcript of vanin 3, humanhuman

TSL 1 (best) BASIC

Gene VNN3, Length 1,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-201ENST00000275223 SBNO2Q9Y2G9 1366 aa10.78□□□□□ -0.68
VNN3-201ENST00000275223 HMGB2P26583 209 aaKnown RBP10.78□□□□□ -0.68
VNN3-201ENST00000275223 POLD1P28340 1107 aa10.78□□□□□ -0.68
VNN3-201ENST00000275223 POLA2Q14181 598 aa10.78□□□□□ -0.68
VNN3-201ENST00000275223 AKT1S1Q96B36 256 aa10.77□□□□□ -0.69
VNN3-201ENST00000275223 ACSBG1Q96GR2 724 aa10.77□□□□□ -0.69
VNN3-201ENST00000275223 PUS7Q96PZ0 661 aaKnown RBP10.77□□□□□ -0.69
VNN3-201ENST00000275223 NFAT5O94916 1531 aa10.76□□□□□ -0.69
VNN3-201ENST00000275223 GPR162Q16538 588 aa10.76□□□□□ -0.69
VNN3-201ENST00000275223 HDGFL2Q7Z4V5 671 aaPredicted RBP10.76□□□□□ -0.69
VNN3-201ENST00000275223 HOMEZQ8IX15 550 aa10.76□□□□□ -0.69
VNN3-201ENST00000275223 ANKRD24Q8TF21 1146 aa10.76□□□□□ -0.69
VNN3-201ENST00000275223 LRRC4BQ9NT99 713 aa10.76□□□□□ -0.69
VNN3-201ENST00000275223 CASZ1Q86V15 1759 aa10.75□□□□□ -0.69
VNN3-201ENST00000275223 SENP3-EIF4A1A0A087X0R7 540 aa10.75□□□□□ -0.69
VNN3-201ENST00000275223 ZNF827Q17R98 1081 aa10.75□□□□□ -0.69
VNN3-201ENST00000275223 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.75□□□□□ -0.69
VNN3-201ENST00000275223 TERF2IPQ9NYB0 399 aa10.75□□□□□ -0.69
VNN3-201ENST00000275223 TRPM1Q7Z4N2 1603 aa10.75□□□□□ -0.69
VNN3-201ENST00000275223 GRIN3BO60391 1043 aa10.74□□□□□ -0.69
VNN3-201ENST00000275223 IP6K1Q92551 441 aa10.74□□□□□ -0.69
VNN3-201ENST00000275223 TSHZ2Q9NRE2 1034 aa10.74□□□□□ -0.69
VNN3-201ENST00000275223 TFCP2L1Q9NZI6 479 aa10.74□□□□□ -0.69
VNN3-201ENST00000275223 PIK3C2AO00443 1686 aa10.73□□□□□ -0.69
VNN3-201ENST00000275223 COL18A1P39060 1754 aa10.73□□□□□ -0.69
VNN3-201ENST00000275223 GIGYF1O75420 1035 aaPredicted RBP10.73□□□□□ -0.69
VNN3-201ENST00000275223 NME9Q86XW9 330 aa10.73□□□□□ -0.69
VNN3-201ENST00000275223 PNPLA7Q6ZV29 1317 aa10.72□□□□□ -0.69
VNN3-201ENST00000275223 EDC4Q6P2E9 1401 aaKnown RBP10.72□□□□□ -0.69
VNN3-201ENST00000275223 CGNL1Q0VF96 1302 aa10.71□□□□□ -0.69
VNN3-201ENST00000275223 DDX54Q8TDD1 881 aaKnown RBP10.71□□□□□ -0.69
VNN3-201ENST00000275223 TMC1Q8TDI8 760 aa10.71□□□□□ -0.69
VNN3-201ENST00000275223 SLC12A5Q9H2X9 1139 aa10.71□□□□□ -0.69
VNN3-201ENST00000275223 QRICH2Q9H0J4 1663 aa10.7□□□□□ -0.7
VNN3-201ENST00000275223 ANKRD36BQ8N2N9 1353 aa10.7□□□□□ -0.7
VNN3-201ENST00000275223 PRIM1P49642 420 aaKnown RBP10.7□□□□□ -0.7
VNN3-201ENST00000275223 PLCD3Q8N3E9 789 aa10.7□□□□□ -0.7
VNN3-201ENST00000275223 CARD11Q9BXL7 1154 aa10.7□□□□□ -0.7
VNN3-201ENST00000275223 MYOM1P52179 1685 aa10.69□□□□□ -0.7
VNN3-201ENST00000275223 CD163L1Q9NR16 1453 aa10.69□□□□□ -0.7
VNN3-201ENST00000275223 FLAD1Q8NFF5 587 aa10.69□□□□□ -0.7
VNN3-201ENST00000275223 ZCRB1Q8TBF4 217 aaKnown RBP10.69□□□□□ -0.7
VNN3-201ENST00000275223 SYTL4Q96C24 671 aaPredicted RBP10.68□□□□□ -0.7
VNN3-201ENST00000275223 COG3Q96JB2 828 aa10.68□□□□□ -0.7
VNN3-201ENST00000275223 SIN3AQ96ST3 1273 aa10.68□□□□□ -0.7
VNN3-201ENST00000275223 CCNL1Q9UK58 526 aaPredicted RBP10.68□□□□□ -0.7
VNN3-201ENST00000275223 ZBTB12Q9Y330 459 aaPredicted RBP10.68□□□□□ -0.7
VNN3-201ENST00000275223 PAPPAQ13219 1627 aa10.68□□□□□ -0.7
VNN3-201ENST00000275223 HOXC9P31274 260 aa10.67□□□□□ -0.7
VNN3-201ENST00000275223 MKRN4PQ13434 485 aaPredicted RBP10.67□□□□□ -0.7
VNN3-201ENST00000275223 NEUROD1Q13562 356 aa10.67□□□□□ -0.7
VNN3-201ENST00000275223 TMEM132AQ24JP5 1023 aa10.67□□□□□ -0.7
VNN3-201ENST00000275223 IFFO2Q5TF58 517 aa10.67□□□□□ -0.7
VNN3-201ENST00000275223 CD2APQ9Y5K6 639 aa10.67□□□□□ -0.7
VNN3-201ENST00000275223 NHSQ6T4R5 1651 aa10.66□□□□□ -0.7
VNN3-201ENST00000275223 A0A1W2PP64 1363 aa10.66□□□□□ -0.7
VNN3-201ENST00000275223 USP47Q96K76 1375 aa10.66□□□□□ -0.7
VNN3-201ENST00000275223 MAP3K19Q56UN5 1328 aa10.66□□□□□ -0.7
VNN3-201ENST00000275223 SBF2Q86WG5 1849 aa10.66□□□□□ -0.7
VNN3-201ENST00000275223 AMPHP49418 695 aa10.66□□□□□ -0.7
VNN3-201ENST00000275223 PELP1Q8IZL8 1130 aaKnown RBP10.66□□□□□ -0.7
VNN3-201ENST00000275223 NLGN2Q8NFZ4 835 aa10.66□□□□□ -0.7
VNN3-201ENST00000275223 LTV1Q96GA3 475 aaPredicted RBP10.65□□□□□ -0.7
VNN3-201ENST00000275223 RTL1A6NKG5 1358 aa10.65□□□□□ -0.71
VNN3-201ENST00000275223 NSD2O96028 1365 aa10.65□□□□□ -0.71
VNN3-201ENST00000275223 YBX3P16989 372 aaKnown RBP eCLIP10.64□□□□□ -0.71
VNN3-201ENST00000275223 COL23A1Q86Y22 540 aaPredicted RBP10.64□□□□□ -0.71
VNN3-201ENST00000275223 RAPGEF4Q8WZA2 1011 aa10.64□□□□□ -0.71
VNN3-201ENST00000275223 ZBTB47Q9UFB7 747 aaPredicted RBP10.64□□□□□ -0.71
VNN3-201ENST00000275223 RGL2O15211 777 aa10.63□□□□□ -0.71
VNN3-201ENST00000275223 KCNQ4P56696 695 aa10.63□□□□□ -0.71
VNN3-201ENST00000275223 NBPF6Q5VWK0 638 aa10.62□□□□□ -0.71
VNN3-201ENST00000275223 SMARCC1Q92922 1105 aaPredicted RBP10.62□□□□□ -0.71
VNN3-201ENST00000275223 NBPF4Q96M43 638 aa10.62□□□□□ -0.71
VNN3-201ENST00000275223 TESK2Q96S53 571 aa10.62□□□□□ -0.71
VNN3-201ENST00000275223 GPBP1L1Q9HC44 474 aaPredicted RBP10.62□□□□□ -0.71
VNN3-201ENST00000275223 KIF24Q5T7B8 1368 aa10.62□□□□□ -0.71
VNN3-201ENST00000275223 PCDH11XQ9BZA7 1347 aa10.61□□□□□ -0.71
VNN3-201ENST00000275223 PCDH11YQ9BZA8 1340 aa10.61□□□□□ -0.71
VNN3-201ENST00000275223 WNK3Q9BYP7 1800 aa10.61□□□□□ -0.71
VNN3-201ENST00000275223 SMG6Q86US8 1419 aaKnown RBP10.61□□□□□ -0.71
VNN3-201ENST00000275223 USP54Q70EL1 1684 aa10.61□□□□□ -0.71
VNN3-201ENST00000275223 TATP17735 454 aaPredicted RBP10.61□□□□□ -0.71
VNN3-201ENST00000275223 AKAP12Q02952 1782 aa10.61□□□□□ -0.71
VNN3-201ENST00000275223 NSD3Q9BZ95 1437 aa10.59□□□□□ -0.71
VNN3-201ENST00000275223 ATP10DQ9P241 1426 aa10.59□□□□□ -0.71
VNN3-201ENST00000275223 MEGF6O75095 1541 aa10.59□□□□□ -0.71
VNN3-201ENST00000275223 ST20-MTHFSA0A0A6YYL1 179 aa10.59□□□□□ -0.71
VNN3-201ENST00000275223 FYB1O15117 783 aa10.59□□□□□ -0.71
VNN3-201ENST00000275223 HSPA6P17066 643 aa10.59□□□□□ -0.71
VNN3-201ENST00000275223 CIZ1Q9ULV3 898 aaPredicted RBP10.59□□□□□ -0.71
VNN3-201ENST00000275223 INSRP06213 1382 aa10.59□□□□□ -0.71
VNN3-201ENST00000275223 PALLDQ8WX93 1383 aa10.59□□□□□ -0.71
VNN3-201ENST00000275223 ADCY9O60503 1353 aa10.58□□□□□ -0.72
VNN3-201ENST00000275223 SSFA2P28290 1259 aa10.58□□□□□ -0.72
VNN3-201ENST00000275223 RRS1Q15050 365 aaKnown RBP10.58□□□□□ -0.72
VNN3-201ENST00000275223 NKX1-1Q15270 411 aaPredicted RBP10.58□□□□□ -0.72
VNN3-201ENST00000275223 MSL1Q68DK7 614 aa10.58□□□□□ -0.72
VNN3-201ENST00000275223 AK7Q96M32 723 aa10.58□□□□□ -0.72
VNN3-201ENST00000275223 MON2Q7Z3U7 1717 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms