RNA–Protein interactions for RNA: ENST00000274026.9

CCNA2-201, Transcript of cyclin A2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNA2, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA2-201ENST00000274026 PHACTR3Q96KR7 559 aa20.22■□□□□ 0.83
CCNA2-201ENST00000274026 ERC2O15083 957 aa20.21■□□□□ 0.83
CCNA2-201ENST00000274026 DMTNQ08495 405 aa20.21■□□□□ 0.83
CCNA2-201ENST00000274026 VGFO15240 615 aaPredicted RBP20.21■□□□□ 0.83
CCNA2-201ENST00000274026 TMX3Q96JJ7 454 aa20.21■□□□□ 0.83
CCNA2-201ENST00000274026 HMGN5P82970 282 aaKnown RBP20.2■□□□□ 0.82
CCNA2-201ENST00000274026 NUTM2DQ5VT03 806 aaPredicted RBP20.2■□□□□ 0.82
CCNA2-201ENST00000274026 C8orf58Q8NAV2 365 aa20.19■□□□□ 0.82
CCNA2-201ENST00000274026 CD163L1Q9NR16 1453 aa20.19■□□□□ 0.82
CCNA2-201ENST00000274026 PHF14O94880 888 aa20.19■□□□□ 0.82
CCNA2-201ENST00000274026 NEK4P51957 841 aa20.19■□□□□ 0.82
CCNA2-201ENST00000274026 RPAP2Q8IXW5 612 aaPredicted RBP20.19■□□□□ 0.82
CCNA2-201ENST00000274026 PIBF1Q8WXW3 757 aa20.19■□□□□ 0.82
CCNA2-201ENST00000274026 MCM2P49736 904 aa20.18■□□□□ 0.82
CCNA2-201ENST00000274026 ATP10DQ9P241 1426 aa20.18■□□□□ 0.82
CCNA2-201ENST00000274026 ZSCAN20P17040 1043 aaPredicted RBP20.18■□□□□ 0.82
CCNA2-201ENST00000274026 GTF2F1P35269 517 aaKnown RBP eCLIP20.18■□□□□ 0.82
CCNA2-201ENST00000274026 ZHX1Q9UKY1 873 aaPredicted RBP20.18■□□□□ 0.82
CCNA2-201ENST00000274026 UVSSAQ2YD98 709 aa20.17■□□□□ 0.82
CCNA2-201ENST00000274026 KIDINS220Q9ULH0 1771 aa20.17■□□□□ 0.82
CCNA2-201ENST00000274026 SMARCA5O60264 1052 aaPredicted RBP20.17■□□□□ 0.82
CCNA2-201ENST00000274026 HMOX1P09601 288 aa20.17■□□□□ 0.82
CCNA2-201ENST00000274026 NOLC1Q14978 699 aaKnown RBP eCLIP20.17■□□□□ 0.82
CCNA2-201ENST00000274026 FAM184AQ8NB25 1140 aa20.17■□□□□ 0.82
CCNA2-201ENST00000274026 CUL4AQ13619 759 aa20.17■□□□□ 0.82
CCNA2-201ENST00000274026 HDGFL2Q7Z4V5 671 aaPredicted RBP20.17■□□□□ 0.82
CCNA2-201ENST00000274026 ZNF710Q8N1W2 664 aa20.17■□□□□ 0.82
CCNA2-201ENST00000274026 CEP85Q6P2H3 762 aa20.16■□□□□ 0.82
CCNA2-201ENST00000274026 ZBTB7CA1YPR0 619 aa20.16■□□□□ 0.82
CCNA2-201ENST00000274026 JARID2Q92833 1246 aaPredicted RBP20.15■□□□□ 0.82
CCNA2-201ENST00000274026 STK26Q9P289 416 aa20.15■□□□□ 0.82
CCNA2-201ENST00000274026 APBB1O00213 710 aa20.15■□□□□ 0.82
CCNA2-201ENST00000274026 POLKQ9UBT6 870 aa20.15■□□□□ 0.82
CCNA2-201ENST00000274026 INTS4Q96HW7 963 aaKnown RBP20.14■□□□□ 0.82
CCNA2-201ENST00000274026 TSC1Q92574 1164 aa20.14■□□□□ 0.81
CCNA2-201ENST00000274026 ZNF830Q96NB3 372 aaPredicted RBP20.14■□□□□ 0.81
CCNA2-201ENST00000274026 KIF20BQ96Q89 1820 aa20.14■□□□□ 0.81
CCNA2-201ENST00000274026 NEXMIFQ5QGS0 1516 aa20.13■□□□□ 0.81
CCNA2-201ENST00000274026 ASXL2Q76L83 1435 aa20.13■□□□□ 0.81
CCNA2-201ENST00000274026 MINK1Q8N4C8 1332 aaPredicted RBP20.13■□□□□ 0.81
CCNA2-201ENST00000274026 MPNDQ8N594 471 aa20.12■□□□□ 0.81
CCNA2-201ENST00000274026 LMOD3Q0VAK6 560 aa20.12■□□□□ 0.81
CCNA2-201ENST00000274026 KIF3AQ9Y496 699 aa20.12■□□□□ 0.81
CCNA2-201ENST00000274026 GADD45BO75293 160 aaPredicted RBP20.12■□□□□ 0.81
CCNA2-201ENST00000274026 USP25Q9UHP3 1055 aa20.12■□□□□ 0.81
CCNA2-201ENST00000274026 ABCC3O15438 1527 aa20.11■□□□□ 0.81
CCNA2-201ENST00000274026 FBLN1P23142 703 aa20.11■□□□□ 0.81
CCNA2-201ENST00000274026 GGT6Q6P531 493 aa20.11■□□□□ 0.81
CCNA2-201ENST00000274026 GTPBP4Q9BZE4 634 aaKnown RBP20.11■□□□□ 0.81
CCNA2-201ENST00000274026 SPTLC3Q9NUV7 552 aa20.11■□□□□ 0.81
CCNA2-201ENST00000274026 RTL1A6NKG5 1358 aa20.11■□□□□ 0.81
CCNA2-201ENST00000274026 FKBP5Q13451 457 aaPredicted RBP20.1■□□□□ 0.81
CCNA2-201ENST00000274026 OSBPL3Q9H4L5 887 aa20.1■□□□□ 0.81
CCNA2-201ENST00000274026 TTC12Q9H892 705 aaPredicted RBP20.1■□□□□ 0.81
CCNA2-201ENST00000274026 CLTCQ00610 1675 aaKnown RBP20.1■□□□□ 0.81
CCNA2-201ENST00000274026 ADCY5O95622 1261 aa20.1■□□□□ 0.81
CCNA2-201ENST00000274026 CBX1P83916 185 aa20.1■□□□□ 0.81
CCNA2-201ENST00000274026 USP48Q86UV5 1035 aa20.1■□□□□ 0.81
CCNA2-201ENST00000274026 ARHGEF40Q8TER5 1519 aa20.09■□□□□ 0.81
CCNA2-201ENST00000274026 PIK3C2BO00750 1634 aa20.09■□□□□ 0.81
CCNA2-201ENST00000274026 GDPD2Q9HCC8 539 aa20.09■□□□□ 0.81
CCNA2-201ENST00000274026 FRMPD1Q5SYB0 1578 aa20.09■□□□□ 0.81
CCNA2-201ENST00000274026 MCCP23508 829 aa20.09■□□□□ 0.81
CCNA2-201ENST00000274026 PDE1AP54750 535 aa20.08■□□□□ 0.81
CCNA2-201ENST00000274026 PPP4R3BQ5MIZ7 849 aa20.08■□□□□ 0.81
CCNA2-201ENST00000274026 RIMS2Q9UQ26 1411 aa20.08■□□□□ 0.81
CCNA2-201ENST00000274026 PTPRMP28827 1452 aa20.08■□□□□ 0.81
CCNA2-201ENST00000274026 FOXD4L6Q3SYB3 417 aaPredicted RBP20.08■□□□□ 0.8
CCNA2-201ENST00000274026 FOXD4L3Q6VB84 417 aaPredicted RBP20.08■□□□□ 0.8
CCNA2-201ENST00000274026 RGS12O14924 1447 aa20.08■□□□□ 0.8
CCNA2-201ENST00000274026 ANAPC15P60006 121 aa20.07■□□□□ 0.8
CCNA2-201ENST00000274026 C17orf53Q8N3J3 647 aaPredicted RBP20.07■□□□□ 0.8
CCNA2-201ENST00000274026 PRAM1Q96QH2 718 aa20.07■□□□□ 0.8
CCNA2-201ENST00000274026 CABP1Q9NZU7 370 aa20.07■□□□□ 0.8
CCNA2-201ENST00000274026 DLG5Q8TDM6 1919 aa20.07■□□□□ 0.8
CCNA2-201ENST00000274026 CCDC183Q5T5S1 534 aa20.07■□□□□ 0.8
CCNA2-201ENST00000274026 WDR33Q9C0J8 1336 aaKnown RBP20.07■□□□□ 0.8
CCNA2-201ENST00000274026 MSH6P52701 1360 aa20.07■□□□□ 0.8
CCNA2-201ENST00000274026 HECW2Q9P2P5 1572 aa20.07■□□□□ 0.8
CCNA2-201ENST00000274026 YTHDC2Q9H6S0 1430 aaKnown RBP20.07■□□□□ 0.8
CCNA2-201ENST00000274026 IL13P35225 146 aa20.06■□□□□ 0.8
CCNA2-201ENST00000274026 NOL8Q76FK4 1167 aaKnown RBP20.06■□□□□ 0.8
CCNA2-201ENST00000274026 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.06■□□□□ 0.8
CCNA2-201ENST00000274026 ESYT1Q9BSJ8 1104 aa20.06■□□□□ 0.8
CCNA2-201ENST00000274026 MAP2P11137 1827 aaKnown RBP20.06■□□□□ 0.8
CCNA2-201ENST00000274026 ATP2B3Q16720 1220 aa20.06■□□□□ 0.8
CCNA2-201ENST00000274026 MEIS3Q99687 375 aa20.06■□□□□ 0.8
CCNA2-201ENST00000274026 PALD1Q9ULE6 856 aa20.06■□□□□ 0.8
CCNA2-201ENST00000274026 CPSF1Q10570 1443 aaKnown RBP20.06■□□□□ 0.8
CCNA2-201ENST00000274026 HMMRO75330 724 aa20.06■□□□□ 0.8
CCNA2-201ENST00000274026 LETM1O95202 739 aaPredicted RBP20.06■□□□□ 0.8
CCNA2-201ENST00000274026 BCL2L12Q9HB09 334 aa20.06■□□□□ 0.8
CCNA2-201ENST00000274026 FAM83GA6ND36 823 aa20.05■□□□□ 0.8
CCNA2-201ENST00000274026 HAP1P54257 671 aaPredicted RBP20.05■□□□□ 0.8
CCNA2-201ENST00000274026 TMEM87AQ8NBN3 555 aa20.05■□□□□ 0.8
CCNA2-201ENST00000274026 CDK19Q9BWU1 502 aa20.05■□□□□ 0.8
CCNA2-201ENST00000274026 FAM177BA6PVY3 158 aa20.04■□□□□ 0.8
CCNA2-201ENST00000274026 KIF20AO95235 890 aa20.04■□□□□ 0.8
CCNA2-201ENST00000274026 HCLS1P14317 486 aaPredicted RBP20.04■□□□□ 0.8
CCNA2-201ENST00000274026 MX1P20591 662 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms