RNA–Protein interactions for RNA: ENST00000273590.3

TCTA-201, Transcript of T cell leukemia translocation altered, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TCTA, Length 2,146 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCTA-201ENST00000273590 GAS2L2Q8NHY3 880 aa24.17■■□□□ 1.46
TCTA-201ENST00000273590 RTF1Q92541 710 aaKnown RBP24.17■■□□□ 1.46
TCTA-201ENST00000273590 XPCQ01831 940 aaPredicted RBP24.16■■□□□ 1.46
TCTA-201ENST00000273590 SMC5Q8IY18 1101 aa24.16■■□□□ 1.46
TCTA-201ENST00000273590 C1orf115Q9H7X2 142 aa24.16■■□□□ 1.46
TCTA-201ENST00000273590 USHBP1Q8N6Y0 703 aa24.16■■□□□ 1.46
TCTA-201ENST00000273590 API5Q9BZZ5 524 aaKnown RBP24.15■■□□□ 1.46
TCTA-201ENST00000273590 VIRMAQ69YN4 1812 aaKnown RBP24.15■■□□□ 1.46
TCTA-201ENST00000273590 RTL1A6NKG5 1358 aa24.14■■□□□ 1.46
TCTA-201ENST00000273590 PROSER2Q86WR7 435 aaPredicted RBP24.14■■□□□ 1.45
TCTA-201ENST00000273590 LTN1O94822 1766 aa24.14■■□□□ 1.45
TCTA-201ENST00000273590 IP6K1Q92551 441 aa24.13■■□□□ 1.45
TCTA-201ENST00000273590 USP19O94966 1318 aa24.13■■□□□ 1.45
TCTA-201ENST00000273590 MYT1Q01538 1121 aa24.13■■□□□ 1.45
TCTA-201ENST00000273590 TSPYL4Q9UJ04 414 aa24.13■■□□□ 1.45
TCTA-201ENST00000273590 ZBTB7CA1YPR0 619 aa24.12■■□□□ 1.45
TCTA-201ENST00000273590 DDRGK1Q96HY6 314 aa24.12■■□□□ 1.45
TCTA-201ENST00000273590 RGS12O14924 1447 aa24.11■■□□□ 1.45
TCTA-201ENST00000273590 PLEKHG5O94827 1062 aa24.11■■□□□ 1.45
TCTA-201ENST00000273590 MSH6P52701 1360 aa24.1■■□□□ 1.45
TCTA-201ENST00000273590 GNAT3A8MTJ3 354 aa24.1■■□□□ 1.45
TCTA-201ENST00000273590 HTATSF1O43719 755 aaKnown RBP24.09■■□□□ 1.45
TCTA-201ENST00000273590 SIRT2Q8IXJ6 389 aa24.09■■□□□ 1.45
TCTA-201ENST00000273590 NBPF6Q5VWK0 638 aa24.08■■□□□ 1.45
TCTA-201ENST00000273590 NBPF4Q96M43 638 aa24.08■■□□□ 1.45
TCTA-201ENST00000273590 IL17REQ8NFR9 667 aa24.08■■□□□ 1.45
TCTA-201ENST00000273590 LRRC37A3O60309 1634 aa24.08■■□□□ 1.44
TCTA-201ENST00000273590 SLC4A3P48751 1232 aa24.07■■□□□ 1.44
TCTA-201ENST00000273590 HAP1P54257 671 aaPredicted RBP24.07■■□□□ 1.44
TCTA-201ENST00000273590 NUCB1Q02818 461 aa24.07■■□□□ 1.44
TCTA-201ENST00000273590 KCNH5Q8NCM2 988 aa24.07■■□□□ 1.44
TCTA-201ENST00000273590 CHMP4BQ9H444 224 aaKnown RBP24.07■■□□□ 1.44
TCTA-201ENST00000273590 MAP3K5Q99683 1374 aa24.06■■□□□ 1.44
TCTA-201ENST00000273590 INTS3Q68E01 1043 aaKnown RBP24.06■■□□□ 1.44
TCTA-201ENST00000273590 C1orf167Q5SNV9 1468 aa24.05■■□□□ 1.44
TCTA-201ENST00000273590 SLC4A2P04920 1241 aa24.05■■□□□ 1.44
TCTA-201ENST00000273590 GCP02774 474 aa24.04■■□□□ 1.44
TCTA-201ENST00000273590 LMOD2Q6P5Q4 547 aa24.04■■□□□ 1.44
TCTA-201ENST00000273590 LNPKQ9C0E8 428 aa24.04■■□□□ 1.44
TCTA-201ENST00000273590 NBR1Q14596 966 aa24.04■■□□□ 1.44
TCTA-201ENST00000273590 G2E3Q7L622 706 aa24.04■■□□□ 1.44
TCTA-201ENST00000273590 KRT28Q7Z3Y7 464 aa24.04■■□□□ 1.44
TCTA-201ENST00000273590 LRRC59Q96AG4 307 aaKnown RBP24.04■■□□□ 1.44
TCTA-201ENST00000273590 C19orf44Q9H6X5 657 aa24.03■■□□□ 1.44
TCTA-201ENST00000273590 CHD1LQ86WJ1 897 aa24.02■■□□□ 1.44
TCTA-201ENST00000273590 SLIT3O75094 1523 aa24.02■■□□□ 1.44
TCTA-201ENST00000273590 PTPRCP08575 1304 aa24.02■■□□□ 1.44
TCTA-201ENST00000273590 ARHGEF25Q86VW2 580 aa24.02■■□□□ 1.44
TCTA-201ENST00000273590 TRPM3Q9HCF6 1732 aaPredicted RBP24.01■■□□□ 1.43
TCTA-201ENST00000273590 RGPD2P0DJD1 1756 aa24■■□□□ 1.43
TCTA-201ENST00000273590 PHRF1Q9P1Y6 1649 aaKnown RBP24■■□□□ 1.43
TCTA-201ENST00000273590 ANKRD45Q5TZF3 282 aa23.99■■□□□ 1.43
TCTA-201ENST00000273590 GCC1Q96CN9 775 aa23.99■■□□□ 1.43
TCTA-201ENST00000273590 TAF7Q15545 349 aaPredicted RBP23.98■■□□□ 1.43
TCTA-201ENST00000273590 TMEM94Q12767 1356 aa23.98■■□□□ 1.43
TCTA-201ENST00000273590 STRCP1A6NGW2 1772 aa23.97■■□□□ 1.43
TCTA-201ENST00000273590 F6X3S4 739 aa23.96■■□□□ 1.43
TCTA-201ENST00000273590 NECTIN2Q92692 538 aa23.96■■□□□ 1.43
TCTA-201ENST00000273590 DDX17Q92841 729 aaKnown RBP23.96■■□□□ 1.43
TCTA-201ENST00000273590 LGR6Q9HBX8 967 aa23.96■■□□□ 1.43
TCTA-201ENST00000273590 AXIN2Q9Y2T1 843 aa23.96■■□□□ 1.43
TCTA-201ENST00000273590 MEIS3Q99687 375 aa23.95■■□□□ 1.42
TCTA-201ENST00000273590 KIF1AQ12756 1690 aa23.95■■□□□ 1.42
TCTA-201ENST00000273590 MST1RQ04912 1400 aa23.95■■□□□ 1.42
TCTA-201ENST00000273590 ATP10DQ9P241 1426 aa23.94■■□□□ 1.42
TCTA-201ENST00000273590 CEMIPQ8WUJ3 1361 aa23.94■■□□□ 1.42
TCTA-201ENST00000273590 KDM4FA0A1W2PPD8 638 aa23.94■■□□□ 1.42
TCTA-201ENST00000273590 HSPA2P54652 639 aa23.94■■□□□ 1.42
TCTA-201ENST00000273590 ANKRD24Q8TF21 1146 aa23.94■■□□□ 1.42
TCTA-201ENST00000273590 ATF3P18847 181 aa23.93■■□□□ 1.42
TCTA-201ENST00000273590 TBC1D32Q96NH3 1257 aa23.93■■□□□ 1.42
TCTA-201ENST00000273590 BABAM1Q9NWV8 329 aa23.93■■□□□ 1.42
TCTA-201ENST00000273590 SLC4A10Q6U841 1118 aa23.92■■□□□ 1.42
TCTA-201ENST00000273590 ANKRD44Q8N8A2 993 aa23.92■■□□□ 1.42
TCTA-201ENST00000273590 STK31Q9BXU1 1019 aa23.92■■□□□ 1.42
TCTA-201ENST00000273590 CCDC30Q5VVM6 783 aa23.92■■□□□ 1.42
TCTA-201ENST00000273590 DAXXQ9UER7 740 aaPredicted RBP23.92■■□□□ 1.42
TCTA-201ENST00000273590 CEP85Q6P2H3 762 aa23.91■■□□□ 1.42
TCTA-201ENST00000273590 NCAPD2Q15021 1401 aa23.91■■□□□ 1.42
TCTA-201ENST00000273590 FAM208AQ9UK61 1670 aaKnown RBP23.9■■□□□ 1.42
TCTA-201ENST00000273590 ZNF530Q6P9A1 599 aaPredicted RBP23.9■■□□□ 1.42
TCTA-201ENST00000273590 DCTPP1Q9H773 170 aa23.9■■□□□ 1.42
TCTA-201ENST00000273590 UPF2Q9HAU5 1272 aaKnown RBP23.9■■□□□ 1.42
TCTA-201ENST00000273590 MED1Q15648 1581 aaPredicted RBP23.89■■□□□ 1.42
TCTA-201ENST00000273590 ZC3H6P61129 1189 aaKnown RBP23.89■■□□□ 1.42
TCTA-201ENST00000273590 FLIIQ13045 1269 aa23.89■■□□□ 1.42
TCTA-201ENST00000273590 ALS2Q96Q42 1657 aa23.89■■□□□ 1.41
TCTA-201ENST00000273590 PLEKHO1Q53GL0 409 aaPredicted RBP23.89■■□□□ 1.41
TCTA-201ENST00000273590 PXDNQ92626 1479 aa23.88■■□□□ 1.41
TCTA-201ENST00000273590 MFAP1P55081 439 aaKnown RBP23.88■■□□□ 1.41
TCTA-201ENST00000273590 KCNQ3O43525 872 aa23.87■■□□□ 1.41
TCTA-201ENST00000273590 AKAP4Q5JQC9 854 aa23.87■■□□□ 1.41
TCTA-201ENST00000273590 MPRIPQ6WCQ1 1025 aa23.87■■□□□ 1.41
TCTA-201ENST00000273590 RPAP2Q8IXW5 612 aaPredicted RBP23.87■■□□□ 1.41
TCTA-201ENST00000273590 CCT4P50991 539 aaKnown RBP23.87■■□□□ 1.41
TCTA-201ENST00000273590 LMO7Q8WWI1 1683 aa23.86■■□□□ 1.41
TCTA-201ENST00000273590 SOS1Q07889 1333 aaPredicted RBP23.86■■□□□ 1.41
TCTA-201ENST00000273590 FKBP5Q13451 457 aaPredicted RBP23.86■■□□□ 1.41
TCTA-201ENST00000273590 EIF4A1P60842 406 aaKnown RBP23.85■■□□□ 1.41
TCTA-201ENST00000273590 BMP2KLQ5H9B9 411 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms