RNA–Protein interactions for RNA: ENST00000273027.6

CPNE9-201, Transcript of copine family member 9, humanhuman

TSL 3

Gene CPNE9, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-201ENST00000273027 SAFB2Q14151 953 aaKnown RBP eCLIP12.8□□□□□ -0.36
CPNE9-201ENST00000273027 PPP1R1BQ9UD71 204 aaPredicted RBP12.8□□□□□ -0.36
CPNE9-201ENST00000273027 SPATA31A5Q5VU36 1347 aa12.8□□□□□ -0.36
CPNE9-201ENST00000273027 SPATA31A7Q8IWB4 1347 aa12.8□□□□□ -0.36
CPNE9-201ENST00000273027 FYB1O15117 783 aa12.79□□□□□ -0.36
CPNE9-201ENST00000273027 RGS3P49796 1198 aa12.79□□□□□ -0.36
CPNE9-201ENST00000273027 HDAC1Q13547 482 aaPredicted RBP12.79□□□□□ -0.36
CPNE9-201ENST00000273027 FRAT1Q92837 279 aaPredicted RBP12.79□□□□□ -0.36
CPNE9-201ENST00000273027 CABP2Q9NPB3 220 aa12.79□□□□□ -0.36
CPNE9-201ENST00000273027 AATKQ6ZMQ8 1374 aa12.79□□□□□ -0.36
CPNE9-201ENST00000273027 EDC4Q6P2E9 1401 aaKnown RBP12.79□□□□□ -0.36
CPNE9-201ENST00000273027 NBPF14Q5TI25 921 aa12.78□□□□□ -0.36
CPNE9-201ENST00000273027 FAM196AQ6ZSG2 479 aa12.78□□□□□ -0.36
CPNE9-201ENST00000273027 FTSJ3Q8IY81 847 aaKnown RBP12.78□□□□□ -0.36
CPNE9-201ENST00000273027 PANK1Q8TE04 598 aa12.78□□□□□ -0.36
CPNE9-201ENST00000273027 CFAP44Q96MT7 982 aa12.78□□□□□ -0.36
CPNE9-201ENST00000273027 RGPD1P0DJD0 1748 aa12.78□□□□□ -0.36
CPNE9-201ENST00000273027 TNNT2P45379 298 aaPredicted RBP12.77□□□□□ -0.37
CPNE9-201ENST00000273027 LMOD3Q0VAK6 560 aa12.77□□□□□ -0.37
CPNE9-201ENST00000273027 NEUROD2Q15784 382 aa12.77□□□□□ -0.37
CPNE9-201ENST00000273027 ARHGAP45Q92619 1136 aa12.77□□□□□ -0.37
CPNE9-201ENST00000273027 PRAM1Q96QH2 718 aa12.77□□□□□ -0.37
CPNE9-201ENST00000273027 DISP2A7MBM2 1401 aa12.77□□□□□ -0.37
CPNE9-201ENST00000273027 ATF7IPQ6VMQ6 1270 aa12.76□□□□□ -0.37
CPNE9-201ENST00000273027 CDK19Q9BWU1 502 aa12.76□□□□□ -0.37
CPNE9-201ENST00000273027 SPON1Q9HCB6 807 aa12.76□□□□□ -0.37
CPNE9-201ENST00000273027 MAP2P11137 1827 aaKnown RBP12.75□□□□□ -0.37
CPNE9-201ENST00000273027 CPSF1Q10570 1443 aaKnown RBP12.75□□□□□ -0.37
CPNE9-201ENST00000273027 NFKBIBQ15653 356 aa12.75□□□□□ -0.37
CPNE9-201ENST00000273027 MON2Q7Z3U7 1717 aa12.75□□□□□ -0.37
CPNE9-201ENST00000273027 TRPM3Q9HCF6 1732 aaPredicted RBP12.75□□□□□ -0.37
CPNE9-201ENST00000273027 PRDM11Q9NQV5 511 aa12.75□□□□□ -0.37
CPNE9-201ENST00000273027 AKAP12Q02952 1782 aa12.74□□□□□ -0.37
CPNE9-201ENST00000273027 KIF24Q5T7B8 1368 aa12.74□□□□□ -0.37
CPNE9-201ENST00000273027 U2SURPO15042 1029 aaKnown RBP12.74□□□□□ -0.37
CPNE9-201ENST00000273027 ZNF692Q9BU19 519 aaPredicted RBP12.74□□□□□ -0.37
CPNE9-201ENST00000273027 STRN4Q9NRL3 753 aa12.74□□□□□ -0.37
CPNE9-201ENST00000273027 SMC4Q9NTJ3 1288 aa12.74□□□□□ -0.37
CPNE9-201ENST00000273027 TRIM35Q9UPQ4 493 aa12.74□□□□□ -0.37
CPNE9-201ENST00000273027 PDZRN3Q9UPQ7 1066 aa12.74□□□□□ -0.37
CPNE9-201ENST00000273027 RRP7AQ9Y3A4 280 aaKnown RBP12.74□□□□□ -0.37
CPNE9-201ENST00000273027 ITSN1Q15811 1721 aa12.74□□□□□ -0.37
CPNE9-201ENST00000273027 ALS2Q96Q42 1657 aa12.73□□□□□ -0.37
CPNE9-201ENST00000273027 KCNQ2O43526 872 aa12.73□□□□□ -0.37
CPNE9-201ENST00000273027 RIPK4P57078 832 aa12.73□□□□□ -0.37
CPNE9-201ENST00000273027 GSE1Q14687 1217 aa12.73□□□□□ -0.37
CPNE9-201ENST00000273027 SMC5Q8IY18 1101 aa12.73□□□□□ -0.37
CPNE9-201ENST00000273027 GGNBP2Q9H3C7 697 aa12.73□□□□□ -0.37
CPNE9-201ENST00000273027 LAS1LQ9Y4W2 734 aaKnown RBP12.73□□□□□ -0.37
CPNE9-201ENST00000273027 ANKARQ7Z5J8 1434 aa12.72□□□□□ -0.37
CPNE9-201ENST00000273027 SPATA31A1Q5TZJ5 1347 aa12.72□□□□□ -0.37
CPNE9-201ENST00000273027 MINK1Q8N4C8 1332 aaPredicted RBP12.72□□□□□ -0.37
CPNE9-201ENST00000273027 NRAPQ86VF7 1730 aa12.72□□□□□ -0.37
CPNE9-201ENST00000273027 CRYBG1Q9Y4K1 1723 aa12.72□□□□□ -0.37
CPNE9-201ENST00000273027 GNAI1P63096 354 aa12.72□□□□□ -0.37
CPNE9-201ENST00000273027 EXOSC9Q06265 439 aaKnown RBP12.72□□□□□ -0.37
CPNE9-201ENST00000273027 CHRNA2Q15822 529 aa12.72□□□□□ -0.37
CPNE9-201ENST00000273027 TBC1D32Q96NH3 1257 aa12.72□□□□□ -0.37
CPNE9-201ENST00000273027 PCDHB15Q9Y5E8 787 aa12.72□□□□□ -0.37
CPNE9-201ENST00000273027 COL14A1Q05707 1796 aaKnown RBP12.71□□□□□ -0.37
CPNE9-201ENST00000273027 TNS1Q9HBL0 1735 aaKnown RBP12.71□□□□□ -0.37
CPNE9-201ENST00000273027 USP19O94966 1318 aa12.71□□□□□ -0.37
CPNE9-201ENST00000273027 EVA1CP58658 441 aa12.71□□□□□ -0.37
CPNE9-201ENST00000273027 NGDNQ8NEJ9 315 aaKnown RBP12.71□□□□□ -0.37
CPNE9-201ENST00000273027 RLBP1P12271 317 aa12.7□□□□□ -0.38
CPNE9-201ENST00000273027 TRIM27P14373 513 aa12.7□□□□□ -0.38
CPNE9-201ENST00000273027 NFE2L2Q16236 605 aa12.7□□□□□ -0.38
CPNE9-201ENST00000273027 IFT57Q9NWB7 429 aa12.7□□□□□ -0.38
CPNE9-201ENST00000273027 CABP1Q9NZU7 370 aa12.7□□□□□ -0.38
CPNE9-201ENST00000273027 WASLO00401 505 aaPredicted RBP12.69□□□□□ -0.38
CPNE9-201ENST00000273027 ZC3H6P61129 1189 aaKnown RBP12.69□□□□□ -0.38
CPNE9-201ENST00000273027 SSH1Q8WYL5 1049 aa12.69□□□□□ -0.38
CPNE9-201ENST00000273027 GCC1Q96CN9 775 aa12.69□□□□□ -0.38
CPNE9-201ENST00000273027 RSPH6AQ9H0K4 717 aa12.69□□□□□ -0.38
CPNE9-201ENST00000273027 ZBTB40Q9NUA8 1239 aa12.69□□□□□ -0.38
CPNE9-201ENST00000273027 THSD7AQ9UPZ6 1657 aa12.68□□□□□ -0.38
CPNE9-201ENST00000273027 ZNF784Q8NCA9 323 aaPredicted RBP12.68□□□□□ -0.38
CPNE9-201ENST00000273027 POLKQ9UBT6 870 aa12.68□□□□□ -0.38
CPNE9-201ENST00000273027 KIAA0232Q92628 1395 aa12.68□□□□□ -0.38
CPNE9-201ENST00000273027 NUTM2GQ5VZR2 741 aa12.67□□□□□ -0.38
CPNE9-201ENST00000273027 CCDC61Q9Y6R9 512 aa12.67□□□□□ -0.38
CPNE9-201ENST00000273027 NRKQ7Z2Y5 1582 aa12.67□□□□□ -0.38
CPNE9-201ENST00000273027 SKAP1Q86WV1 359 aa12.66□□□□□ -0.38
CPNE9-201ENST00000273027 ITPRIPQ8IWB1 547 aa12.66□□□□□ -0.38
CPNE9-201ENST00000273027 COG3Q96JB2 828 aa12.66□□□□□ -0.38
CPNE9-201ENST00000273027 API5Q9BZZ5 524 aaKnown RBP12.66□□□□□ -0.38
CPNE9-201ENST00000273027 NOB1Q9ULX3 412 aaKnown RBP12.66□□□□□ -0.38
CPNE9-201ENST00000273027 PRR36Q9H6K5 1346 aa12.65□□□□□ -0.38
CPNE9-201ENST00000273027 DLG5Q8TDM6 1919 aa12.65□□□□□ -0.38
CPNE9-201ENST00000273027 ZNF853P0CG23 659 aa12.65□□□□□ -0.38
CPNE9-201ENST00000273027 PTMSP20962 102 aa12.65□□□□□ -0.38
CPNE9-201ENST00000273027 BARGINQ6ZT62 677 aa12.65□□□□□ -0.38
CPNE9-201ENST00000273027 TOPAZ1Q8N9V7 1692 aa12.64□□□□□ -0.39
CPNE9-201ENST00000273027 PHRF1Q9P1Y6 1649 aaKnown RBP12.64□□□□□ -0.39
CPNE9-201ENST00000273027 PRKAR2BP31323 418 aa12.64□□□□□ -0.39
CPNE9-201ENST00000273027 NUCB1Q02818 461 aa12.64□□□□□ -0.39
CPNE9-201ENST00000273027 LARP1Q6PKG0 1096 aaKnown RBP12.64□□□□□ -0.39
CPNE9-201ENST00000273027 TSR2Q969E8 191 aaKnown RBP12.64□□□□□ -0.39
CPNE9-201ENST00000273027 IL13P35225 146 aa12.63□□□□□ -0.39
CPNE9-201ENST00000273027 BCL2L13Q9BXK5 485 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms