RNA–Protein interactions for RNA: ENST00000269724.5

SAMD1-201, Transcript of sterile alpha motif domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene SAMD1, Length 750 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD1-201ENST00000269724 PPP2R1AP30153 589 aa25.85■■□□□ 1.73
SAMD1-201ENST00000269724 PKD1L3Q7Z443 1732 aa25.85■■□□□ 1.73
SAMD1-201ENST00000269724 TNS1Q9HBL0 1735 aaKnown RBP25.85■■□□□ 1.73
SAMD1-201ENST00000269724 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.84■■□□□ 1.738e-12■■■□□ 17.5
SAMD1-201ENST00000269724 DIAPH1O60610 1272 aaKnown RBP25.83■■□□□ 1.73
SAMD1-201ENST00000269724 RALBP1Q15311 655 aa25.83■■□□□ 1.73
SAMD1-201ENST00000269724 CFAP53Q96M91 514 aa25.83■■□□□ 1.73
SAMD1-201ENST00000269724 COL3A1P02461 1466 aaPredicted RBP25.83■■□□□ 1.73
SAMD1-201ENST00000269724 KDRP35968 1356 aa25.82■■□□□ 1.72
SAMD1-201ENST00000269724 TRIM37O94972 964 aa25.82■■□□□ 1.72
SAMD1-201ENST00000269724 DDX54Q8TDD1 881 aaKnown RBP25.81■■□□□ 1.72
SAMD1-201ENST00000269724 PCDH11XQ9BZA7 1347 aa25.81■■□□□ 1.72
SAMD1-201ENST00000269724 PCDH11YQ9BZA8 1340 aa25.81■■□□□ 1.72
SAMD1-201ENST00000269724 BAG6P46379 1132 aa25.8■■□□□ 1.72
SAMD1-201ENST00000269724 SPG7Q9UQ90 795 aa25.8■■□□□ 1.72
SAMD1-201ENST00000269724 BCL11BQ9C0K0 894 aaPredicted RBP25.79■■□□□ 1.72
SAMD1-201ENST00000269724 NHSQ6T4R5 1651 aa25.77■■□□□ 1.72
SAMD1-201ENST00000269724 SULT6B1Q6IMI4 303 aa25.77■■□□□ 1.72
SAMD1-201ENST00000269724 APBA3O96018 575 aa25.74■■□□□ 1.71
SAMD1-201ENST00000269724 AMOTQ4VCS5 1084 aa25.74■■□□□ 1.71
SAMD1-201ENST00000269724 AEBP1Q8IUX7 1158 aa25.74■■□□□ 1.71
SAMD1-201ENST00000269724 RGPD3A6NKT7 1758 aaPredicted RBP25.74■■□□□ 1.71
SAMD1-201ENST00000269724 RGPD4Q7Z3J3 1758 aa25.74■■□□□ 1.71
SAMD1-201ENST00000269724 PLEKHO1Q53GL0 409 aaPredicted RBP25.73■■□□□ 1.71
SAMD1-201ENST00000269724 DEFB132Q7Z7B7 95 aa25.73■■□□□ 1.71
SAMD1-201ENST00000269724 NUDCQ9Y266 331 aa25.73■■□□□ 1.71
SAMD1-201ENST00000269724 KAT6BQ8WYB5 2073 aa25.73■■□□□ 1.71
SAMD1-201ENST00000269724 CYP27B1O15528 508 aa25.72■■□□□ 1.71
SAMD1-201ENST00000269724 NKX1-1Q15270 411 aaPredicted RBP25.71■■□□□ 1.71
SAMD1-201ENST00000269724 MYBBP1AQ9BQG0 1328 aaKnown RBP25.7■■□□□ 1.71
SAMD1-201ENST00000269724 PLSCR1O15162 318 aa25.7■■□□□ 1.7
SAMD1-201ENST00000269724 IFNL2Q8IZJ0 200 aa25.7■■□□□ 1.7
SAMD1-201ENST00000269724 DOT1LQ8TEK3 1739 aa25.7■■□□□ 1.7
SAMD1-201ENST00000269724 U2SURPO15042 1029 aaKnown RBP25.68■■□□□ 1.7
SAMD1-201ENST00000269724 KCNQ2O43526 872 aa25.68■■□□□ 1.7
SAMD1-201ENST00000269724 EN1Q05925 392 aaPredicted RBP25.68■■□□□ 1.7
SAMD1-201ENST00000269724 ACSBG1Q96GR2 724 aa25.68■■□□□ 1.7
SAMD1-201ENST00000269724 CAMKK2Q96RR4 588 aa25.68■■□□□ 1.7
SAMD1-201ENST00000269724 PRKRIP1Q9H875 184 aaPredicted RBP25.68■■□□□ 1.7
SAMD1-201ENST00000269724 HMOX1P09601 288 aa25.67■■□□□ 1.7
SAMD1-201ENST00000269724 PHKG2P15735 406 aa25.67■■□□□ 1.7
SAMD1-201ENST00000269724 BTAF1O14981 1849 aa25.66■■□□□ 1.7
SAMD1-201ENST00000269724 HSP90AB1P08238 724 aaKnown RBP25.66■■□□□ 1.7
SAMD1-201ENST00000269724 PTF1AQ7RTS3 328 aa25.66■■□□□ 1.7
SAMD1-201ENST00000269724 PRIM1P49642 420 aaKnown RBP25.64■■□□□ 1.7
SAMD1-201ENST00000269724 RREB1Q92766 1687 aa25.64■■□□□ 1.69
SAMD1-201ENST00000269724 EZH2Q15910 746 aaKnown RBP25.62■■□□□ 1.69
SAMD1-201ENST00000269724 ZNF530Q6P9A1 599 aaPredicted RBP25.62■■□□□ 1.69
SAMD1-201ENST00000269724 TOGARAM1Q9Y4F4 1720 aa25.62■■□□□ 1.69
SAMD1-201ENST00000269724 ITGB4P16144 1822 aa25.61■■□□□ 1.69
SAMD1-201ENST00000269724 FCHSD2O94868 740 aa25.61■■□□□ 1.69
SAMD1-201ENST00000269724 U2AF1L5P0DN76 240 aaPredicted RBP25.61■■□□□ 1.69
SAMD1-201ENST00000269724 U2AF1Q01081 240 aaKnown RBP eCLIP25.61■■□□□ 1.69
SAMD1-201ENST00000269724 C1orf141Q5JVX7 400 aa25.61■■□□□ 1.69
SAMD1-201ENST00000269724 SYTL4Q96C24 671 aaPredicted RBP25.6■■□□□ 1.69
SAMD1-201ENST00000269724 DCAF5Q96JK2 942 aa25.6■■□□□ 1.69
SAMD1-201ENST00000269724 RSPH6AQ9H0K4 717 aa25.59■■□□□ 1.69
SAMD1-201ENST00000269724 AKAP4Q5JQC9 854 aa25.58■■□□□ 1.69
SAMD1-201ENST00000269724 ERVV-2B6SEH9 535 aa25.57■■□□□ 1.68
SAMD1-201ENST00000269724 NUP188Q5SRE5 1749 aa25.57■■□□□ 1.68
SAMD1-201ENST00000269724 GAS2L2Q8NHY3 880 aa25.56■■□□□ 1.68
SAMD1-201ENST00000269724 PRKAR2BP31323 418 aa25.55■■□□□ 1.68
SAMD1-201ENST00000269724 MTHFSDQ2M296 383 aaKnown RBP25.55■■□□□ 1.68
SAMD1-201ENST00000269724 MPRIPQ6WCQ1 1025 aa25.54■■□□□ 1.68
SAMD1-201ENST00000269724 PROM2Q8N271 834 aa25.54■■□□□ 1.68
SAMD1-201ENST00000269724 PNNQ9H307 717 aaKnown RBP25.54■■□□□ 1.68
SAMD1-201ENST00000269724 LY75O60449 1722 aa25.54■■□□□ 1.68
SAMD1-201ENST00000269724 SCN11AQ9UI33 1791 aa25.54■■□□□ 1.68
SAMD1-201ENST00000269724 KDM6AO15550 1401 aaPredicted RBP25.54■■□□□ 1.68
SAMD1-201ENST00000269724 TXNRD1Q16881 649 aa25.53■■□□□ 1.68
SAMD1-201ENST00000269724 TMOD3Q9NYL9 352 aa25.53■■□□□ 1.68
SAMD1-201ENST00000269724 SLC27A3Q5K4L6 730 aa25.52■■□□□ 1.68
SAMD1-201ENST00000269724 PIGBQ92521 554 aa25.52■■□□□ 1.68
SAMD1-201ENST00000269724 ADAMTS7Q9UKP4 1686 aa25.52■■□□□ 1.68
SAMD1-201ENST00000269724 ANP32CO43423 234 aa25.51■■□□□ 1.67
SAMD1-201ENST00000269724 NBPF14Q5TI25 921 aa25.5■■□□□ 1.67
SAMD1-201ENST00000269724 SMARCC1Q92922 1105 aaPredicted RBP25.5■■□□□ 1.67
SAMD1-201ENST00000269724 VIRMAQ69YN4 1812 aaKnown RBP25.49■■□□□ 1.67
SAMD1-201ENST00000269724 NEFMP07197 916 aa25.49■■□□□ 1.67
SAMD1-201ENST00000269724 HMGB2P26583 209 aaKnown RBP25.49■■□□□ 1.67
SAMD1-201ENST00000269724 PHACTR3Q96KR7 559 aa25.49■■□□□ 1.67
SAMD1-201ENST00000269724 MAP3K5Q99683 1374 aa25.47■■□□□ 1.67
SAMD1-201ENST00000269724 GNAT3A8MTJ3 354 aa25.47■■□□□ 1.67
SAMD1-201ENST00000269724 CABP4P57796 275 aa25.47■■□□□ 1.67
SAMD1-201ENST00000269724 PLEKHF1Q96S99 279 aa25.46■■□□□ 1.67
SAMD1-201ENST00000269724 MRC1P22897 1456 aa25.46■■□□□ 1.67
SAMD1-201ENST00000269724 PALLDQ8WX93 1383 aa25.45■■□□□ 1.67
SAMD1-201ENST00000269724 RNMTO43148 476 aaKnown RBP25.45■■□□□ 1.66
SAMD1-201ENST00000269724 WDR43Q15061 677 aaKnown RBP eCLIP25.44■■□□□ 1.66
SAMD1-201ENST00000269724 PAPPAQ13219 1627 aa25.44■■□□□ 1.66
SAMD1-201ENST00000269724 HTATSF1O43719 755 aaKnown RBP25.42■■□□□ 1.66
SAMD1-201ENST00000269724 NFATC2IPQ8NCF5 419 aa25.42■■□□□ 1.66
SAMD1-201ENST00000269724 SLC52A2Q9HAB3 445 aa25.42■■□□□ 1.66
SAMD1-201ENST00000269724 LGR6Q9HBX8 967 aa25.42■■□□□ 1.66
SAMD1-201ENST00000269724 LRRC4BQ9NT99 713 aa25.42■■□□□ 1.66
SAMD1-201ENST00000269724 ATG3Q9NT62 314 aa25.41■■□□□ 1.66
SAMD1-201ENST00000269724 CCNL1Q9UK58 526 aaPredicted RBP25.41■■□□□ 1.66
SAMD1-201ENST00000269724 MAPK8IP3Q9UPT6 1336 aa25.4■■□□□ 1.66
SAMD1-201ENST00000269724 ZNF831Q5JPB2 1677 aa25.4■■□□□ 1.66
SAMD1-201ENST00000269724 ASAP1Q9ULH1 1129 aa25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms