RNA–Protein interactions for RNA: ENST00000267064.8

SMARCC2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMARCC2, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-201ENST00000267064 STRN4Q9NRL3 753 aa23.46■■□□□ 1.35
SMARCC2-201ENST00000267064 TMEM94Q12767 1356 aa23.46■■□□□ 1.35
SMARCC2-201ENST00000267064 PTCH1Q13635 1447 aa23.46■■□□□ 1.35
SMARCC2-201ENST00000267064 AAMPQ13685 434 aa23.45■■□□□ 1.35
SMARCC2-201ENST00000267064 SPRYD3Q8NCJ5 442 aa23.45■■□□□ 1.35
SMARCC2-201ENST00000267064 IQSEC2Q5JU85 1478 aa23.45■■□□□ 1.34
SMARCC2-201ENST00000267064 ARHGAP23Q9P227 1491 aa23.45■■□□□ 1.34
SMARCC2-201ENST00000267064 TAF7Q15545 349 aaPredicted RBP23.45■■□□□ 1.34
SMARCC2-201ENST00000267064 SETD1BQ9UPS6 1966 aaKnown RBP23.45■■□□□ 1.34
SMARCC2-201ENST00000267064 PRDM11Q9NQV5 511 aa23.44■■□□□ 1.34
SMARCC2-201ENST00000267064 ANXA1P04083 346 aa23.44■■□□□ 1.34
SMARCC2-201ENST00000267064 CCDC30Q5VVM6 783 aa23.44■■□□□ 1.34
SMARCC2-201ENST00000267064 EVA1CP58658 441 aa23.44■■□□□ 1.34
SMARCC2-201ENST00000267064 NCBP3Q53F19 620 aaKnown RBP23.44■■□□□ 1.34
SMARCC2-201ENST00000267064 COL3A1P02461 1466 aaPredicted RBP23.43■■□□□ 1.34
SMARCC2-201ENST00000267064 ZNF330Q9Y3S2 320 aaPredicted RBP23.43■■□□□ 1.34
SMARCC2-201ENST00000267064 CHL1O00533 1208 aa23.43■■□□□ 1.34
SMARCC2-201ENST00000267064 AIMP1Q12904 312 aaKnown RBP23.43■■□□□ 1.34
SMARCC2-201ENST00000267064 SLIT1O75093 1534 aa23.43■■□□□ 1.34
SMARCC2-201ENST00000267064 BTBD11A6QL63 1104 aa23.42■■□□□ 1.34
SMARCC2-201ENST00000267064 LGR6Q9HBX8 967 aa23.42■■□□□ 1.34
SMARCC2-201ENST00000267064 DIP2AQ14689 1571 aa23.41■■□□□ 1.34
SMARCC2-201ENST00000267064 MAP2P11137 1827 aaKnown RBP23.41■■□□□ 1.34
SMARCC2-201ENST00000267064 USP32Q8NFA0 1604 aa23.41■■□□□ 1.34
SMARCC2-201ENST00000267064 OVOS2A0A0J9YW53 1432 aa23.4■■□□□ 1.34
SMARCC2-201ENST00000267064 OVOS2Q6IE36 1432 aa23.4■■□□□ 1.34
SMARCC2-201ENST00000267064 G2E3Q7L622 706 aa23.4■■□□□ 1.34
SMARCC2-201ENST00000267064 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.4■■□□□ 1.34
SMARCC2-201ENST00000267064 MSH6P52701 1360 aa23.39■■□□□ 1.33
SMARCC2-201ENST00000267064 ZBTB40Q9NUA8 1239 aa23.39■■□□□ 1.33
SMARCC2-201ENST00000267064 TOM1L2Q6ZVM7 507 aa23.38■■□□□ 1.33
SMARCC2-201ENST00000267064 IL17REQ8NFR9 667 aa23.38■■□□□ 1.33
SMARCC2-201ENST00000267064 TATP17735 454 aaPredicted RBP23.38■■□□□ 1.33
SMARCC2-201ENST00000267064 OS9Q13438 667 aaPredicted RBP23.38■■□□□ 1.33
SMARCC2-201ENST00000267064 SHPRHQ149N8 1683 aa23.38■■□□□ 1.33
SMARCC2-201ENST00000267064 IGSF1Q8N6C5 1336 aa23.38■■□□□ 1.33
SMARCC2-201ENST00000267064 ZNF853P0CG23 659 aa23.37■■□□□ 1.33
SMARCC2-201ENST00000267064 NPHP3Q7Z494 1330 aa23.36■■□□□ 1.33
SMARCC2-201ENST00000267064 ANKARQ7Z5J8 1434 aa23.36■■□□□ 1.33
SMARCC2-201ENST00000267064 ARHGEF10O15013 1369 aa23.36■■□□□ 1.33
SMARCC2-201ENST00000267064 ADGRL3Q9HAR2 1447 aa23.36■■□□□ 1.33
SMARCC2-201ENST00000267064 HSP90AA1P07900 732 aaKnown RBP23.35■■□□□ 1.33
SMARCC2-201ENST00000267064 DDX54Q8TDD1 881 aaKnown RBP23.35■■□□□ 1.33
SMARCC2-201ENST00000267064 MEIS3Q99687 375 aa23.35■■□□□ 1.33
SMARCC2-201ENST00000267064 HMMRO75330 724 aa23.35■■□□□ 1.33
SMARCC2-201ENST00000267064 USP31Q70CQ4 1352 aa23.34■■□□□ 1.33
SMARCC2-201ENST00000267064 SLKQ9H2G2 1235 aaPredicted RBP23.34■■□□□ 1.33
SMARCC2-201ENST00000267064 FLIIQ13045 1269 aa23.34■■□□□ 1.33
SMARCC2-201ENST00000267064 BECN1Q14457 450 aa23.33■■□□□ 1.33
SMARCC2-201ENST00000267064 CHD1LQ86WJ1 897 aa23.33■■□□□ 1.33
SMARCC2-201ENST00000267064 TTC5Q8N0Z6 440 aa23.33■■□□□ 1.33
SMARCC2-201ENST00000267064 ZBTB7BO15156 539 aaPredicted RBP23.33■■□□□ 1.33
SMARCC2-201ENST00000267064 C8orf34Q49A92 452 aa23.33■■□□□ 1.33
SMARCC2-201ENST00000267064 MAP3K5Q99683 1374 aa23.33■■□□□ 1.32
SMARCC2-201ENST00000267064 KIF20BQ96Q89 1820 aa23.33■■□□□ 1.32
SMARCC2-201ENST00000267064 ARHGAP45Q92619 1136 aa23.33■■□□□ 1.32
SMARCC2-201ENST00000267064 AXIN2Q9Y2T1 843 aa23.33■■□□□ 1.32
SMARCC2-201ENST00000267064 SLC39A6Q13433 755 aa23.32■■□□□ 1.32
SMARCC2-201ENST00000267064 ARHGEF25Q86VW2 580 aa23.32■■□□□ 1.32
SMARCC2-201ENST00000267064 KCNQ3O43525 872 aa23.31■■□□□ 1.32
SMARCC2-201ENST00000267064 ZNF335Q9H4Z2 1342 aaPredicted RBP23.31■■□□□ 1.32
SMARCC2-201ENST00000267064 SMARCA5O60264 1052 aaPredicted RBP23.31■■□□□ 1.32
SMARCC2-201ENST00000267064 AMOTQ4VCS5 1084 aa23.3■■□□□ 1.32
SMARCC2-201ENST00000267064 MYL6BP14649 208 aa23.3■■□□□ 1.32
SMARCC2-201ENST00000267064 SEC24BO95487 1268 aa23.29■■□□□ 1.32
SMARCC2-201ENST00000267064 ITSN1Q15811 1721 aa23.29■■□□□ 1.32
SMARCC2-201ENST00000267064 CCDC9Q9Y3X0 531 aaKnown RBP23.28■■□□□ 1.32
SMARCC2-201ENST00000267064 PHAXQ9H814 394 aaKnown RBP23.28■■□□□ 1.32
SMARCC2-201ENST00000267064 C9orf78Q9NZ63 289 aaPredicted RBP23.28■■□□□ 1.32
SMARCC2-201ENST00000267064 UBTFL1P0CB47 393 aaPredicted RBP23.28■■□□□ 1.32
SMARCC2-201ENST00000267064 HDAC1Q13547 482 aaPredicted RBP23.28■■□□□ 1.32
SMARCC2-201ENST00000267064 EXOC6BQ9Y2D4 811 aa23.28■■□□□ 1.32
SMARCC2-201ENST00000267064 SPG7Q9UQ90 795 aa23.27■■□□□ 1.32
SMARCC2-201ENST00000267064 CCT4P50991 539 aaKnown RBP23.27■■□□□ 1.32
SMARCC2-201ENST00000267064 GCC1Q96CN9 775 aa23.27■■□□□ 1.32
SMARCC2-201ENST00000267064 CHPF2Q9P2E5 772 aa23.27■■□□□ 1.32
SMARCC2-201ENST00000267064 MYT1Q01538 1121 aa23.26■■□□□ 1.31
SMARCC2-201ENST00000267064 AKAP4Q5JQC9 854 aa23.26■■□□□ 1.31
SMARCC2-201ENST00000267064 GNAI2P04899 355 aa23.26■■□□□ 1.31
SMARCC2-201ENST00000267064 PIP4K2AP48426 406 aaPredicted RBP23.26■■□□□ 1.31
SMARCC2-201ENST00000267064 SYTL4Q96C24 671 aaPredicted RBP23.25■■□□□ 1.31
SMARCC2-201ENST00000267064 SLAIN2Q9P270 581 aa23.25■■□□□ 1.31
SMARCC2-201ENST00000267064 SETD1AO15047 1707 aaKnown RBP23.25■■□□□ 1.31
SMARCC2-201ENST00000267064 HTATSF1O43719 755 aaKnown RBP23.25■■□□□ 1.31
SMARCC2-201ENST00000267064 TRIM6-TRIM34B2RNG4 842 aa23.24■■□□□ 1.31
SMARCC2-201ENST00000267064 PTPRCP08575 1304 aa23.24■■□□□ 1.31
SMARCC2-201ENST00000267064 CABP4P57796 275 aa23.23■■□□□ 1.31
SMARCC2-201ENST00000267064 CHMP4AQ9BY43 222 aa23.23■■□□□ 1.31
SMARCC2-201ENST00000267064 PI4KAP2A4QPH2 592 aa23.23■■□□□ 1.31
SMARCC2-201ENST00000267064 GNAI3P08754 354 aa23.23■■□□□ 1.31
SMARCC2-201ENST00000267064 RIC3Q7Z5B4 369 aa23.23■■□□□ 1.31
SMARCC2-201ENST00000267064 PI4KAP1Q8N8J0 262 aa23.23■■□□□ 1.31
SMARCC2-201ENST00000267064 NFATC2IPQ8NCF5 419 aa23.23■■□□□ 1.31
SMARCC2-201ENST00000267064 SRCIN1Q9C0H9 1055 aa23.23■■□□□ 1.31
SMARCC2-201ENST00000267064 C16orf71Q8IYS4 520 aaPredicted RBP23.22■■□□□ 1.31
SMARCC2-201ENST00000267064 RNMTO43148 476 aaKnown RBP23.21■■□□□ 1.31
SMARCC2-201ENST00000267064 PTCD1O75127 700 aaKnown RBP23.21■■□□□ 1.31
SMARCC2-201ENST00000267064 PIP4K2BP78356 416 aa23.21■■□□□ 1.31
SMARCC2-201ENST00000267064 CASC1Q6TDU7 716 aa23.21■■□□□ 1.31
SMARCC2-201ENST00000267064 SMC5Q8IY18 1101 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms