RNA–Protein interactions for RNA: ENST00000265993.13

TCTN3-201, Transcript of tectonic family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCTN3, Length 2,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCTN3-201ENST00000265993 GZF1Q9H116 711 aaPredicted RBP13.59□□□□□ -0.23
TCTN3-201ENST00000265993 EID1Q9Y6B2 187 aa13.59□□□□□ -0.23
TCTN3-201ENST00000265993 TOPAZ1Q8N9V7 1692 aa13.59□□□□□ -0.23
TCTN3-201ENST00000265993 RGS12O14924 1447 aa13.58□□□□□ -0.23
TCTN3-201ENST00000265993 SMARCA5O60264 1052 aaPredicted RBP13.58□□□□□ -0.24
TCTN3-201ENST00000265993 GSPT1P15170 499 aaKnown RBP13.58□□□□□ -0.24
TCTN3-201ENST00000265993 SLC4A10Q6U841 1118 aa13.58□□□□□ -0.24
TCTN3-201ENST00000265993 HSCBQ8IWL3 235 aa13.58□□□□□ -0.24
TCTN3-201ENST00000265993 NECTIN2Q92692 538 aa13.58□□□□□ -0.24
TCTN3-201ENST00000265993 KIF2CQ99661 725 aa13.58□□□□□ -0.24
TCTN3-201ENST00000265993 RBM25P49756 843 aaKnown RBP13.57□□□□□ -0.24
TCTN3-201ENST00000265993 LTV1Q96GA3 475 aaPredicted RBP13.57□□□□□ -0.24
TCTN3-201ENST00000265993 AMPHP49418 695 aa13.57□□□□□ -0.24
TCTN3-201ENST00000265993 EYA1Q99502 592 aa13.57□□□□□ -0.24
TCTN3-201ENST00000265993 PLEKHG5O94827 1062 aa13.56□□□□□ -0.24
TCTN3-201ENST00000265993 NLRP6P59044 892 aa13.56□□□□□ -0.24
TCTN3-201ENST00000265993 INTS3Q68E01 1043 aaKnown RBP13.56□□□□□ -0.24
TCTN3-201ENST00000265993 PLEKHM2Q8IWE5 1019 aa13.56□□□□□ -0.24
TCTN3-201ENST00000265993 CHMP4BQ9H444 224 aaKnown RBP13.56□□□□□ -0.24
TCTN3-201ENST00000265993 TSPYL4Q9UJ04 414 aa13.56□□□□□ -0.24
TCTN3-201ENST00000265993 AK9Q5TCS8 1911 aa13.56□□□□□ -0.24
TCTN3-201ENST00000265993 NALCNQ8IZF0 1738 aa13.56□□□□□ -0.24
TCTN3-201ENST00000265993 ATP10DQ9P241 1426 aa13.56□□□□□ -0.24
TCTN3-201ENST00000265993 CEP170BQ9Y4F5 1589 aaPredicted RBP13.55□□□□□ -0.24
TCTN3-201ENST00000265993 SSH2Q76I76 1423 aa13.55□□□□□ -0.24
TCTN3-201ENST00000265993 RGPD1P0DJD0 1748 aa13.55□□□□□ -0.24
TCTN3-201ENST00000265993 USP31Q70CQ4 1352 aa13.55□□□□□ -0.24
TCTN3-201ENST00000265993 CRB1P82279 1406 aa13.55□□□□□ -0.24
TCTN3-201ENST00000265993 KCNA6P17658 529 aa13.55□□□□□ -0.24
TCTN3-201ENST00000265993 MCM4P33991 863 aa13.55□□□□□ -0.24
TCTN3-201ENST00000265993 CEP85Q6P2H3 762 aa13.55□□□□□ -0.24
TCTN3-201ENST00000265993 C14orf37Q86TY3 774 aa13.55□□□□□ -0.24
TCTN3-201ENST00000265993 RTF1Q92541 710 aaKnown RBP13.55□□□□□ -0.24
TCTN3-201ENST00000265993 DCTPP1Q9H773 170 aa13.55□□□□□ -0.24
TCTN3-201ENST00000265993 USHBP1Q8N6Y0 703 aa13.54□□□□□ -0.24
TCTN3-201ENST00000265993 CHMP5Q9NZZ3 219 aa13.54□□□□□ -0.24
TCTN3-201ENST00000265993 FMN2Q9NZ56 1722 aa13.53□□□□□ -0.24
TCTN3-201ENST00000265993 RTL1A6NKG5 1358 aa13.53□□□□□ -0.24
TCTN3-201ENST00000265993 FLT4P35916 1363 aa13.53□□□□□ -0.24
TCTN3-201ENST00000265993 ANKRD44Q8N8A2 993 aa13.53□□□□□ -0.24
TCTN3-201ENST00000265993 HSP90AB1P08238 724 aaKnown RBP13.52□□□□□ -0.24
TCTN3-201ENST00000265993 DIP2AQ14689 1571 aa13.52□□□□□ -0.24
TCTN3-201ENST00000265993 TSHZ3Q63HK5 1081 aa13.52□□□□□ -0.25
TCTN3-201ENST00000265993 PIK3C2AO00443 1686 aa13.52□□□□□ -0.25
TCTN3-201ENST00000265993 SBNO1A3KN83 1393 aa13.51□□□□□ -0.25
TCTN3-201ENST00000265993 KIAA0232Q92628 1395 aa13.51□□□□□ -0.25
TCTN3-201ENST00000265993 CDC45O75419 566 aa13.51□□□□□ -0.25
TCTN3-201ENST00000265993 ABTB2Q8N961 1025 aa13.51□□□□□ -0.25
TCTN3-201ENST00000265993 TBX22Q9Y458 520 aa13.51□□□□□ -0.25
TCTN3-201ENST00000265993 HSP90AA1P07900 732 aaKnown RBP13.5□□□□□ -0.25
TCTN3-201ENST00000265993 TTC22Q5TAA0 569 aa13.5□□□□□ -0.25
TCTN3-201ENST00000265993 TTC21AQ8NDW8 1320 aa13.5□□□□□ -0.25
TCTN3-201ENST00000265993 ARHGEF10O15013 1369 aa13.5□□□□□ -0.25
TCTN3-201ENST00000265993 ZBTB7CA1YPR0 619 aa13.5□□□□□ -0.25
TCTN3-201ENST00000265993 IGSF1Q8N6C5 1336 aa13.5□□□□□ -0.25
TCTN3-201ENST00000265993 EXOC6BQ9Y2D4 811 aa13.49□□□□□ -0.25
TCTN3-201ENST00000265993 HOXC9P31274 260 aa13.49□□□□□ -0.25
TCTN3-201ENST00000265993 PTPRCP08575 1304 aa13.49□□□□□ -0.25
TCTN3-201ENST00000265993 KDRP35968 1356 aa13.49□□□□□ -0.25
TCTN3-201ENST00000265993 SDSP20132 328 aa13.48□□□□□ -0.25
TCTN3-201ENST00000265993 DDIT3P35638 169 aa13.48□□□□□ -0.25
TCTN3-201ENST00000265993 RPAP2Q8IXW5 612 aaPredicted RBP13.48□□□□□ -0.25
TCTN3-201ENST00000265993 TNPO1Q92973 898 aaKnown RBP13.48□□□□□ -0.25
TCTN3-201ENST00000265993 SNX21Q969T3 373 aa13.48□□□□□ -0.25
TCTN3-201ENST00000265993 NCOA3Q9Y6Q9 1424 aa13.48□□□□□ -0.25
TCTN3-201ENST00000265993 TRAK2O60296 914 aa13.48□□□□□ -0.25
TCTN3-201ENST00000265993 FKBP5Q13451 457 aaPredicted RBP13.48□□□□□ -0.25
TCTN3-201ENST00000265993 THEMISQ8N1K5 641 aaPredicted RBP13.48□□□□□ -0.25
TCTN3-201ENST00000265993 GAS2L2Q8NHY3 880 aa13.48□□□□□ -0.25
TCTN3-201ENST00000265993 HAP1P54257 671 aaPredicted RBP13.48□□□□□ -0.25
TCTN3-201ENST00000265993 IL17REQ8NFR9 667 aa13.48□□□□□ -0.25
TCTN3-201ENST00000265993 SLIT1O75093 1534 aa13.47□□□□□ -0.25
TCTN3-201ENST00000265993 ARHGAP23Q9P227 1491 aa13.47□□□□□ -0.25
TCTN3-201ENST00000265993 FER1L4A9Z1Z3 1794 aa13.47□□□□□ -0.25
TCTN3-201ENST00000265993 KIF24Q5T7B8 1368 aa13.47□□□□□ -0.25
TCTN3-201ENST00000265993 K7ELQ4 463 aaPredicted RBP13.46□□□□□ -0.25
TCTN3-201ENST00000265993 FLIIQ13045 1269 aa13.46□□□□□ -0.25
TCTN3-201ENST00000265993 PANK2Q9BZ23 570 aa13.46□□□□□ -0.25
TCTN3-201ENST00000265993 PNMA6EA0A0J9YXQ4 647 aa13.46□□□□□ -0.26
TCTN3-201ENST00000265993 GNAT3A8MTJ3 354 aa13.46□□□□□ -0.26
TCTN3-201ENST00000265993 STK31Q9BXU1 1019 aa13.46□□□□□ -0.26
TCTN3-201ENST00000265993 MARF1Q9Y4F3 1742 aaKnown RBP13.44□□□□□ -0.26
TCTN3-201ENST00000265993 XPCQ01831 940 aaPredicted RBP13.44□□□□□ -0.26
TCTN3-201ENST00000265993 AEBP2Q6ZN18 517 aaPredicted RBP13.44□□□□□ -0.26
TCTN3-201ENST00000265993 USP26Q9BXU7 913 aa13.44□□□□□ -0.26
TCTN3-201ENST00000265993 PHAXQ9H814 394 aaKnown RBP13.44□□□□□ -0.26
TCTN3-201ENST00000265993 XRCC6P12956 609 aaKnown RBP eCLIP13.43□□□□□ -0.26
TCTN3-201ENST00000265993 SSFA2P28290 1259 aa13.43□□□□□ -0.26
TCTN3-201ENST00000265993 EIF2S2P20042 333 aaKnown RBP13.42□□□□□ -0.26
TCTN3-201ENST00000265993 NWD1Q149M9 1564 aa13.42□□□□□ -0.26
TCTN3-201ENST00000265993 ANXA1P04083 346 aa13.42□□□□□ -0.26
TCTN3-201ENST00000265993 GNAI2P04899 355 aa13.42□□□□□ -0.26
TCTN3-201ENST00000265993 CCT4P50991 539 aaKnown RBP13.42□□□□□ -0.26
TCTN3-201ENST00000265993 PDE1AP54750 535 aa13.42□□□□□ -0.26
TCTN3-201ENST00000265993 RAB3GAP1Q15042 981 aa13.42□□□□□ -0.26
TCTN3-201ENST00000265993 XRN1Q8IZH2 1706 aaKnown RBP13.41□□□□□ -0.26
TCTN3-201ENST00000265993 TRHP20396 242 aaPredicted RBP13.41□□□□□ -0.26
TCTN3-201ENST00000265993 PKP1Q13835 747 aa13.41□□□□□ -0.26
TCTN3-201ENST00000265993 LRRC59Q96AG4 307 aaKnown RBP13.41□□□□□ -0.26
TCTN3-201ENST00000265993 LGR6Q9HBX8 967 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms