RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 LTV1Q96GA3 475 aaPredicted RBP20.7■□□□□ 0.9
SQLE-201ENST00000265896 CCDC61Q9Y6R9 512 aa20.7■□□□□ 0.9
SQLE-201ENST00000265896 PRR36Q9H6K5 1346 aa20.69■□□□□ 0.9
SQLE-201ENST00000265896 GDPD2Q9HCC8 539 aa20.69■□□□□ 0.9
SQLE-201ENST00000265896 CIZ1Q9ULV3 898 aaPredicted RBP20.69■□□□□ 0.9
SQLE-201ENST00000265896 ALKQ9UM73 1620 aa20.69■□□□□ 0.9
SQLE-201ENST00000265896 MAP2P11137 1827 aaKnown RBP20.69■□□□□ 0.9
SQLE-201ENST00000265896 PTCH1Q13635 1447 aa20.68■□□□□ 0.9
SQLE-201ENST00000265896 NEK4P51957 841 aa20.68■□□□□ 0.9
SQLE-201ENST00000265896 ANKRD44Q8N8A2 993 aa20.68■□□□□ 0.9
SQLE-201ENST00000265896 MED14O60244 1454 aa20.68■□□□□ 0.9
SQLE-201ENST00000265896 TRIM6-TRIM34B2RNG4 842 aa20.68■□□□□ 0.9
SQLE-201ENST00000265896 SLC26A8Q96RN1 970 aa20.68■□□□□ 0.9
SQLE-201ENST00000265896 UPF3BQ9BZI7 483 aaKnown RBP20.68■□□□□ 0.9
SQLE-201ENST00000265896 DIP2CQ9Y2E4 1556 aa20.68■□□□□ 0.9
SQLE-201ENST00000265896 INTS3Q68E01 1043 aaKnown RBP20.67■□□□□ 0.9
SQLE-201ENST00000265896 ZFYVE9O95405 1425 aa20.67■□□□□ 0.9
SQLE-201ENST00000265896 CPS1P31327 1500 aa20.67■□□□□ 0.9
SQLE-201ENST00000265896 TSPYL4Q9UJ04 414 aa20.67■□□□□ 0.9
SQLE-201ENST00000265896 PRIM1P49642 420 aaKnown RBP20.66■□□□□ 0.9
SQLE-201ENST00000265896 BRPF1P55201 1214 aaPredicted RBP20.66■□□□□ 0.9
SQLE-201ENST00000265896 LMOD3Q0VAK6 560 aa20.66■□□□□ 0.9
SQLE-201ENST00000265896 RABEP1Q15276 862 aa20.66■□□□□ 0.9
SQLE-201ENST00000265896 CHMP4BQ9H444 224 aaKnown RBP20.66■□□□□ 0.9
SQLE-201ENST00000265896 IL1RAPL2Q9NP60 686 aa20.66■□□□□ 0.9
SQLE-201ENST00000265896 PALD1Q9ULE6 856 aa20.65■□□□□ 0.9
SQLE-201ENST00000265896 CFAP74Q9C0B2 1584 aa20.65■□□□□ 0.9
SQLE-201ENST00000265896 ZSCAN23Q3MJ62 389 aa20.65■□□□□ 0.9
SQLE-201ENST00000265896 RBSNQ9H1K0 784 aa20.65■□□□□ 0.9
SQLE-201ENST00000265896 ZDHHC9Q9Y397 364 aa20.64■□□□□ 0.89
SQLE-201ENST00000265896 SYCE3A1L190 88 aa20.64■□□□□ 0.89
SQLE-201ENST00000265896 SKOR2Q2VWA4 1001 aaPredicted RBP20.64■□□□□ 0.89
SQLE-201ENST00000265896 GPT2Q8TD30 523 aa20.64■□□□□ 0.89
SQLE-201ENST00000265896 ANO2Q9NQ90 1003 aa20.64■□□□□ 0.89
SQLE-201ENST00000265896 MTHFSDQ2M296 383 aaKnown RBP20.63■□□□□ 0.89
SQLE-201ENST00000265896 LMBRD1Q9NUN5 540 aa20.63■□□□□ 0.89
SQLE-201ENST00000265896 RTL1A6NKG5 1358 aa20.63■□□□□ 0.89
SQLE-201ENST00000265896 ESF1Q9H501 851 aaKnown RBP20.63■□□□□ 0.89
SQLE-201ENST00000265896 ACEP12821 1306 aa20.62■□□□□ 0.89
SQLE-201ENST00000265896 TMEM131LA2VDJ0 1609 aa20.62■□□□□ 0.89
SQLE-201ENST00000265896 PNMA6EA0A0J9YXQ4 647 aa20.62■□□□□ 0.89
SQLE-201ENST00000265896 FKBP5Q13451 457 aaPredicted RBP20.62■□□□□ 0.89
SQLE-201ENST00000265896 PIK3R4Q99570 1358 aa20.62■□□□□ 0.89
SQLE-201ENST00000265896 KLHL40Q2TBA0 621 aa20.62■□□□□ 0.89
SQLE-201ENST00000265896 CHL1O00533 1208 aa20.61■□□□□ 0.89
SQLE-201ENST00000265896 UNC5CLQ8IV45 518 aa20.61■□□□□ 0.89
SQLE-201ENST00000265896 UBE2Q2Q8WVN8 375 aa20.61■□□□□ 0.89
SQLE-201ENST00000265896 RBM10P98175 930 aaKnown RBP20.61■□□□□ 0.89
SQLE-201ENST00000265896 CASC1Q6TDU7 716 aa20.61■□□□□ 0.89
SQLE-201ENST00000265896 ANP32BQ92688 251 aaKnown RBP20.61■□□□□ 0.89
SQLE-201ENST00000265896 ATP10DQ9P241 1426 aa20.61■□□□□ 0.89
SQLE-201ENST00000265896 ST18O60284 1047 aa20.61■□□□□ 0.89
SQLE-201ENST00000265896 RTF1Q92541 710 aaKnown RBP20.61■□□□□ 0.89
SQLE-201ENST00000265896 KNDC1Q76NI1 1749 aa20.6■□□□□ 0.89
SQLE-201ENST00000265896 PDE1AP54750 535 aa20.6■□□□□ 0.89
SQLE-201ENST00000265896 HSP90AA2PQ14568 343 aaPredicted RBP20.6■□□□□ 0.89
SQLE-201ENST00000265896 C14orf37Q86TY3 774 aa20.6■□□□□ 0.89
SQLE-201ENST00000265896 USHBP1Q8N6Y0 703 aa20.6■□□□□ 0.89
SQLE-201ENST00000265896 MAP3K19Q56UN5 1328 aa20.6■□□□□ 0.89
SQLE-201ENST00000265896 XPCQ01831 940 aaPredicted RBP20.59■□□□□ 0.89
SQLE-201ENST00000265896 NUTM1Q86Y26 1132 aa20.59■□□□□ 0.89
SQLE-201ENST00000265896 RBM33Q96EV2 1170 aaKnown RBP20.59■□□□□ 0.89
SQLE-201ENST00000265896 IL25Q9H293 177 aa20.59■□□□□ 0.89
SQLE-201ENST00000265896 RPAP2Q8IXW5 612 aaPredicted RBP20.58■□□□□ 0.89
SQLE-201ENST00000265896 DDX54Q8TDD1 881 aaKnown RBP20.58■□□□□ 0.89
SQLE-201ENST00000265896 TMEM63CQ9P1W3 806 aa20.58■□□□□ 0.89
SQLE-201ENST00000265896 ARHGAP31Q2M1Z3 1444 aa20.58■□□□□ 0.89
SQLE-201ENST00000265896 EDC4Q6P2E9 1401 aaKnown RBP20.58■□□□□ 0.89
SQLE-201ENST00000265896 ERC2O15083 957 aa20.58■□□□□ 0.89
SQLE-201ENST00000265896 KIAA1211Q6ZU35 1233 aa20.58■□□□□ 0.89
SQLE-201ENST00000265896 TTC21BQ7Z4L5 1316 aa20.57■□□□□ 0.88
SQLE-201ENST00000265896 CEBPAP49715 358 aaPredicted RBP20.57■□□□□ 0.88
SQLE-201ENST00000265896 TMX3Q96JJ7 454 aa20.57■□□□□ 0.88
SQLE-201ENST00000265896 RGS12O14924 1447 aa20.57■□□□□ 0.88
SQLE-201ENST00000265896 ANXA1P04083 346 aa20.56■□□□□ 0.88
SQLE-201ENST00000265896 VSIG10Q8N0Z9 540 aa20.56■□□□□ 0.88
SQLE-201ENST00000265896 EIF2S2P20042 333 aaKnown RBP20.56■□□□□ 0.88
SQLE-201ENST00000265896 NUCB2P80303 420 aa20.56■□□□□ 0.88
SQLE-201ENST00000265896 AMPHP49418 695 aa20.55■□□□□ 0.88
SQLE-201ENST00000265896 MSNP26038 577 aaKnown RBP20.55■□□□□ 0.88
SQLE-201ENST00000265896 LRRFIP2Q9Y608 721 aaKnown RBP20.55■□□□□ 0.88
SQLE-201ENST00000265896 CPSF1Q10570 1443 aaKnown RBP20.55■□□□□ 0.88
SQLE-201ENST00000265896 REC8O95072 547 aa20.55■□□□□ 0.88
SQLE-201ENST00000265896 PREX1Q8TCU6 1659 aa20.54■□□□□ 0.88
SQLE-201ENST00000265896 R3HCC1Q9Y3T6 440 aaKnown RBP20.54■□□□□ 0.88
SQLE-201ENST00000265896 CPA1P15085 419 aa20.53■□□□□ 0.88
SQLE-201ENST00000265896 A2ML1A8K2U0 1454 aa20.53■□□□□ 0.88
SQLE-201ENST00000265896 KIF20BQ96Q89 1820 aa20.53■□□□□ 0.88
SQLE-201ENST00000265896 ROBO2Q9HCK4 1378 aa20.53■□□□□ 0.88
SQLE-201ENST00000265896 CCDC173Q0VFZ6 552 aa20.53■□□□□ 0.88
SQLE-201ENST00000265896 NGDNQ8NEJ9 315 aaKnown RBP20.52■□□□□ 0.88
SQLE-201ENST00000265896 STK31Q9BXU1 1019 aa20.52■□□□□ 0.88
SQLE-201ENST00000265896 PHAXQ9H814 394 aaKnown RBP20.52■□□□□ 0.88
SQLE-201ENST00000265896 GADD45BO75293 160 aaPredicted RBP20.52■□□□□ 0.87
SQLE-201ENST00000265896 GNAI2P04899 355 aa20.52■□□□□ 0.87
SQLE-201ENST00000265896 CYP2E1P05181 493 aaPredicted RBP20.52■□□□□ 0.87
SQLE-201ENST00000265896 EYA1Q99502 592 aa20.52■□□□□ 0.87
SQLE-201ENST00000265896 DLG5Q8TDM6 1919 aa20.51■□□□□ 0.87
SQLE-201ENST00000265896 HMMRO75330 724 aa20.51■□□□□ 0.87
SQLE-201ENST00000265896 ATP7BP35670 1465 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms