RNA–Protein interactions for RNA: ENST00000265299.6

MINDY4-201, Transcript of MINDY lysine 48 deubiquitinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MINDY4, Length 2,733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY4-201ENST00000265299 TBX22Q9Y458 520 aa17.87■□□□□ 0.45
MINDY4-201ENST00000265299 CCDC61Q9Y6R9 512 aa17.87■□□□□ 0.45
MINDY4-201ENST00000265299 SOX12O15370 315 aa17.87■□□□□ 0.45
MINDY4-201ENST00000265299 ZNF500O60304 480 aaPredicted RBP17.87■□□□□ 0.45
MINDY4-201ENST00000265299 ZBTB7CA1YPR0 619 aa17.86■□□□□ 0.45
MINDY4-201ENST00000265299 PRDM10Q9NQV6 1147 aa17.86■□□□□ 0.45
MINDY4-201ENST00000265299 LMBRD1Q9NUN5 540 aa17.86■□□□□ 0.45
MINDY4-201ENST00000265299 TMPOP42166 694 aaKnown RBP17.85■□□□□ 0.45
MINDY4-201ENST00000265299 PDLIM2Q96JY6 352 aa17.85■□□□□ 0.45
MINDY4-201ENST00000265299 TRIM35Q9UPQ4 493 aa17.85■□□□□ 0.45
MINDY4-201ENST00000265299 ATP7BP35670 1465 aa17.85■□□□□ 0.45
MINDY4-201ENST00000265299 HS1BP3Q53T59 392 aa17.85■□□□□ 0.45
MINDY4-201ENST00000265299 ANKLE2Q86XL3 938 aa17.85■□□□□ 0.45
MINDY4-201ENST00000265299 CHAMP1Q96JM3 812 aa17.85■□□□□ 0.45
MINDY4-201ENST00000265299 ZKSCAN5Q9Y2L8 839 aa17.85■□□□□ 0.45
MINDY4-201ENST00000265299 KNDC1Q76NI1 1749 aa17.84■□□□□ 0.45
MINDY4-201ENST00000265299 IPO8O15397 1037 aaKnown RBP17.84■□□□□ 0.45
MINDY4-201ENST00000265299 PRPF40AO75400 957 aaKnown RBP17.84■□□□□ 0.45
MINDY4-201ENST00000265299 KIF16BQ96L93 1317 aa17.84■□□□□ 0.45
MINDY4-201ENST00000265299 USP32Q8NFA0 1604 aa17.84■□□□□ 0.45
MINDY4-201ENST00000265299 EMILIN1Q9Y6C2 1016 aa17.83■□□□□ 0.45
MINDY4-201ENST00000265299 RRS1Q15050 365 aaKnown RBP17.83■□□□□ 0.44
MINDY4-201ENST00000265299 ACEP12821 1306 aa17.82■□□□□ 0.44
MINDY4-201ENST00000265299 CPSF1Q10570 1443 aaKnown RBP17.81■□□□□ 0.44
MINDY4-201ENST00000265299 GPT2Q8TD30 523 aa17.81■□□□□ 0.44
MINDY4-201ENST00000265299 NUCB2P80303 420 aa17.81■□□□□ 0.44
MINDY4-201ENST00000265299 RNF214Q8ND24 703 aa17.81■□□□□ 0.44
MINDY4-201ENST00000265299 SIRT1Q96EB6 747 aa17.81■□□□□ 0.44
MINDY4-201ENST00000265299 CDC45O75419 566 aa17.8■□□□□ 0.44
MINDY4-201ENST00000265299 HSPA2P54652 639 aa17.8■□□□□ 0.44
MINDY4-201ENST00000265299 SYCE3A1L190 88 aa17.8■□□□□ 0.44
MINDY4-201ENST00000265299 DYNC1I1O14576 645 aa17.8■□□□□ 0.44
MINDY4-201ENST00000265299 ZHX1Q9UKY1 873 aaPredicted RBP17.8■□□□□ 0.44
MINDY4-201ENST00000265299 PLEKHG5O94827 1062 aa17.79■□□□□ 0.44
MINDY4-201ENST00000265299 FOXD4L5Q5VV16 416 aaPredicted RBP17.79■□□□□ 0.44
MINDY4-201ENST00000265299 FOXD4L4Q8WXT5 416 aaPredicted RBP17.79■□□□□ 0.44
MINDY4-201ENST00000265299 ZGPATQ8N5A5 531 aaKnown RBP17.79■□□□□ 0.44
MINDY4-201ENST00000265299 PLEKHF1Q96S99 279 aa17.79■□□□□ 0.44
MINDY4-201ENST00000265299 NSD2O96028 1365 aa17.79■□□□□ 0.44
MINDY4-201ENST00000265299 RGPD8O14715 1765 aaPredicted RBP17.79■□□□□ 0.44
MINDY4-201ENST00000265299 CYP2E1P05181 493 aaPredicted RBP17.78■□□□□ 0.44
MINDY4-201ENST00000265299 CSPP1Q1MSJ5 1256 aa17.78■□□□□ 0.44
MINDY4-201ENST00000265299 NUTM2GQ5VZR2 741 aa17.78■□□□□ 0.44
MINDY4-201ENST00000265299 GCC1Q96CN9 775 aa17.78■□□□□ 0.44
MINDY4-201ENST00000265299 POLKQ9UBT6 870 aa17.78■□□□□ 0.44
MINDY4-201ENST00000265299 A0A0U1RQG5 324 aaPredicted RBP17.78■□□□□ 0.44
MINDY4-201ENST00000265299 RABEP1Q15276 862 aa17.78■□□□□ 0.44
MINDY4-201ENST00000265299 NCBP3Q53F19 620 aaKnown RBP17.78■□□□□ 0.44
MINDY4-201ENST00000265299 TMEM63CQ9P1W3 806 aa17.78■□□□□ 0.44
MINDY4-201ENST00000265299 NSFL1CQ9UNZ2 370 aaKnown RBP17.78■□□□□ 0.44
MINDY4-201ENST00000265299 GSPT1P15170 499 aaKnown RBP17.78■□□□□ 0.44
MINDY4-201ENST00000265299 SMAP1Q8IYB5 467 aaPredicted RBP17.78■□□□□ 0.44
MINDY4-201ENST00000265299 JARID2Q92833 1246 aaPredicted RBP17.78■□□□□ 0.44
MINDY4-201ENST00000265299 ZBTB7BO15156 539 aaPredicted RBP17.77■□□□□ 0.44
MINDY4-201ENST00000265299 SASS6Q6UVJ0 657 aa17.77■□□□□ 0.44
MINDY4-201ENST00000265299 SIRT2Q8IXJ6 389 aa17.77■□□□□ 0.44
MINDY4-201ENST00000265299 ADGRB2O60241 1585 aa17.77■□□□□ 0.43
MINDY4-201ENST00000265299 CDC42BPGQ6DT37 1551 aa17.76■□□□□ 0.43
MINDY4-201ENST00000265299 KIF20BQ96Q89 1820 aa17.76■□□□□ 0.43
MINDY4-201ENST00000265299 MPNDQ8N594 471 aa17.76■□□□□ 0.43
MINDY4-201ENST00000265299 CCDC39Q9UFE4 941 aa17.76■□□□□ 0.43
MINDY4-201ENST00000265299 LRSAM1Q6UWE0 723 aa17.75■□□□□ 0.43
MINDY4-201ENST00000265299 MTERF4Q7Z6M4 381 aaKnown RBP17.75■□□□□ 0.43
MINDY4-201ENST00000265299 TSC1Q92574 1164 aa17.75■□□□□ 0.43
MINDY4-201ENST00000265299 EDC4Q6P2E9 1401 aaKnown RBP17.75■□□□□ 0.43
MINDY4-201ENST00000265299 PTMAP06454 111 aaKnown RBP17.75■□□□□ 0.43
MINDY4-201ENST00000265299 SETD1BQ9UPS6 1966 aaKnown RBP17.75■□□□□ 0.43
MINDY4-201ENST00000265299 HMOX1P09601 288 aa17.74■□□□□ 0.43
MINDY4-201ENST00000265299 NGDNQ8NEJ9 315 aaKnown RBP17.74■□□□□ 0.43
MINDY4-201ENST00000265299 ZDHHC9Q9Y397 364 aa17.74■□□□□ 0.43
MINDY4-201ENST00000265299 PTCH1Q13635 1447 aa17.74■□□□□ 0.43
MINDY4-201ENST00000265299 DIP2AQ14689 1571 aa17.74■□□□□ 0.43
MINDY4-201ENST00000265299 XRN1Q8IZH2 1706 aaKnown RBP17.73■□□□□ 0.43
MINDY4-201ENST00000265299 C14orf37Q86TY3 774 aa17.73■□□□□ 0.43
MINDY4-201ENST00000265299 COG3Q96JB2 828 aa17.73■□□□□ 0.43
MINDY4-201ENST00000265299 TTC21BQ7Z4L5 1316 aa17.73■□□□□ 0.43
MINDY4-201ENST00000265299 ELL2O00472 640 aaPredicted RBP17.73■□□□□ 0.43
MINDY4-201ENST00000265299 MCM5P33992 734 aa17.73■□□□□ 0.43
MINDY4-201ENST00000265299 ALDH1L2Q3SY69 923 aa17.73■□□□□ 0.43
MINDY4-201ENST00000265299 DNTTIP2Q5QJE6 756 aaKnown RBP17.73■□□□□ 0.43
MINDY4-201ENST00000265299 ZNF142P52746 1687 aaPredicted RBP17.73■□□□□ 0.43
MINDY4-201ENST00000265299 IL16Q14005 1332 aa17.73■□□□□ 0.43
MINDY4-201ENST00000265299 COL3A1P02461 1466 aaPredicted RBP17.72■□□□□ 0.43
MINDY4-201ENST00000265299 USP26Q9BXU7 913 aa17.71■□□□□ 0.43
MINDY4-201ENST00000265299 ANKRD26Q9UPS8 1709 aa17.71■□□□□ 0.43
MINDY4-201ENST00000265299 DIAPH1O60610 1272 aaKnown RBP17.71■□□□□ 0.43
MINDY4-201ENST00000265299 PLEKHM2Q8IWE5 1019 aa17.71■□□□□ 0.43
MINDY4-201ENST00000265299 C16orf71Q8IYS4 520 aaPredicted RBP17.71■□□□□ 0.43
MINDY4-201ENST00000265299 MAP2P11137 1827 aaKnown RBP17.71■□□□□ 0.43
MINDY4-201ENST00000265299 NPHP4O75161 1426 aaPredicted RBP17.7■□□□□ 0.42
MINDY4-201ENST00000265299 PLEKHG3A1L390 1219 aa17.7■□□□□ 0.42
MINDY4-201ENST00000265299 CCDC94Q9BW85 323 aaPredicted RBP17.7■□□□□ 0.42
MINDY4-201ENST00000265299 ITSN1Q15811 1721 aa17.7■□□□□ 0.42
MINDY4-201ENST00000265299 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.7■□□□□ 0.42
MINDY4-201ENST00000265299 MON2Q7Z3U7 1717 aa17.69■□□□□ 0.42
MINDY4-201ENST00000265299 USP6P35125 1406 aa17.69■□□□□ 0.42
MINDY4-201ENST00000265299 THUMPD2Q9BTF0 503 aaKnown RBP17.69■□□□□ 0.42
MINDY4-201ENST00000265299 CWC22Q9HCG8 908 aaKnown RBP17.69■□□□□ 0.42
MINDY4-201ENST00000265299 KIAA2012Q0VF49 1180 aa17.69■□□□□ 0.42
MINDY4-201ENST00000265299 TSPYL6Q8N831 410 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms