RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 LRRFIP2Q9Y608 721 aaKnown RBP21.22■□□□□ 0.99
COL5A3-201ENST00000264828 CUL7Q14999 1698 aa21.21■□□□□ 0.99
COL5A3-201ENST00000264828 WWC2Q6AWC2 1192 aa21.21■□□□□ 0.99
COL5A3-201ENST00000264828 PIBF1Q8WXW3 757 aa21.21■□□□□ 0.99
COL5A3-201ENST00000264828 ZRSR2Q15696 482 aaKnown RBP21.21■□□□□ 0.99
COL5A3-201ENST00000264828 SPINK5Q9NQ38 1064 aaPredicted RBP21.21■□□□□ 0.99
COL5A3-201ENST00000264828 SYCE3A1L190 88 aa21.2■□□□□ 0.98
COL5A3-201ENST00000264828 MCM4P33991 863 aa21.2■□□□□ 0.98
COL5A3-201ENST00000264828 LUC7LQ9NQ29 371 aaKnown RBP21.2■□□□□ 0.98
COL5A3-201ENST00000264828 BLOC1S2Q6QNY1 142 aa21.19■□□□□ 0.98
COL5A3-201ENST00000264828 STRN4Q9NRL3 753 aa21.19■□□□□ 0.98
COL5A3-201ENST00000264828 UPF3BQ9BZI7 483 aaKnown RBP21.19■□□□□ 0.98
COL5A3-201ENST00000264828 ATF7IPQ6VMQ6 1270 aa21.19■□□□□ 0.98
COL5A3-201ENST00000264828 IL1RAPL2Q9NP60 686 aa21.19■□□□□ 0.98
COL5A3-201ENST00000264828 SSBP05455 408 aaKnown RBP eCLIP21.19■□□□□ 0.98
COL5A3-201ENST00000264828 GNL3LQ9NVN8 582 aaKnown RBP21.19■□□□□ 0.98
COL5A3-201ENST00000264828 ESPNB1AK53 854 aa21.18■□□□□ 0.98
COL5A3-201ENST00000264828 NACAP1Q9BZK3 213 aa21.18■□□□□ 0.98
COL5A3-201ENST00000264828 SRCIN1Q9C0H9 1055 aa21.18■□□□□ 0.98
COL5A3-201ENST00000264828 KIF14Q15058 1648 aa21.18■□□□□ 0.98
COL5A3-201ENST00000264828 CEP57L1Q8IYX8 460 aa21.18■□□□□ 0.98
COL5A3-201ENST00000264828 THEMISQ8N1K5 641 aaPredicted RBP21.18■□□□□ 0.98
COL5A3-201ENST00000264828 DDX11Q96FC9 970 aa21.17■□□□□ 0.98
COL5A3-201ENST00000264828 SLC12A5Q9H2X9 1139 aa21.17■□□□□ 0.98
COL5A3-201ENST00000264828 EPRSP07814 1512 aaKnown RBP21.17■□□□□ 0.98
COL5A3-201ENST00000264828 DHX8Q14562 1220 aaKnown RBP21.17■□□□□ 0.98
COL5A3-201ENST00000264828 RAPGEF3O95398 923 aa21.17■□□□□ 0.98
COL5A3-201ENST00000264828 SOGA3Q5TF21 947 aa21.17■□□□□ 0.98
COL5A3-201ENST00000264828 NOL7Q9UMY1 257 aaKnown RBP21.17■□□□□ 0.98
COL5A3-201ENST00000264828 RTEL1-TNFRSF6BF6WH68 1400 aa21.17■□□□□ 0.98
COL5A3-201ENST00000264828 GOLGA6L7A0A1B0GV03 622 aa21.17■□□□□ 0.98
COL5A3-201ENST00000264828 LAMC3Q9Y6N6 1575 aa21.16■□□□□ 0.98
COL5A3-201ENST00000264828 PRDM10Q9NQV6 1147 aa21.16■□□□□ 0.98
COL5A3-201ENST00000264828 CABP1Q9NZU7 370 aa21.16■□□□□ 0.98
COL5A3-201ENST00000264828 TAF3Q5VWG9 929 aa21.15■□□□□ 0.98
COL5A3-201ENST00000264828 KIAA1328Q86T90 577 aa21.15■□□□□ 0.98
COL5A3-201ENST00000264828 ARHGEF11O15085 1522 aa21.15■□□□□ 0.98
COL5A3-201ENST00000264828 SRGAP3O43295 1099 aa21.15■□□□□ 0.98
COL5A3-201ENST00000264828 CASTP20810 708 aaKnown RBP21.15■□□□□ 0.98
COL5A3-201ENST00000264828 CABP4P57796 275 aa21.15■□□□□ 0.98
COL5A3-201ENST00000264828 NUTM1Q86Y26 1132 aa21.15■□□□□ 0.98
COL5A3-201ENST00000264828 PDCL2Q8N4E4 241 aa21.15■□□□□ 0.98
COL5A3-201ENST00000264828 ANKRD18AQ8IVF6 992 aa21.14■□□□□ 0.98
COL5A3-201ENST00000264828 CFAP45Q9UL16 551 aa21.14■□□□□ 0.98
COL5A3-201ENST00000264828 TXLNBQ8N3L3 684 aa21.14■□□□□ 0.97
COL5A3-201ENST00000264828 EPB41L2O43491 1005 aaKnown RBP21.13■□□□□ 0.97
COL5A3-201ENST00000264828 TATP17735 454 aaPredicted RBP21.13■□□□□ 0.97
COL5A3-201ENST00000264828 IQCEQ6IPM2 695 aa21.13■□□□□ 0.97
COL5A3-201ENST00000264828 PTPN23Q9H3S7 1636 aa21.13■□□□□ 0.97
COL5A3-201ENST00000264828 TDO2P48775 406 aa21.12■□□□□ 0.97
COL5A3-201ENST00000264828 CAMSAP2Q08AD1 1489 aa21.12■□□□□ 0.97
COL5A3-201ENST00000264828 KIAA0586Q9BVV6 1533 aa21.12■□□□□ 0.97
COL5A3-201ENST00000264828 CFAP100Q494V2 611 aa21.12■□□□□ 0.97
COL5A3-201ENST00000264828 PHF23Q9BUL5 403 aaPredicted RBP21.12■□□□□ 0.97
COL5A3-201ENST00000264828 EIF5P55010 431 aaKnown RBP21.12■□□□□ 0.97
COL5A3-201ENST00000264828 CCDC57Q2TAC2 916 aa21.12■□□□□ 0.97
COL5A3-201ENST00000264828 NBPF8Q3BBV2 869 aa21.12■□□□□ 0.97
COL5A3-201ENST00000264828 CCDC184Q52MB2 194 aa21.12■□□□□ 0.97
COL5A3-201ENST00000264828 ZSCAN31Q96LW9 406 aaPredicted RBP21.12■□□□□ 0.97
COL5A3-201ENST00000264828 MAP3K11Q16584 847 aa21.12■□□□□ 0.97
COL5A3-201ENST00000264828 WDR63Q8IWG1 891 aa21.12■□□□□ 0.97
COL5A3-201ENST00000264828 DDX54Q8TDD1 881 aaKnown RBP21.11■□□□□ 0.97
COL5A3-201ENST00000264828 POGZQ7Z3K3 1410 aa21.11■□□□□ 0.97
COL5A3-201ENST00000264828 SMTNL1A8MU46 457 aa21.11■□□□□ 0.97
COL5A3-201ENST00000264828 CDKL5O76039 1030 aa21.11■□□□□ 0.97
COL5A3-201ENST00000264828 ABCA10Q8WWZ4 1543 aa21.11■□□□□ 0.97
COL5A3-201ENST00000264828 CBX1P83916 185 aa21.11■□□□□ 0.97
COL5A3-201ENST00000264828 FERMT3Q86UX7 667 aa21.11■□□□□ 0.97
COL5A3-201ENST00000264828 PPP6R1Q9UPN7 881 aa21.11■□□□□ 0.97
COL5A3-201ENST00000264828 ZNF530Q6P9A1 599 aaPredicted RBP21.1■□□□□ 0.97
COL5A3-201ENST00000264828 CCDC83Q8IWF9 413 aa21.1■□□□□ 0.97
COL5A3-201ENST00000264828 SKAP1Q86WV1 359 aa21.1■□□□□ 0.97
COL5A3-201ENST00000264828 UBAC1Q9BSL1 405 aa21.1■□□□□ 0.97
COL5A3-201ENST00000264828 RBM5P52756 815 aaKnown RBP eCLIP21.1■□□□□ 0.97
COL5A3-201ENST00000264828 ARHGAP29Q52LW3 1261 aa21.1■□□□□ 0.97
COL5A3-201ENST00000264828 ZSCAN25Q6NSZ9 544 aa21.1■□□□□ 0.97
COL5A3-201ENST00000264828 CCDC85AQ96PX6 553 aaPredicted RBP21.1■□□□□ 0.97
COL5A3-201ENST00000264828 PNISRQ8TF01 805 aaKnown RBP21.09■□□□□ 0.97
COL5A3-201ENST00000264828 UBXN4Q92575 508 aa21.09■□□□□ 0.97
COL5A3-201ENST00000264828 MPHOSPH8Q99549 860 aa21.09■□□□□ 0.97
COL5A3-201ENST00000264828 ZNF692Q9BU19 519 aaPredicted RBP21.09■□□□□ 0.97
COL5A3-201ENST00000264828 RRP9O43818 475 aaKnown RBP21.09■□□□□ 0.97
COL5A3-201ENST00000264828 IBSPP21815 317 aaPredicted RBP21.09■□□□□ 0.97
COL5A3-201ENST00000264828 TMX1Q9H3N1 280 aa21.09■□□□□ 0.97
COL5A3-201ENST00000264828 SSR1P43307 286 aaKnown RBP21.09■□□□□ 0.97
COL5A3-201ENST00000264828 NUTM2BA6NNL0 878 aaPredicted RBP21.09■□□□□ 0.97
COL5A3-201ENST00000264828 NUTM2EB1AL46 878 aaPredicted RBP21.09■□□□□ 0.97
COL5A3-201ENST00000264828 SMARCA5O60264 1052 aaPredicted RBP21.09■□□□□ 0.97
COL5A3-201ENST00000264828 MATR3P43243 847 aaKnown RBP eCLIP21.09■□□□□ 0.97
COL5A3-201ENST00000264828 NUTM2AQ8IVF1 878 aaPredicted RBP21.09■□□□□ 0.97
COL5A3-201ENST00000264828 TMEM57Q8N5G2 664 aa21.09■□□□□ 0.97
COL5A3-201ENST00000264828 CIZ1Q9ULV3 898 aaPredicted RBP21.09■□□□□ 0.97
COL5A3-201ENST00000264828 SLC52A1Q9NWF4 448 aa21.08■□□□□ 0.97
COL5A3-201ENST00000264828 MAGI1Q96QZ7 1491 aaPredicted RBP21.08■□□□□ 0.97
COL5A3-201ENST00000264828 GBP2P32456 591 aaPredicted RBP21.08■□□□□ 0.97
COL5A3-201ENST00000264828 TAF4BQ92750 862 aa21.08■□□□□ 0.97
COL5A3-201ENST00000264828 CCDC141Q6ZP82 1450 aa21.08■□□□□ 0.97
COL5A3-201ENST00000264828 RRS1Q15050 365 aaKnown RBP21.08■□□□□ 0.97
COL5A3-201ENST00000264828 CCDC148Q8NFR7 591 aa21.08■□□□□ 0.96
COL5A3-201ENST00000264828 RPGRIP1LQ68CZ1 1315 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms