RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 GTF3C6Q969F1 213 aa19.43■□□□□ 0.7
GPC1-201ENST00000264039 NUP62CLQ9H1M0 184 aa19.43■□□□□ 0.7
GPC1-201ENST00000264039 TRIM35Q9UPQ4 493 aa19.43■□□□□ 0.7
GPC1-201ENST00000264039 POLR3AO14802 1390 aaPredicted RBP19.43■□□□□ 0.7
GPC1-201ENST00000264039 FAM173BQ6P4H8 233 aa19.43■□□□□ 0.7
GPC1-201ENST00000264039 KRT222Q8N1A0 295 aa19.43■□□□□ 0.7
GPC1-201ENST00000264039 CPA1P15085 419 aa19.43■□□□□ 0.7
GPC1-201ENST00000264039 FKBP5Q13451 457 aaPredicted RBP19.42■□□□□ 0.7
GPC1-201ENST00000264039 PTPN14Q15678 1187 aa19.42■□□□□ 0.7
GPC1-201ENST00000264039 MEIS3Q99687 375 aa19.42■□□□□ 0.7
GPC1-201ENST00000264039 MRC2Q9UBG0 1479 aa19.42■□□□□ 0.7
GPC1-201ENST00000264039 STK31Q9BXU1 1019 aa19.42■□□□□ 0.7
GPC1-201ENST00000264039 CUL7Q14999 1698 aa19.42■□□□□ 0.7
GPC1-201ENST00000264039 CTTNBP2Q8WZ74 1663 aa19.42■□□□□ 0.7
GPC1-201ENST00000264039 NUP153P49790 1475 aaKnown RBP19.42■□□□□ 0.7
GPC1-201ENST00000264039 TEX35Q5T0J7 233 aa19.42■□□□□ 0.7
GPC1-201ENST00000264039 NUTM1Q86Y26 1132 aa19.42■□□□□ 0.7
GPC1-201ENST00000264039 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.42■□□□□ 0.7
GPC1-201ENST00000264039 SCAPERQ9BY12 1400 aa19.42■□□□□ 0.7
GPC1-201ENST00000264039 SRCIN1Q9C0H9 1055 aa19.41■□□□□ 0.7
GPC1-201ENST00000264039 CLIP2Q9UDT6 1046 aa19.41■□□□□ 0.7
GPC1-201ENST00000264039 MAP3K11Q16584 847 aa19.41■□□□□ 0.7
GPC1-201ENST00000264039 CWC27Q6UX04 472 aaKnown RBP19.41■□□□□ 0.7
GPC1-201ENST00000264039 C8orf58Q8NAV2 365 aa19.41■□□□□ 0.7
GPC1-201ENST00000264039 UVSSAQ2YD98 709 aa19.41■□□□□ 0.7
GPC1-201ENST00000264039 ALDH1L2Q3SY69 923 aa19.41■□□□□ 0.7
GPC1-201ENST00000264039 MNS1Q8NEH6 495 aa19.41■□□□□ 0.7
GPC1-201ENST00000264039 SCAF11Q99590 1463 aaKnown RBP19.41■□□□□ 0.7
GPC1-201ENST00000264039 IQGAP2Q13576 1575 aa19.4■□□□□ 0.7
GPC1-201ENST00000264039 H3BQV1 296 aa19.4■□□□□ 0.7
GPC1-201ENST00000264039 IFFO2Q5TF58 517 aa19.4■□□□□ 0.7
GPC1-201ENST00000264039 WDR7Q9Y4E6 1490 aa19.4■□□□□ 0.7
GPC1-201ENST00000264039 IBTKQ9P2D0 1353 aaPredicted RBP19.4■□□□□ 0.7
GPC1-201ENST00000264039 STX6O43752 255 aa19.4■□□□□ 0.7
GPC1-201ENST00000264039 LARP1BQ659C4 914 aaKnown RBP19.4■□□□□ 0.7
GPC1-201ENST00000264039 PALD1Q9ULE6 856 aa19.4■□□□□ 0.7
GPC1-201ENST00000264039 CCDC9Q9Y3X0 531 aaKnown RBP19.4■□□□□ 0.7
GPC1-201ENST00000264039 PPFIA3O75145 1194 aa19.39■□□□□ 0.7
GPC1-201ENST00000264039 CEP135Q66GS9 1140 aa19.39■□□□□ 0.69
GPC1-201ENST00000264039 SIRT2Q8IXJ6 389 aa19.39■□□□□ 0.69
GPC1-201ENST00000264039 UBE2HP62256 183 aa19.39■□□□□ 0.69
GPC1-201ENST00000264039 MBIPQ9NS73 344 aa19.39■□□□□ 0.69
GPC1-201ENST00000264039 SPG7Q9UQ90 795 aa19.39■□□□□ 0.69
GPC1-201ENST00000264039 FEZ1Q99689 392 aa19.38■□□□□ 0.69
GPC1-201ENST00000264039 CALCOCO1Q9P1Z2 691 aa19.38■□□□□ 0.69
GPC1-201ENST00000264039 ZNF608Q9ULD9 1512 aaPredicted RBP19.38■□□□□ 0.69
GPC1-201ENST00000264039 CASTP20810 708 aaKnown RBP19.38■□□□□ 0.69
GPC1-201ENST00000264039 VAMP4O75379 141 aa19.38■□□□□ 0.69
GPC1-201ENST00000264039 NECAB1Q8N987 351 aa19.38■□□□□ 0.69
GPC1-201ENST00000264039 TCEANC2Q96MN5 208 aa19.38■□□□□ 0.69
GPC1-201ENST00000264039 NOL10Q9BSC4 688 aaKnown RBP19.38■□□□□ 0.69
GPC1-201ENST00000264039 FAM135AQ9P2D6 1515 aa19.37■□□□□ 0.69
GPC1-201ENST00000264039 SURF6O75683 361 aaKnown RBP19.37■□□□□ 0.69
GPC1-201ENST00000264039 NRBP1Q9UHY1 535 aa19.37■□□□□ 0.69
GPC1-201ENST00000264039 BRD1O95696 1058 aa19.37■□□□□ 0.69
GPC1-201ENST00000264039 PHACTR3Q96KR7 559 aa19.37■□□□□ 0.69
GPC1-201ENST00000264039 ANO6Q4KMQ2 910 aa19.37■□□□□ 0.69
GPC1-201ENST00000264039 MRPL50Q8N5N7 158 aaKnown RBP19.37■□□□□ 0.69
GPC1-201ENST00000264039 LRRCC1Q9C099 1032 aa19.36■□□□□ 0.69
GPC1-201ENST00000264039 ZNF165P49910 485 aa19.36■□□□□ 0.69
GPC1-201ENST00000264039 KRT85P78386 507 aa19.36■□□□□ 0.69
GPC1-201ENST00000264039 RPAP2Q8IXW5 612 aaPredicted RBP19.36■□□□□ 0.69
GPC1-201ENST00000264039 JAKMIP1Q96N16 626 aaKnown RBP19.36■□□□□ 0.69
GPC1-201ENST00000264039 DCTPP1Q9H773 170 aa19.36■□□□□ 0.69
GPC1-201ENST00000264039 SMC2O95347 1197 aa19.35■□□□□ 0.69
GPC1-201ENST00000264039 HAP1P54257 671 aaPredicted RBP19.35■□□□□ 0.69
GPC1-201ENST00000264039 ELF2Q15723 593 aa19.35■□□□□ 0.69
GPC1-201ENST00000264039 PDE1AP54750 535 aa19.35■□□□□ 0.69
GPC1-201ENST00000264039 ZSCAN22P10073 491 aaPredicted RBP19.35■□□□□ 0.69
GPC1-201ENST00000264039 LMOD3Q0VAK6 560 aa19.35■□□□□ 0.69
GPC1-201ENST00000264039 DNAJC25Q9H1X3 360 aa19.35■□□□□ 0.69
GPC1-201ENST00000264039 MCM10Q7L590 875 aa19.34■□□□□ 0.69
GPC1-201ENST00000264039 PPIP5K1Q6PFW1 1433 aa19.34■□□□□ 0.69
GPC1-201ENST00000264039 SYT1P21579 422 aa19.34■□□□□ 0.69
GPC1-201ENST00000264039 GJB2P29033 226 aa19.34■□□□□ 0.69
GPC1-201ENST00000264039 SPATA32Q96LK8 384 aa19.34■□□□□ 0.69
GPC1-201ENST00000264039 DACT1Q9NYF0 836 aa19.34■□□□□ 0.69
GPC1-201ENST00000264039 CABP1Q9NZU7 370 aa19.34■□□□□ 0.69
GPC1-201ENST00000264039 ABCC11Q96J66 1382 aa19.34■□□□□ 0.69
GPC1-201ENST00000264039 RRS1Q15050 365 aaKnown RBP19.33■□□□□ 0.69
GPC1-201ENST00000264039 GPS2Q13227 327 aa19.33■□□□□ 0.68
GPC1-201ENST00000264039 KIAA1524Q8TCG1 905 aa19.33■□□□□ 0.68
GPC1-201ENST00000264039 ZKSCAN1P17029 563 aaPredicted RBP19.33■□□□□ 0.68
GPC1-201ENST00000264039 PLPPR3Q6T4P5 718 aa19.32■□□□□ 0.68
GPC1-201ENST00000264039 ESYT1Q9BSJ8 1104 aa19.32■□□□□ 0.68
GPC1-201ENST00000264039 ZNF215Q9UL58 517 aaPredicted RBP19.32■□□□□ 0.68
GPC1-201ENST00000264039 NFE2L2Q16236 605 aa19.32■□□□□ 0.68
GPC1-201ENST00000264039 C10orf67Q8IYJ2 551 aa19.32■□□□□ 0.68
GPC1-201ENST00000264039 KIF18AQ8NI77 898 aa19.32■□□□□ 0.68
GPC1-201ENST00000264039 ZMYM3Q14202 1370 aa19.32■□□□□ 0.68
GPC1-201ENST00000264039 SF3A1Q15459 793 aaKnown RBP19.32■□□□□ 0.68
GPC1-201ENST00000264039 SDF4Q9BRK5 362 aa19.32■□□□□ 0.68
GPC1-201ENST00000264039 ARGLU1Q9NWB6 273 aaPredicted RBP19.32■□□□□ 0.68
GPC1-201ENST00000264039 SKILP12757 684 aa19.31■□□□□ 0.68
GPC1-201ENST00000264039 FAM200AQ8TCP9 573 aa19.31■□□□□ 0.68
GPC1-201ENST00000264039 ST7Q9NRC1 585 aa19.31■□□□□ 0.68
GPC1-201ENST00000264039 EMILIN1Q9Y6C2 1016 aa19.31■□□□□ 0.68
GPC1-201ENST00000264039 EIF2S2P20042 333 aaKnown RBP19.31■□□□□ 0.68
GPC1-201ENST00000264039 DDX11Q96FC9 970 aa19.31■□□□□ 0.68
GPC1-201ENST00000264039 TOMM22Q9NS69 142 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms