RNA–Protein interactions for RNA: ENST00000263956.7

GTF3C3-201, Transcript of general transcription factor IIIC subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C3, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-201ENST00000263956 INSRP06213 1382 aa10.38□□□□□ -0.75
GTF3C3-201ENST00000263956 EIF5BO60841 1220 aaKnown RBP10.38□□□□□ -0.75
GTF3C3-201ENST00000263956 MYO3AQ8NEV4 1616 aa10.37□□□□□ -0.75
GTF3C3-201ENST00000263956 NBPF6Q5VWK0 638 aa10.37□□□□□ -0.75
GTF3C3-201ENST00000263956 NBPF4Q96M43 638 aa10.37□□□□□ -0.75
GTF3C3-201ENST00000263956 IL16Q14005 1332 aa10.37□□□□□ -0.75
GTF3C3-201ENST00000263956 FAM83GA6ND36 823 aa10.37□□□□□ -0.75
GTF3C3-201ENST00000263956 RSPH6AQ9H0K4 717 aa10.37□□□□□ -0.75
GTF3C3-201ENST00000263956 PCDH11XQ9BZA7 1347 aa10.37□□□□□ -0.75
GTF3C3-201ENST00000263956 PCDH11YQ9BZA8 1340 aa10.37□□□□□ -0.75
GTF3C3-201ENST00000263956 KIAA1210Q9ULL0 1709 aa10.37□□□□□ -0.75
GTF3C3-201ENST00000263956 DCAF5Q96JK2 942 aa10.36□□□□□ -0.75
GTF3C3-201ENST00000263956 TEX13AQ9BXU3 409 aaPredicted RBP10.36□□□□□ -0.75
GTF3C3-201ENST00000263956 ADGRB1O14514 1584 aa10.36□□□□□ -0.75
GTF3C3-201ENST00000263956 MYL6BP14649 208 aa10.36□□□□□ -0.75
GTF3C3-201ENST00000263956 HSP90B1P14625 803 aaKnown RBP10.36□□□□□ -0.75
GTF3C3-201ENST00000263956 GORABQ5T7V8 394 aa10.36□□□□□ -0.75
GTF3C3-201ENST00000263956 PHACTR3Q96KR7 559 aa10.36□□□□□ -0.75
GTF3C3-201ENST00000263956 KIF24Q5T7B8 1368 aa10.35□□□□□ -0.75
GTF3C3-201ENST00000263956 PPLO60437 1756 aa10.35□□□□□ -0.75
GTF3C3-201ENST00000263956 QRICH2Q9H0J4 1663 aa10.35□□□□□ -0.75
GTF3C3-201ENST00000263956 CCDC27Q2M243 656 aa10.35□□□□□ -0.75
GTF3C3-201ENST00000263956 SMARCC1Q92922 1105 aaPredicted RBP10.35□□□□□ -0.75
GTF3C3-201ENST00000263956 CRBNQ96SW2 442 aa10.35□□□□□ -0.75
GTF3C3-201ENST00000263956 RTL1A6NKG5 1358 aa10.35□□□□□ -0.75
GTF3C3-201ENST00000263956 TNS3Q68CZ2 1445 aa10.35□□□□□ -0.75
GTF3C3-201ENST00000263956 ANP32AP39687 249 aaKnown RBP10.35□□□□□ -0.75
GTF3C3-201ENST00000263956 FAM98CQ17RN3 349 aaKnown RBP10.35□□□□□ -0.75
GTF3C3-201ENST00000263956 MAP3K5Q99683 1374 aa10.34□□□□□ -0.75
GTF3C3-201ENST00000263956 FANCIQ9NVI1 1328 aa10.34□□□□□ -0.75
GTF3C3-201ENST00000263956 ACSBG1Q96GR2 724 aa10.34□□□□□ -0.75
GTF3C3-201ENST00000263956 TRPC5Q9UL62 973 aaPredicted RBP10.34□□□□□ -0.75
GTF3C3-201ENST00000263956 DCCP43146 1447 aa10.34□□□□□ -0.75
GTF3C3-201ENST00000263956 GNAI3P08754 354 aa10.34□□□□□ -0.75
GTF3C3-201ENST00000263956 LARP1Q6PKG0 1096 aaKnown RBP10.34□□□□□ -0.75
GTF3C3-201ENST00000263956 CARD10Q9BWT7 1032 aa10.33□□□□□ -0.76
GTF3C3-201ENST00000263956 NOB1Q9ULX3 412 aaKnown RBP10.33□□□□□ -0.76
GTF3C3-201ENST00000263956 UBTFL1P0CB47 393 aaPredicted RBP10.33□□□□□ -0.76
GTF3C3-201ENST00000263956 EXOC6Q8TAG9 804 aa10.33□□□□□ -0.76
GTF3C3-201ENST00000263956 SNRPA1P09661 255 aaKnown RBP10.33□□□□□ -0.76
GTF3C3-201ENST00000263956 AAMPQ13685 434 aa10.33□□□□□ -0.76
GTF3C3-201ENST00000263956 PANK1Q8TE04 598 aa10.33□□□□□ -0.76
GTF3C3-201ENST00000263956 RNMTO43148 476 aaKnown RBP10.33□□□□□ -0.76
GTF3C3-201ENST00000263956 GPATCH3Q96I76 525 aa10.33□□□□□ -0.76
GTF3C3-201ENST00000263956 MBIPQ9NS73 344 aa10.33□□□□□ -0.76
GTF3C3-201ENST00000263956 CDC42BPGQ6DT37 1551 aa10.32□□□□□ -0.76
GTF3C3-201ENST00000263956 JCADQ9P266 1359 aa10.32□□□□□ -0.76
GTF3C3-201ENST00000263956 BCAR3O75815 825 aa10.32□□□□□ -0.76
GTF3C3-201ENST00000263956 CCT4P50991 539 aaKnown RBP10.32□□□□□ -0.76
GTF3C3-201ENST00000263956 WDR17Q8IZU2 1322 aa10.32□□□□□ -0.76
GTF3C3-201ENST00000263956 G3V3G9 751 aa10.32□□□□□ -0.76
GTF3C3-201ENST00000263956 PDE3AQ14432 1141 aa10.32□□□□□ -0.76
GTF3C3-201ENST00000263956 DCAF8Q5TAQ9 597 aa10.32□□□□□ -0.76
GTF3C3-201ENST00000263956 ZNF772Q68DY9 489 aaPredicted RBP10.32□□□□□ -0.76
GTF3C3-201ENST00000263956 SRCIN1Q9C0H9 1055 aa10.32□□□□□ -0.76
GTF3C3-201ENST00000263956 QTRT2Q9H974 415 aaKnown RBP10.32□□□□□ -0.76
GTF3C3-201ENST00000263956 DBF4Q9UBU7 674 aaPredicted RBP10.32□□□□□ -0.76
GTF3C3-201ENST00000263956 UBR1Q8IWV7 1749 aa10.32□□□□□ -0.76
GTF3C3-201ENST00000263956 USP31Q70CQ4 1352 aa10.32□□□□□ -0.76
GTF3C3-201ENST00000263956 CPSF1Q10570 1443 aaKnown RBP10.32□□□□□ -0.76
GTF3C3-201ENST00000263956 ALDH1L2Q3SY69 923 aa10.32□□□□□ -0.76
GTF3C3-201ENST00000263956 NFATC2IPQ8NCF5 419 aa10.32□□□□□ -0.76
GTF3C3-201ENST00000263956 ATF7IPQ6VMQ6 1270 aa10.31□□□□□ -0.76
GTF3C3-201ENST00000263956 ADAMTSL3P82987 1691 aa10.31□□□□□ -0.76
GTF3C3-201ENST00000263956 FAM177BA6PVY3 158 aa10.31□□□□□ -0.76
GTF3C3-201ENST00000263956 ERBB3P21860 1342 aa10.31□□□□□ -0.76
GTF3C3-201ENST00000263956 CPS1P31327 1500 aa10.31□□□□□ -0.76
GTF3C3-201ENST00000263956 MED14O60244 1454 aa10.31□□□□□ -0.76
GTF3C3-201ENST00000263956 SIGLEC1Q9BZZ2 1709 aa10.31□□□□□ -0.76
GTF3C3-201ENST00000263956 SLC39A6Q13433 755 aa10.3□□□□□ -0.76
GTF3C3-201ENST00000263956 HYPKQ9NX55 129 aa10.3□□□□□ -0.76
GTF3C3-201ENST00000263956 HSP90AA1P07900 732 aaKnown RBP10.3□□□□□ -0.76
GTF3C3-201ENST00000263956 UNC5CLQ8IV45 518 aa10.3□□□□□ -0.76
GTF3C3-201ENST00000263956 ZNF652Q9Y2D9 606 aa10.3□□□□□ -0.76
GTF3C3-201ENST00000263956 HSPA1LP34931 641 aa10.3□□□□□ -0.76
GTF3C3-201ENST00000263956 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.3□□□□□ -0.764e-7■■■□□ 15.5
GTF3C3-201ENST00000263956 ZPR1O75312 459 aa10.29□□□□□ -0.76
GTF3C3-201ENST00000263956 G3BP1Q13283 466 aaKnown RBP eCLIP10.29□□□□□ -0.76
GTF3C3-201ENST00000263956 HSP90AB4PQ58FF6 505 aa10.29□□□□□ -0.76
GTF3C3-201ENST00000263956 SSH1Q8WYL5 1049 aa10.29□□□□□ -0.76
GTF3C3-201ENST00000263956 AK7Q96M32 723 aa10.29□□□□□ -0.76
GTF3C3-201ENST00000263956 IGSF1Q8N6C5 1336 aa10.29□□□□□ -0.76
GTF3C3-201ENST00000263956 FRAT2O75474 233 aaPredicted RBP10.29□□□□□ -0.76
GTF3C3-201ENST00000263956 RARSP54136 660 aaKnown RBP10.29□□□□□ -0.76
GTF3C3-201ENST00000263956 SOS2Q07890 1332 aaPredicted RBP10.29□□□□□ -0.76
GTF3C3-201ENST00000263956 IQGAP1P46940 1657 aa10.28□□□□□ -0.76
GTF3C3-201ENST00000263956 KLHL34Q8N239 644 aa10.28□□□□□ -0.76
GTF3C3-201ENST00000263956 BCL11BQ9C0K0 894 aaPredicted RBP10.28□□□□□ -0.76
GTF3C3-201ENST00000263956 BABAM1Q9NWV8 329 aa10.28□□□□□ -0.76
GTF3C3-201ENST00000263956 SPATA31A6Q5VVP1 1343 aa10.28□□□□□ -0.76
GTF3C3-201ENST00000263956 ATP6V1AP38606 617 aa10.28□□□□□ -0.76
GTF3C3-201ENST00000263956 MST1RQ04912 1400 aa10.28□□□□□ -0.76
GTF3C3-201ENST00000263956 KCNJ4P48050 445 aa10.27□□□□□ -0.76
GTF3C3-201ENST00000263956 HSP90AB3PQ58FF7 597 aa10.27□□□□□ -0.76
GTF3C3-201ENST00000263956 BLMP54132 1417 aaPredicted RBP10.27□□□□□ -0.76
GTF3C3-201ENST00000263956 GNAI2P04899 355 aa10.27□□□□□ -0.77
GTF3C3-201ENST00000263956 NCBP3Q53F19 620 aaKnown RBP10.27□□□□□ -0.77
GTF3C3-201ENST00000263956 ANKRD45Q5TZF3 282 aa10.27□□□□□ -0.77
GTF3C3-201ENST00000263956 CENPQQ7L2Z9 268 aaPredicted RBP10.27□□□□□ -0.77
GTF3C3-201ENST00000263956 CDK12Q9NYV4 1490 aaPredicted RBP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms