RNA–Protein interactions for RNA: ENST00000262640.11

VAMP7-201, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene VAMP7, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-201ENST00000262640 DCTN1Q14203 1278 aa16.86■□□□□ 0.29
VAMP7-201ENST00000262640 MAP3K5Q99683 1374 aa16.86■□□□□ 0.29
VAMP7-201ENST00000262640 AMOTQ4VCS5 1084 aa16.86■□□□□ 0.29
VAMP7-201ENST00000262640 PLEKHO1Q53GL0 409 aaPredicted RBP16.86■□□□□ 0.29
VAMP7-201ENST00000262640 LAS1LQ9Y4W2 734 aaKnown RBP16.86■□□□□ 0.29
VAMP7-201ENST00000262640 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.85■□□□□ 0.29
VAMP7-201ENST00000262640 PLEKHG2Q9H7P9 1386 aa16.85■□□□□ 0.29
VAMP7-201ENST00000262640 EXOSC9Q06265 439 aaKnown RBP16.85■□□□□ 0.29
VAMP7-201ENST00000262640 MCM10Q7L590 875 aa16.85■□□□□ 0.29
VAMP7-201ENST00000262640 CRB1P82279 1406 aa16.83■□□□□ 0.29
VAMP7-201ENST00000262640 WDR17Q8IZU2 1322 aa16.83■□□□□ 0.28
VAMP7-201ENST00000262640 COL5A2P05997 1499 aaPredicted RBP16.83■□□□□ 0.28
VAMP7-201ENST00000262640 RARSP54136 660 aaKnown RBP16.82■□□□□ 0.28
VAMP7-201ENST00000262640 RAPGEF4Q8WZA2 1011 aa16.82■□□□□ 0.28
VAMP7-201ENST00000262640 MBIPQ9NS73 344 aa16.82■□□□□ 0.28
VAMP7-201ENST00000262640 CERKQ8TCT0 537 aa16.82■□□□□ 0.28
VAMP7-201ENST00000262640 LRRC37A3O60309 1634 aa16.81■□□□□ 0.28
VAMP7-201ENST00000262640 CHL1O00533 1208 aa16.81■□□□□ 0.28
VAMP7-201ENST00000262640 ZNF530Q6P9A1 599 aaPredicted RBP16.81■□□□□ 0.28
VAMP7-201ENST00000262640 TATP17735 454 aaPredicted RBP16.8■□□□□ 0.28
VAMP7-201ENST00000262640 AKAP4Q5JQC9 854 aa16.8■□□□□ 0.28
VAMP7-201ENST00000262640 PLIN1O60240 522 aa16.8■□□□□ 0.28
VAMP7-201ENST00000262640 BCAR3O75815 825 aa16.8■□□□□ 0.28
VAMP7-201ENST00000262640 ZNF428Q96B54 188 aa16.79■□□□□ 0.28
VAMP7-201ENST00000262640 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.79■□□□□ 0.28
VAMP7-201ENST00000262640 COL14A1Q05707 1796 aaKnown RBP16.79■□□□□ 0.28
VAMP7-201ENST00000262640 C1orf141Q5JVX7 400 aa16.79■□□□□ 0.28
VAMP7-201ENST00000262640 TOM1L2Q6ZVM7 507 aa16.78■□□□□ 0.28
VAMP7-201ENST00000262640 IL17REQ8NFR9 667 aa16.78■□□□□ 0.28
VAMP7-201ENST00000262640 EVA1CP58658 441 aa16.78■□□□□ 0.28
VAMP7-201ENST00000262640 PPP4R2Q9NY27 417 aa16.78■□□□□ 0.28
VAMP7-201ENST00000262640 CEMIPQ8WUJ3 1361 aa16.78■□□□□ 0.28
VAMP7-201ENST00000262640 MEGF6O75095 1541 aa16.78■□□□□ 0.28
VAMP7-201ENST00000262640 CARD10Q9BWT7 1032 aa16.77■□□□□ 0.28
VAMP7-201ENST00000262640 BABAM1Q9NWV8 329 aa16.77■□□□□ 0.28
VAMP7-201ENST00000262640 SPG7Q9UQ90 795 aa16.77■□□□□ 0.28
VAMP7-201ENST00000262640 OVOS2A0A0G2JMS6 1433 aa16.76■□□□□ 0.27
VAMP7-201ENST00000262640 ALDH1L2Q3SY69 923 aa16.76■□□□□ 0.27
VAMP7-201ENST00000262640 STRN4Q9NRL3 753 aa16.76■□□□□ 0.27
VAMP7-201ENST00000262640 BTG4Q9NY30 223 aa16.75■□□□□ 0.27
VAMP7-201ENST00000262640 TSPYL4Q9UJ04 414 aa16.75■□□□□ 0.27
VAMP7-201ENST00000262640 TAF7Q15545 349 aaPredicted RBP16.75■□□□□ 0.27
VAMP7-201ENST00000262640 VAMP4O75379 141 aa16.74■□□□□ 0.27
VAMP7-201ENST00000262640 CANXP27824 592 aaKnown RBP16.74■□□□□ 0.27
VAMP7-201ENST00000262640 LARP1Q6PKG0 1096 aaKnown RBP16.74■□□□□ 0.27
VAMP7-201ENST00000262640 SMC4Q9NTJ3 1288 aa16.74■□□□□ 0.27
VAMP7-201ENST00000262640 TWISTNBQ3B726 338 aaPredicted RBP16.74■□□□□ 0.27
VAMP7-201ENST00000262640 C8orf58Q8NAV2 365 aa16.74■□□□□ 0.27
VAMP7-201ENST00000262640 SSH1Q8WYL5 1049 aa16.74■□□□□ 0.27
VAMP7-201ENST00000262640 TSPYL6Q8N831 410 aa16.73■□□□□ 0.27
VAMP7-201ENST00000262640 BCL2L13Q9BXK5 485 aa16.73■□□□□ 0.27
VAMP7-201ENST00000262640 PKD1L3Q7Z443 1732 aa16.73■□□□□ 0.27
VAMP7-201ENST00000262640 RNMTO43148 476 aaKnown RBP16.73■□□□□ 0.27
VAMP7-201ENST00000262640 PDE3AQ14432 1141 aa16.73■□□□□ 0.27
VAMP7-201ENST00000262640 C20orf194Q5TEA3 1177 aa16.73■□□□□ 0.27
VAMP7-201ENST00000262640 EXOC6Q8TAG9 804 aa16.73■□□□□ 0.27
VAMP7-201ENST00000262640 LGR6Q9HBX8 967 aa16.73■□□□□ 0.27
VAMP7-201ENST00000262640 PARP4Q9UKK3 1724 aaKnown RBP16.73■□□□□ 0.27
VAMP7-201ENST00000262640 JCADQ9P266 1359 aa16.72■□□□□ 0.27
VAMP7-201ENST00000262640 MPRIPQ6WCQ1 1025 aa16.72■□□□□ 0.27
VAMP7-201ENST00000262640 FRAT1Q92837 279 aaPredicted RBP16.72■□□□□ 0.27
VAMP7-201ENST00000262640 MIS18AQ9NYP9 233 aa16.72■□□□□ 0.27
VAMP7-201ENST00000262640 IL2RBP14784 551 aa16.71■□□□□ 0.27
VAMP7-201ENST00000262640 PHKG2P15735 406 aa16.71■□□□□ 0.27
VAMP7-201ENST00000262640 BRPF1P55201 1214 aaPredicted RBP16.71■□□□□ 0.27
VAMP7-201ENST00000262640 TEFQ10587 303 aa16.71■□□□□ 0.27
VAMP7-201ENST00000262640 IFNL2Q8IZJ0 200 aa16.71■□□□□ 0.27
VAMP7-201ENST00000262640 CRBNQ96SW2 442 aa16.71■□□□□ 0.27
VAMP7-201ENST00000262640 ADAMTS7Q9UKP4 1686 aa16.71■□□□□ 0.27
VAMP7-201ENST00000262640 ADAMTS2O95450 1211 aa16.71■□□□□ 0.26
VAMP7-201ENST00000262640 KIF16BQ96L93 1317 aa16.71■□□□□ 0.26
VAMP7-201ENST00000262640 ELL2O00472 640 aaPredicted RBP16.7■□□□□ 0.26
VAMP7-201ENST00000262640 ZKSCAN2Q63HK3 967 aa16.7■□□□□ 0.26
VAMP7-201ENST00000262640 NUTM2BA6NNL0 878 aaPredicted RBP16.69■□□□□ 0.26
VAMP7-201ENST00000262640 NUTM2EB1AL46 878 aaPredicted RBP16.69■□□□□ 0.26
VAMP7-201ENST00000262640 HSP90AB1P08238 724 aaKnown RBP16.69■□□□□ 0.26
VAMP7-201ENST00000262640 NUTM2AQ8IVF1 878 aaPredicted RBP16.69■□□□□ 0.26
VAMP7-201ENST00000262640 MS4A1P11836 297 aa16.69■□□□□ 0.26
VAMP7-201ENST00000262640 ZCRB1Q8TBF4 217 aaKnown RBP16.69■□□□□ 0.26
VAMP7-201ENST00000262640 SOS1Q07889 1333 aaPredicted RBP16.69■□□□□ 0.26
VAMP7-201ENST00000262640 PLCH1Q4KWH8 1693 aa16.69■□□□□ 0.26
VAMP7-201ENST00000262640 PCDH11XQ9BZA7 1347 aa16.68■□□□□ 0.26
VAMP7-201ENST00000262640 PCDH11YQ9BZA8 1340 aa16.68■□□□□ 0.26
VAMP7-201ENST00000262640 IPO8O15397 1037 aaKnown RBP16.68■□□□□ 0.26
VAMP7-201ENST00000262640 CYP27B1O15528 508 aa16.68■□□□□ 0.26
VAMP7-201ENST00000262640 KRT24Q2M2I5 525 aa16.67■□□□□ 0.26
VAMP7-201ENST00000262640 MRPL50Q8N5N7 158 aaKnown RBP16.67■□□□□ 0.26
VAMP7-201ENST00000262640 DCAF5Q96JK2 942 aa16.67■□□□□ 0.26
VAMP7-201ENST00000262640 KDM6AO15550 1401 aaPredicted RBP16.67■□□□□ 0.26
VAMP7-201ENST00000262640 BTBD11A6QL63 1104 aa16.66■□□□□ 0.26
VAMP7-201ENST00000262640 NOB1Q9ULX3 412 aaKnown RBP16.66■□□□□ 0.26
VAMP7-201ENST00000262640 SPATA31A6Q5VVP1 1343 aa16.65■□□□□ 0.26
VAMP7-201ENST00000262640 NRAPQ86VF7 1730 aa16.65■□□□□ 0.26
VAMP7-201ENST00000262640 ATF7IPQ6VMQ6 1270 aa16.65■□□□□ 0.26
VAMP7-201ENST00000262640 KDM3BQ7LBC6 1761 aa16.65■□□□□ 0.26
VAMP7-201ENST00000262640 VIRMAQ69YN4 1812 aaKnown RBP16.65■□□□□ 0.26
VAMP7-201ENST00000262640 B4GALNT3Q6L9W6 998 aa16.64■□□□□ 0.26
VAMP7-201ENST00000262640 PANK1Q8TE04 598 aa16.64■□□□□ 0.26
VAMP7-201ENST00000262640 CCDC136Q96JN2 1154 aa16.64■□□□□ 0.26
VAMP7-201ENST00000262640 USP35Q9P2H5 1018 aa16.64■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms