RNA–Protein interactions for RNA: ENST00000262304.8

PKD1-201, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PKD1, Length 14,138 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-201ENST00000262304 SKAP1Q86WV1 359 aa11.95□□□□□ -0.5
PKD1-201ENST00000262304 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.95□□□□□ -0.5
PKD1-201ENST00000262304 KIF21BO75037 1637 aa11.95□□□□□ -0.5
PKD1-201ENST00000262304 UBTFL1P0CB47 393 aaPredicted RBP11.95□□□□□ -0.5
PKD1-201ENST00000262304 URI1O94763 535 aaPredicted RBP11.94□□□□□ -0.5
PKD1-201ENST00000262304 CCDC148Q8NFR7 591 aa11.94□□□□□ -0.5
PKD1-201ENST00000262304 DDX23Q9BUQ8 820 aaKnown RBP11.94□□□□□ -0.5
PKD1-201ENST00000262304 LRRC9Q6ZRR7 1453 aa11.94□□□□□ -0.5
PKD1-201ENST00000262304 IQCEQ6IPM2 695 aa11.94□□□□□ -0.5
PKD1-201ENST00000262304 CTR9Q6PD62 1173 aa11.94□□□□□ -0.5
PKD1-201ENST00000262304 MAATS1Q7Z4T9 603 aa11.94□□□□□ -0.5
PKD1-201ENST00000262304 CPLX3Q8WVH0 158 aa11.94□□□□□ -0.5
PKD1-201ENST00000262304 CFTRP13569 1480 aa11.94□□□□□ -0.5
PKD1-201ENST00000262304 GRIPAP1Q4V328 841 aa11.94□□□□□ -0.5
PKD1-201ENST00000262304 AFAP1Q8N556 730 aa11.94□□□□□ -0.5
PKD1-201ENST00000262304 CFAP100Q494V2 611 aa11.94□□□□□ -0.5
PKD1-201ENST00000262304 ROCK1Q13464 1354 aa11.94□□□□□ -0.5
PKD1-201ENST00000262304 ARHGAP29Q52LW3 1261 aa11.94□□□□□ -0.5
PKD1-201ENST00000262304 CABP2Q9NPB3 220 aa11.94□□□□□ -0.5
PKD1-201ENST00000262304 WDR70Q9NW82 654 aa11.94□□□□□ -0.5
PKD1-201ENST00000262304 LUZP1Q86V48 1076 aa11.94□□□□□ -0.5
PKD1-201ENST00000262304 MICALCLQ6ZW33 695 aa11.93□□□□□ -0.5
PKD1-201ENST00000262304 NLRP2Q9NX02 1062 aa11.93□□□□□ -0.5
PKD1-201ENST00000262304 VGLL3A8MV65 326 aa11.93□□□□□ -0.5
PKD1-201ENST00000262304 CALCOCO1Q9P1Z2 691 aa11.93□□□□□ -0.5
PKD1-201ENST00000262304 JAKMIP3Q5VZ66 844 aa11.93□□□□□ -0.5
PKD1-201ENST00000262304 RRBP1Q9P2E9 1410 aaKnown RBP11.93□□□□□ -0.5
PKD1-201ENST00000262304 CDCA7LQ96GN5 454 aa11.93□□□□□ -0.5
PKD1-201ENST00000262304 SURF6O75683 361 aaKnown RBP11.93□□□□□ -0.5
PKD1-201ENST00000262304 SPTY2D1Q68D10 685 aaPredicted RBP11.93□□□□□ -0.5
PKD1-201ENST00000262304 SPATA24Q86W54 205 aa11.92□□□□□ -0.5
PKD1-201ENST00000262304 UPF3BQ9BZI7 483 aaKnown RBP11.92□□□□□ -0.5
PKD1-201ENST00000262304 RAPGEF4Q8WZA2 1011 aa11.92□□□□□ -0.5
PKD1-201ENST00000262304 DESP17661 470 aa11.92□□□□□ -0.5
PKD1-201ENST00000262304 IRX3P78415 501 aaPredicted RBP11.92□□□□□ -0.5
PKD1-201ENST00000262304 PRKRIP1Q9H875 184 aaPredicted RBP11.92□□□□□ -0.5
PKD1-201ENST00000262304 PTPN14Q15678 1187 aa11.92□□□□□ -0.5
PKD1-201ENST00000262304 SPATA32Q96LK8 384 aa11.92□□□□□ -0.5
PKD1-201ENST00000262304 TTC39AQ5SRH9 613 aa11.92□□□□□ -0.5
PKD1-201ENST00000262304 LARP1BQ659C4 914 aaKnown RBP11.92□□□□□ -0.5
PKD1-201ENST00000262304 DDX58O95786 925 aaKnown RBP11.92□□□□□ -0.5
PKD1-201ENST00000262304 UBA5Q9GZZ9 404 aa11.92□□□□□ -0.5
PKD1-201ENST00000262304 AK9Q5TCS8 1911 aa11.92□□□□□ -0.5
PKD1-201ENST00000262304 SCLT1Q96NL6 688 aa11.92□□□□□ -0.5
PKD1-201ENST00000262304 STAMBPO95630 424 aa11.92□□□□□ -0.5
PKD1-201ENST00000262304 ARID4AP29374 1257 aaPredicted RBP11.92□□□□□ -0.5
PKD1-201ENST00000262304 LUC7LQ9NQ29 371 aaKnown RBP11.92□□□□□ -0.5
PKD1-201ENST00000262304 PPP1R1BQ9UD71 204 aaPredicted RBP11.92□□□□□ -0.5
PKD1-201ENST00000262304 FAM160A1Q05DH4 1040 aa11.92□□□□□ -0.5
PKD1-201ENST00000262304 SART3Q15020 963 aaKnown RBP11.92□□□□□ -0.5
PKD1-201ENST00000262304 FERMT3Q86UX7 667 aa11.91□□□□□ -0.5
PKD1-201ENST00000262304 ERICH3Q5RHP9 1530 aa11.91□□□□□ -0.5
PKD1-201ENST00000262304 FLIIQ13045 1269 aa11.91□□□□□ -0.5
PKD1-201ENST00000262304 HLTFQ14527 1009 aaKnown RBP eCLIP11.91□□□□□ -0.51e-7■■■■■ 28.1
PKD1-201ENST00000262304 ZNF830Q96NB3 372 aaPredicted RBP11.91□□□□□ -0.5
PKD1-201ENST00000262304 GPRASP1Q5JY77 1395 aa11.91□□□□□ -0.5
PKD1-201ENST00000262304 PPFIA3O75145 1194 aa11.91□□□□□ -0.5
PKD1-201ENST00000262304 BMS1Q14692 1282 aaKnown RBP11.91□□□□□ -0.5
PKD1-201ENST00000262304 DRC1Q96MC2 740 aa11.91□□□□□ -0.5
PKD1-201ENST00000262304 NUP62CLQ9H1M0 184 aa11.91□□□□□ -0.5
PKD1-201ENST00000262304 TOPBP1Q92547 1522 aa11.91□□□□□ -0.5
PKD1-201ENST00000262304 WDR78Q5VTH9 848 aa11.91□□□□□ -0.5
PKD1-201ENST00000262304 API5Q9BZZ5 524 aaKnown RBP11.91□□□□□ -0.5
PKD1-201ENST00000262304 AKNAQ7Z591 1439 aa11.91□□□□□ -0.5
PKD1-201ENST00000262304 CBFA2T2O43439 604 aa11.91□□□□□ -0.5
PKD1-201ENST00000262304 ISM2Q6H9L7 571 aa11.91□□□□□ -0.5
PKD1-201ENST00000262304 LARP6Q9BRS8 491 aaKnown RBP11.91□□□□□ -0.5
PKD1-201ENST00000262304 SLC3A2P08195 630 aaKnown RBP11.91□□□□□ -0.5
PKD1-201ENST00000262304 CCDC175P0C221 793 aa11.9□□□□□ -0.5
PKD1-201ENST00000262304 TMEM132EQ6IEE7 984 aa11.9□□□□□ -0.5
PKD1-201ENST00000262304 RBM27Q9P2N5 1060 aaKnown RBP11.9□□□□□ -0.5
PKD1-201ENST00000262304 RSPH14Q9UHP6 348 aa11.9□□□□□ -0.5
PKD1-201ENST00000262304 TXNDC2Q86VQ3 553 aa11.9□□□□□ -0.5
PKD1-201ENST00000262304 BCAR3O75815 825 aa11.9□□□□□ -0.5
PKD1-201ENST00000262304 SYNJ1O43426 1573 aa11.9□□□□□ -0.5
PKD1-201ENST00000262304 CEP57Q86XR8 500 aa11.9□□□□□ -0.5
PKD1-201ENST00000262304 NOB1Q9ULX3 412 aaKnown RBP11.9□□□□□ -0.5
PKD1-201ENST00000262304 PDCP20941 246 aa11.9□□□□□ -0.5
PKD1-201ENST00000262304 PRPF4BQ13523 1007 aaKnown RBP11.9□□□□□ -0.5
PKD1-201ENST00000262304 SNAPC4Q5SXM2 1469 aa11.9□□□□□ -0.5
PKD1-201ENST00000262304 DNAJC21Q5F1R6 531 aaKnown RBP11.9□□□□□ -0.51
PKD1-201ENST00000262304 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.9□□□□□ -0.513e-6■■■□□ 15.5
PKD1-201ENST00000262304 V9GYY5 206 aaPredicted RBP11.9□□□□□ -0.51
PKD1-201ENST00000262304 KIF4BQ2VIQ3 1234 aa11.9□□□□□ -0.51
PKD1-201ENST00000262304 SOGA3Q5TF21 947 aa11.89□□□□□ -0.51
PKD1-201ENST00000262304 MCM4P33991 863 aa11.89□□□□□ -0.51
PKD1-201ENST00000262304 TIGD1Q96MW7 591 aa11.89□□□□□ -0.51
PKD1-201ENST00000262304 PAXIP1Q6ZW49 1069 aaPredicted RBP11.89□□□□□ -0.51
PKD1-201ENST00000262304 KIF7Q2M1P5 1343 aa11.89□□□□□ -0.51
PKD1-201ENST00000262304 C9orf84Q5VXU9 1444 aa11.89□□□□□ -0.51
PKD1-201ENST00000262304 BIN1O00499 593 aa11.89□□□□□ -0.51
PKD1-201ENST00000262304 COMMD10Q9Y6G5 202 aa11.89□□□□□ -0.51
PKD1-201ENST00000262304 PLEKHH2Q8IVE3 1493 aa11.89□□□□□ -0.51
PKD1-201ENST00000262304 CYP46A1Q9Y6A2 500 aa11.89□□□□□ -0.51
PKD1-201ENST00000262304 KRT85P78386 507 aa11.89□□□□□ -0.51
PKD1-201ENST00000262304 NUMA1Q14980 2115 aa11.89□□□□□ -0.51
PKD1-201ENST00000262304 NAA25Q14CX7 972 aa11.89□□□□□ -0.51
PKD1-201ENST00000262304 HYPKQ9NX55 129 aa11.89□□□□□ -0.51
PKD1-201ENST00000262304 MICAL3Q7RTP6 2002 aa11.88□□□□□ -0.51
PKD1-201ENST00000262304 USP5P45974 858 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms