RNA–Protein interactions for RNA: ENST00000261667.7

KPNA3-201, Transcript of karyopherin subunit alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA3, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA3-201ENST00000261667 SMC2O95347 1197 aa12.63□□□□□ -0.39
KPNA3-201ENST00000261667 LRRCC1Q9C099 1032 aa12.63□□□□□ -0.39
KPNA3-201ENST00000261667 BCL2L12Q9HB09 334 aa12.63□□□□□ -0.39
KPNA3-201ENST00000261667 USP47Q96K76 1375 aa12.63□□□□□ -0.39
KPNA3-201ENST00000261667 SETSIPP0DME0 302 aa12.63□□□□□ -0.39
KPNA3-201ENST00000261667 INCENPQ9NQS7 918 aa12.63□□□□□ -0.39
KPNA3-201ENST00000261667 RBM27Q9P2N5 1060 aaKnown RBP12.63□□□□□ -0.39
KPNA3-201ENST00000261667 GLI2P10070 1586 aa12.63□□□□□ -0.39
KPNA3-201ENST00000261667 EIF2AK4Q9P2K8 1649 aaKnown RBP12.63□□□□□ -0.39
KPNA3-201ENST00000261667 GOLGA6L10A6NI86 522 aa12.63□□□□□ -0.39
KPNA3-201ENST00000261667 CCDC27Q2M243 656 aa12.63□□□□□ -0.39
KPNA3-201ENST00000261667 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.63□□□□□ -0.39
KPNA3-201ENST00000261667 IRX5P78411 483 aaPredicted RBP12.62□□□□□ -0.39
KPNA3-201ENST00000261667 SMC3Q9UQE7 1217 aa12.62□□□□□ -0.39
KPNA3-201ENST00000261667 MROH1Q8NDA8 1641 aa12.62□□□□□ -0.39
KPNA3-201ENST00000261667 RNF187Q5TA31 235 aaPredicted RBP12.62□□□□□ -0.39
KPNA3-201ENST00000261667 AP1ARQ63HQ0 302 aa12.62□□□□□ -0.39
KPNA3-201ENST00000261667 TRMT1Q9NXH9 659 aaKnown RBP12.62□□□□□ -0.39
KPNA3-201ENST00000261667 GOLGA6L7A0A1B0GV03 622 aa12.62□□□□□ -0.39
KPNA3-201ENST00000261667 H3BQV1 296 aa12.62□□□□□ -0.39
KPNA3-201ENST00000261667 IFFO2Q5TF58 517 aa12.62□□□□□ -0.39
KPNA3-201ENST00000261667 CEP57Q86XR8 500 aa12.62□□□□□ -0.39
KPNA3-201ENST00000261667 ERBINQ96RT1 1412 aa12.62□□□□□ -0.39
KPNA3-201ENST00000261667 URI1O94763 535 aaPredicted RBP12.62□□□□□ -0.39
KPNA3-201ENST00000261667 HNRNPMP52272 730 aaKnown RBP eCLIP12.62□□□□□ -0.394e-6■■■■□ 23.6
KPNA3-201ENST00000261667 CEP135Q66GS9 1140 aa12.62□□□□□ -0.39
KPNA3-201ENST00000261667 PRDM4Q9UKN5 801 aa12.62□□□□□ -0.39
KPNA3-201ENST00000261667 FAM135AQ9P2D6 1515 aa12.62□□□□□ -0.39
KPNA3-201ENST00000261667 EIF3AQ14152 1382 aaKnown RBP12.62□□□□□ -0.39
KPNA3-201ENST00000261667 A0A1B0GUA9 196 aa12.61□□□□□ -0.39
KPNA3-201ENST00000261667 BAG4O95429 457 aaKnown RBP12.61□□□□□ -0.39
KPNA3-201ENST00000261667 PDILTQ8N807 584 aa12.61□□□□□ -0.39
KPNA3-201ENST00000261667 RIOK3O14730 519 aaKnown RBP12.61□□□□□ -0.39
KPNA3-201ENST00000261667 TSR1Q2NL82 804 aaKnown RBP12.61□□□□□ -0.39
KPNA3-201ENST00000261667 NAA25Q14CX7 972 aa12.61□□□□□ -0.39
KPNA3-201ENST00000261667 PPRC1Q5VV67 1664 aaKnown RBP12.6□□□□□ -0.39
KPNA3-201ENST00000261667 FANCAO15360 1455 aa12.6□□□□□ -0.39
KPNA3-201ENST00000261667 NINLQ9Y2I6 1382 aa12.6□□□□□ -0.39
KPNA3-201ENST00000261667 PPM1EQ8WY54 764 aa12.6□□□□□ -0.39
KPNA3-201ENST00000261667 PRIM1P49642 420 aaKnown RBP12.6□□□□□ -0.39
KPNA3-201ENST00000261667 SRRTQ9BXP5 876 aaKnown RBP12.6□□□□□ -0.39
KPNA3-201ENST00000261667 RIPK4P57078 832 aa12.6□□□□□ -0.39
KPNA3-201ENST00000261667 KANK1Q14678 1352 aa12.59□□□□□ -0.39
KPNA3-201ENST00000261667 APAF1O14727 1248 aa12.59□□□□□ -0.39
KPNA3-201ENST00000261667 CLSTN1O94985 981 aa12.59□□□□□ -0.39
KPNA3-201ENST00000261667 NEK4P51957 841 aa12.59□□□□□ -0.39
KPNA3-201ENST00000261667 LRSAM1Q6UWE0 723 aa12.59□□□□□ -0.39
KPNA3-201ENST00000261667 FMNL2Q96PY5 1086 aa12.59□□□□□ -0.39
KPNA3-201ENST00000261667 CDC45O75419 566 aa12.59□□□□□ -0.39
KPNA3-201ENST00000261667 INTS3Q68E01 1043 aaKnown RBP12.59□□□□□ -0.39
KPNA3-201ENST00000261667 NAT10Q9H0A0 1025 aaKnown RBP12.59□□□□□ -0.39
KPNA3-201ENST00000261667 EZRP15311 586 aaKnown RBP12.59□□□□□ -0.39
KPNA3-201ENST00000261667 SMARCC1Q92922 1105 aaPredicted RBP12.59□□□□□ -0.39
KPNA3-201ENST00000261667 SUDS3Q9H7L9 328 aaPredicted RBP12.59□□□□□ -0.39
KPNA3-201ENST00000261667 ATP7AQ04656 1500 aa12.59□□□□□ -0.39
KPNA3-201ENST00000261667 KIF7Q2M1P5 1343 aa12.59□□□□□ -0.39
KPNA3-201ENST00000261667 IPO7O95373 1038 aaKnown RBP12.58□□□□□ -0.39
KPNA3-201ENST00000261667 ZNF853P0CG23 659 aa12.58□□□□□ -0.39
KPNA3-201ENST00000261667 ENOX2Q16206 610 aaKnown RBP12.58□□□□□ -0.39
KPNA3-201ENST00000261667 PANK3Q9H999 370 aa12.58□□□□□ -0.39
KPNA3-201ENST00000261667 DDX19BQ9UMR2 479 aa12.58□□□□□ -0.39
KPNA3-201ENST00000261667 RICTORQ6R327 1708 aa12.58□□□□□ -0.4
KPNA3-201ENST00000261667 CASQ1P31415 396 aa12.58□□□□□ -0.4
KPNA3-201ENST00000261667 DZIP1LQ8IYY4 767 aaKnown RBP12.58□□□□□ -0.4
KPNA3-201ENST00000261667 CAGE1Q8TC20 777 aa12.58□□□□□ -0.4
KPNA3-201ENST00000261667 ZNF500O60304 480 aaPredicted RBP12.58□□□□□ -0.4
KPNA3-201ENST00000261667 CCDC73Q6ZRK6 1079 aa12.58□□□□□ -0.4
KPNA3-201ENST00000261667 FMNL3Q8IVF7 1028 aa12.58□□□□□ -0.4
KPNA3-201ENST00000261667 RILPL2Q969X0 211 aa12.58□□□□□ -0.4
KPNA3-201ENST00000261667 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.58□□□□□ -0.4
KPNA3-201ENST00000261667 POLR1AO95602 1720 aaPredicted RBP12.58□□□□□ -0.4
KPNA3-201ENST00000261667 RRP7AQ9Y3A4 280 aaKnown RBP12.58□□□□□ -0.4
KPNA3-201ENST00000261667 ATP10AO60312 1499 aa12.58□□□□□ -0.4
KPNA3-201ENST00000261667 E2F4Q16254 413 aa12.57□□□□□ -0.4
KPNA3-201ENST00000261667 C8orf34Q49A92 452 aa12.57□□□□□ -0.4
KPNA3-201ENST00000261667 JAKMIP3Q5VZ66 844 aa12.57□□□□□ -0.4
KPNA3-201ENST00000261667 ICE2Q659A1 982 aa12.57□□□□□ -0.4
KPNA3-201ENST00000261667 PIK3R5Q8WYR1 880 aa12.57□□□□□ -0.4
KPNA3-201ENST00000261667 TBC1D32Q96NH3 1257 aa12.57□□□□□ -0.4
KPNA3-201ENST00000261667 CRACR2AQ9BSW2 395 aa12.57□□□□□ -0.4
KPNA3-201ENST00000261667 JRKLQ9Y4A0 524 aa12.57□□□□□ -0.4
KPNA3-201ENST00000261667 PNISRQ8TF01 805 aaKnown RBP12.57□□□□□ -0.4
KPNA3-201ENST00000261667 ANO2Q9NQ90 1003 aa12.57□□□□□ -0.4
KPNA3-201ENST00000261667 RNF17Q9BXT8 1623 aaKnown RBP12.57□□□□□ -0.4
KPNA3-201ENST00000261667 CCDC144AA2RUR9 1427 aa12.57□□□□□ -0.4
KPNA3-201ENST00000261667 ZSCAN26Q16670 478 aa12.57□□□□□ -0.4
KPNA3-201ENST00000261667 GBP3Q9H0R5 595 aa12.57□□□□□ -0.4
KPNA3-201ENST00000261667 SMTNL1A8MU46 457 aa12.56□□□□□ -0.4
KPNA3-201ENST00000261667 NUP133Q8WUM0 1156 aa12.56□□□□□ -0.4
KPNA3-201ENST00000261667 TMEM51Q9NW97 253 aa12.56□□□□□ -0.4
KPNA3-201ENST00000261667 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.56□□□□□ -0.4
KPNA3-201ENST00000261667 E9PCH4 1651 aa12.56□□□□□ -0.4
KPNA3-201ENST00000261667 BIRC2Q13490 618 aa12.56□□□□□ -0.4
KPNA3-201ENST00000261667 C20orf194Q5TEA3 1177 aa12.56□□□□□ -0.4
KPNA3-201ENST00000261667 FRMPD1Q5SYB0 1578 aa12.56□□□□□ -0.4
KPNA3-201ENST00000261667 PRDM15P57071 1507 aaPredicted RBP12.56□□□□□ -0.4
KPNA3-201ENST00000261667 MICALCLQ6ZW33 695 aa12.56□□□□□ -0.4
KPNA3-201ENST00000261667 TNMDQ9H2S6 317 aa12.56□□□□□ -0.4
KPNA3-201ENST00000261667 PLA2R1Q13018 1463 aa12.56□□□□□ -0.4
KPNA3-201ENST00000261667 CLNS1AP54105 237 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms