RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 FAM177A1Q8N128 213 aaPredicted RBP12.16□□□□□ -0.46
PALB2-201ENST00000261584 C14orf93Q9H972 538 aaKnown RBP12.16□□□□□ -0.46
PALB2-201ENST00000261584 GOLGA6L19H0YKK7 550 aa12.16□□□□□ -0.46
PALB2-201ENST00000261584 MX1P20591 662 aa12.16□□□□□ -0.46
PALB2-201ENST00000261584 PRPF40BQ6NWY9 871 aaKnown RBP12.16□□□□□ -0.46
PALB2-201ENST00000261584 FAM184AQ8NB25 1140 aa12.16□□□□□ -0.46
PALB2-201ENST00000261584 GCC2Q8IWJ2 1684 aa12.16□□□□□ -0.46
PALB2-201ENST00000261584 PLA2R1Q13018 1463 aa12.15□□□□□ -0.46
PALB2-201ENST00000261584 SKIDA1Q1XH10 827 aa12.15□□□□□ -0.46
PALB2-201ENST00000261584 PPP4R3BQ5MIZ7 849 aa12.15□□□□□ -0.46
PALB2-201ENST00000261584 CFAP44Q96MT7 982 aa12.15□□□□□ -0.46
PALB2-201ENST00000261584 TRMT1Q9NXH9 659 aaKnown RBP12.15□□□□□ -0.46
PALB2-201ENST00000261584 IFT140Q96RY7 1462 aa12.15□□□□□ -0.46
PALB2-201ENST00000261584 GUCY1B3Q02153 619 aa12.15□□□□□ -0.46
PALB2-201ENST00000261584 TPD52L1Q16890 204 aaPredicted RBP12.15□□□□□ -0.46
PALB2-201ENST00000261584 HDGFL1Q5TGJ6 251 aa12.15□□□□□ -0.46
PALB2-201ENST00000261584 USP26Q9BXU7 913 aa12.15□□□□□ -0.46
PALB2-201ENST00000261584 PIK3C2GO75747 1445 aa12.15□□□□□ -0.46
PALB2-201ENST00000261584 POLR3AO14802 1390 aaPredicted RBP12.15□□□□□ -0.47
PALB2-201ENST00000261584 INSRP06213 1382 aa12.15□□□□□ -0.47
PALB2-201ENST00000261584 RBM25P49756 843 aaKnown RBP12.15□□□□□ -0.47
PALB2-201ENST00000261584 SF3A1Q15459 793 aaKnown RBP12.15□□□□□ -0.47
PALB2-201ENST00000261584 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.15□□□□□ -0.47
PALB2-201ENST00000261584 WDR7Q9Y4E6 1490 aa12.14□□□□□ -0.47
PALB2-201ENST00000261584 GOLGA6L6A8MZA4 724 aa12.14□□□□□ -0.47
PALB2-201ENST00000261584 TEFQ10587 303 aa12.14□□□□□ -0.47
PALB2-201ENST00000261584 SIRT2Q8IXJ6 389 aa12.14□□□□□ -0.47
PALB2-201ENST00000261584 SNX21Q969T3 373 aa12.14□□□□□ -0.47
PALB2-201ENST00000261584 CWC22Q9HCG8 908 aaKnown RBP12.14□□□□□ -0.47
PALB2-201ENST00000261584 PALD1Q9ULE6 856 aa12.14□□□□□ -0.47
PALB2-201ENST00000261584 ZKSCAN1P17029 563 aaPredicted RBP12.14□□□□□ -0.47
PALB2-201ENST00000261584 GPT2Q8TD30 523 aa12.14□□□□□ -0.47
PALB2-201ENST00000261584 LMBRD1Q9NUN5 540 aa12.14□□□□□ -0.47
PALB2-201ENST00000261584 DNAJC2Q99543 621 aaKnown RBP12.14□□□□□ -0.47
PALB2-201ENST00000261584 MBD5Q9P267 1494 aa12.13□□□□□ -0.47
PALB2-201ENST00000261584 CT47B1P0C2W7 299 aaPredicted RBP12.13□□□□□ -0.47
PALB2-201ENST00000261584 GNL2Q13823 731 aaKnown RBP12.13□□□□□ -0.47
PALB2-201ENST00000261584 LARP1BQ659C4 914 aaKnown RBP12.13□□□□□ -0.47
PALB2-201ENST00000261584 SYTL4Q96C24 671 aaPredicted RBP12.13□□□□□ -0.47
PALB2-201ENST00000261584 PODXL2Q9NZ53 605 aa12.13□□□□□ -0.47
PALB2-201ENST00000261584 OFD1O75665 1012 aa12.13□□□□□ -0.47
PALB2-201ENST00000261584 PDE1AP54750 535 aa12.13□□□□□ -0.47
PALB2-201ENST00000261584 ALDH1L2Q3SY69 923 aa12.13□□□□□ -0.47
PALB2-201ENST00000261584 LRRC2Q9BYS8 371 aa12.13□□□□□ -0.47
PALB2-201ENST00000261584 TMX1Q9H3N1 280 aa12.13□□□□□ -0.47
PALB2-201ENST00000261584 LRSAM1Q6UWE0 723 aa12.13□□□□□ -0.47
PALB2-201ENST00000261584 RAB11FIP4Q86YS3 637 aa12.13□□□□□ -0.47
PALB2-201ENST00000261584 CCDC8Q9H0W5 538 aaPredicted RBP12.13□□□□□ -0.47
PALB2-201ENST00000261584 ZKSCAN5Q9Y2L8 839 aa12.13□□□□□ -0.47
PALB2-201ENST00000261584 FSD1Q9BTV5 496 aa12.12□□□□□ -0.47
PALB2-201ENST00000261584 ISY1Q9ULR0 285 aaKnown RBP12.12□□□□□ -0.47
PALB2-201ENST00000261584 A0A1W2PP64 1363 aa12.12□□□□□ -0.47
PALB2-201ENST00000261584 NUDT16Q96DE0 195 aaKnown RBP12.12□□□□□ -0.47
PALB2-201ENST00000261584 DNM1Q05193 864 aaKnown RBP12.12□□□□□ -0.47
PALB2-201ENST00000261584 ISM2Q6H9L7 571 aa12.12□□□□□ -0.47
PALB2-201ENST00000261584 SASS6Q6UVJ0 657 aa12.12□□□□□ -0.47
PALB2-201ENST00000261584 NEUROD6Q96NK8 337 aa12.12□□□□□ -0.47
PALB2-201ENST00000261584 KIF3AQ9Y496 699 aa12.12□□□□□ -0.47
PALB2-201ENST00000261584 CEP85Q6P2H3 762 aa12.11□□□□□ -0.47
PALB2-201ENST00000261584 RPAP2Q8IXW5 612 aaPredicted RBP12.11□□□□□ -0.47
PALB2-201ENST00000261584 CHMP4CQ96CF2 233 aa12.11□□□□□ -0.47
PALB2-201ENST00000261584 STAC3Q96MF2 364 aa12.11□□□□□ -0.47
PALB2-201ENST00000261584 WDR33Q9C0J8 1336 aaKnown RBP12.11□□□□□ -0.47
PALB2-201ENST00000261584 HOMER1Q86YM7 354 aa12.11□□□□□ -0.47
PALB2-201ENST00000261584 CCDC85AQ96PX6 553 aaPredicted RBP12.11□□□□□ -0.47
PALB2-201ENST00000261584 BOLA2Q9H3K6 86 aa12.11□□□□□ -0.47
PALB2-201ENST00000261584 KIAA0556O60303 1618 aa12.11□□□□□ -0.47
PALB2-201ENST00000261584 ARHGEF12Q9NZN5 1544 aa12.11□□□□□ -0.47
PALB2-201ENST00000261584 PIP4K2AP48426 406 aaPredicted RBP12.11□□□□□ -0.47
PALB2-201ENST00000261584 PDCL2Q8N4E4 241 aa12.11□□□□□ -0.47
PALB2-201ENST00000261584 ZFP91Q96JP5 570 aaPredicted RBP12.11□□□□□ -0.47
PALB2-201ENST00000261584 UGGT1Q9NYU2 1555 aa12.11□□□□□ -0.47
PALB2-201ENST00000261584 ATP2B1P20020 1258 aa12.1□□□□□ -0.47
PALB2-201ENST00000261584 ATP6V1DQ9Y5K8 247 aa12.1□□□□□ -0.47
PALB2-201ENST00000261584 MYL6BP14649 208 aa12.1□□□□□ -0.47
PALB2-201ENST00000261584 TAF7Q15545 349 aaPredicted RBP12.1□□□□□ -0.47
PALB2-201ENST00000261584 TOMM22Q9NS69 142 aa12.1□□□□□ -0.47
PALB2-201ENST00000261584 CSB-PGBD3P0DP91 1061 aa12.09□□□□□ -0.47
PALB2-201ENST00000261584 CLASRPQ8N2M8 674 aaKnown RBP12.09□□□□□ -0.47
PALB2-201ENST00000261584 TNMDQ9H2S6 317 aa12.09□□□□□ -0.47
PALB2-201ENST00000261584 NOLC1Q14978 699 aaKnown RBP eCLIP12.09□□□□□ -0.47
PALB2-201ENST00000261584 TTLL5Q6EMB2 1281 aa12.09□□□□□ -0.47
PALB2-201ENST00000261584 ERCC4Q92889 916 aaPredicted RBP12.09□□□□□ -0.47
PALB2-201ENST00000261584 PA2G4Q9UQ80 394 aaKnown RBP12.09□□□□□ -0.47
PALB2-201ENST00000261584 AACSQ86V21 672 aa12.09□□□□□ -0.47
PALB2-201ENST00000261584 DCTPP1Q9H773 170 aa12.09□□□□□ -0.47
PALB2-201ENST00000261584 PDRG1Q9NUG6 133 aa12.09□□□□□ -0.47
PALB2-201ENST00000261584 A0A087WWV3 80 aa12.08□□□□□ -0.47
PALB2-201ENST00000261584 PNMA6EA0A0J9YXQ4 647 aa12.08□□□□□ -0.47
PALB2-201ENST00000261584 GNAI3P08754 354 aa12.08□□□□□ -0.47
PALB2-201ENST00000261584 CNTROBQ8N137 903 aa12.08□□□□□ -0.47
PALB2-201ENST00000261584 GPATCH3Q96I76 525 aa12.08□□□□□ -0.47
PALB2-201ENST00000261584 SDF4Q9BRK5 362 aa12.08□□□□□ -0.47
PALB2-201ENST00000261584 CGNQ9P2M7 1197 aaKnown RBP12.08□□□□□ -0.47
PALB2-201ENST00000261584 NDUFB9Q9Y6M9 179 aa12.08□□□□□ -0.47
PALB2-201ENST00000261584 HSP90AA4PQ58FG1 418 aa12.08□□□□□ -0.48
PALB2-201ENST00000261584 ANKRD44Q8N8A2 993 aa12.08□□□□□ -0.48
PALB2-201ENST00000261584 GJB2P29033 226 aa12.08□□□□□ -0.48
PALB2-201ENST00000261584 FLIIQ13045 1269 aa12.08□□□□□ -0.48
PALB2-201ENST00000261584 G3BP1Q13283 466 aaKnown RBP eCLIP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms