RNA–Protein interactions for RNA: ENST00000261318.4

C12orf49-201, Transcript of chromosome 12 open reading frame 49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C12orf49, Length 8,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf49-201ENST00000261318 PLEKHH1Q9ULM0 1364 aa17.51■□□□□ 0.39
C12orf49-201ENST00000261318 CAMK4Q16566 473 aa17.51■□□□□ 0.39
C12orf49-201ENST00000261318 CFAP100Q494V2 611 aa17.51■□□□□ 0.39
C12orf49-201ENST00000261318 RPAP2Q8IXW5 612 aaPredicted RBP17.51■□□□□ 0.39
C12orf49-201ENST00000261318 ZSCAN25Q6NSZ9 544 aa17.51■□□□□ 0.39
C12orf49-201ENST00000261318 GNL3LQ9NVN8 582 aaKnown RBP17.51■□□□□ 0.39
C12orf49-201ENST00000261318 ATF3P18847 181 aa17.5■□□□□ 0.39
C12orf49-201ENST00000261318 ARHGAP29Q52LW3 1261 aa17.5■□□□□ 0.39
C12orf49-201ENST00000261318 KIAA1328Q86T90 577 aa17.5■□□□□ 0.39
C12orf49-201ENST00000261318 SFPQP23246 707 aaKnown RBP eCLIP17.5■□□□□ 0.39
C12orf49-201ENST00000261318 PDCL3Q9H2J4 239 aa17.5■□□□□ 0.39
C12orf49-201ENST00000261318 KAT6BQ8WYB5 2073 aa17.5■□□□□ 0.39
C12orf49-201ENST00000261318 CBX1P83916 185 aa17.49■□□□□ 0.39
C12orf49-201ENST00000261318 CCDC148Q8NFR7 591 aa17.49■□□□□ 0.39
C12orf49-201ENST00000261318 CDK19Q9BWU1 502 aa17.49■□□□□ 0.39
C12orf49-201ENST00000261318 CTNNA3Q9UI47 895 aa17.49■□□□□ 0.39
C12orf49-201ENST00000261318 GBP3Q9H0R5 595 aa17.49■□□□□ 0.39
C12orf49-201ENST00000261318 TOP2BQ02880 1626 aa17.49■□□□□ 0.39
C12orf49-201ENST00000261318 ANKRD18AQ8IVF6 992 aa17.48■□□□□ 0.39
C12orf49-201ENST00000261318 STK11IPQ8N1F8 1099 aa17.48■□□□□ 0.39
C12orf49-201ENST00000261318 PODXL2Q9NZ53 605 aa17.48■□□□□ 0.39
C12orf49-201ENST00000261318 NUP133Q8WUM0 1156 aa17.48■□□□□ 0.39
C12orf49-201ENST00000261318 FKBP4Q02790 459 aaKnown RBP eCLIP17.48■□□□□ 0.39
C12orf49-201ENST00000261318 TAX1BP1Q86VP1 789 aa17.48■□□□□ 0.39
C12orf49-201ENST00000261318 ZSCAN12O43309 604 aa17.47■□□□□ 0.39
C12orf49-201ENST00000261318 CRACR2AQ9BSW2 395 aa17.47■□□□□ 0.39
C12orf49-201ENST00000261318 CGNQ9P2M7 1197 aaKnown RBP17.47■□□□□ 0.39
C12orf49-201ENST00000261318 DAPK1P53355 1430 aa17.47■□□□□ 0.39
C12orf49-201ENST00000261318 PRDM10Q9NQV6 1147 aa17.47■□□□□ 0.39
C12orf49-201ENST00000261318 FCHSD2O94868 740 aa17.47■□□□□ 0.39
C12orf49-201ENST00000261318 TMPOP42166 694 aaKnown RBP17.47■□□□□ 0.39
C12orf49-201ENST00000261318 ZNF692Q9BU19 519 aaPredicted RBP17.47■□□□□ 0.39
C12orf49-201ENST00000261318 ANKRD30BQ9BXX2 1392 aa17.47■□□□□ 0.39
C12orf49-201ENST00000261318 CASQ1P31415 396 aa17.46■□□□□ 0.39
C12orf49-201ENST00000261318 XPCQ01831 940 aaPredicted RBP17.46■□□□□ 0.39
C12orf49-201ENST00000261318 IL1RAPL2Q9NP60 686 aa17.46■□□□□ 0.39
C12orf49-201ENST00000261318 NSD3Q9BZ95 1437 aa17.46■□□□□ 0.39
C12orf49-201ENST00000261318 MAP9Q49MG5 647 aa17.46■□□□□ 0.39
C12orf49-201ENST00000261318 WASF1Q92558 559 aa17.46■□□□□ 0.39
C12orf49-201ENST00000261318 CABP1Q9NZU7 370 aa17.46■□□□□ 0.39
C12orf49-201ENST00000261318 CCDC57Q2TAC2 916 aa17.46■□□□□ 0.39
C12orf49-201ENST00000261318 ZHX3Q9H4I2 956 aa17.46■□□□□ 0.39
C12orf49-201ENST00000261318 ANO10Q9NW15 660 aa17.46■□□□□ 0.39
C12orf49-201ENST00000261318 PRKCSHP14314 528 aaPredicted RBP17.46■□□□□ 0.39
C12orf49-201ENST00000261318 SCAND2PQ9GZW5 306 aaPredicted RBP17.46■□□□□ 0.39
C12orf49-201ENST00000261318 ZNF397Q8NF99 534 aaPredicted RBP17.46■□□□□ 0.38
C12orf49-201ENST00000261318 TNPO1Q92973 898 aaKnown RBP17.46■□□□□ 0.38
C12orf49-201ENST00000261318 TBC1D2Q9BYX2 928 aa17.46■□□□□ 0.38
C12orf49-201ENST00000261318 PTPN23Q9H3S7 1636 aa17.45■□□□□ 0.38
C12orf49-201ENST00000261318 CEP131Q9UPN4 1083 aa17.45■□□□□ 0.38
C12orf49-201ENST00000261318 INCENPQ9NQS7 918 aa17.45■□□□□ 0.38
C12orf49-201ENST00000261318 CCDC83Q8IWF9 413 aa17.45■□□□□ 0.38
C12orf49-201ENST00000261318 EIF5P55010 431 aaKnown RBP17.44■□□□□ 0.38
C12orf49-201ENST00000261318 DDX11Q96FC9 970 aa17.44■□□□□ 0.38
C12orf49-201ENST00000261318 FAM177BA6PVY3 158 aa17.44■□□□□ 0.38
C12orf49-201ENST00000261318 MYL6BP14649 208 aa17.44■□□□□ 0.38
C12orf49-201ENST00000261318 ANKRD62A6NC57 917 aa17.44■□□□□ 0.38
C12orf49-201ENST00000261318 CLIP2Q9UDT6 1046 aa17.44■□□□□ 0.38
C12orf49-201ENST00000261318 C20orf194Q5TEA3 1177 aa17.44■□□□□ 0.38
C12orf49-201ENST00000261318 MCM3P25205 808 aa17.44■□□□□ 0.38
C12orf49-201ENST00000261318 NFE2L2Q16236 605 aa17.44■□□□□ 0.38
C12orf49-201ENST00000261318 TMEM132AQ24JP5 1023 aa17.44■□□□□ 0.38
C12orf49-201ENST00000261318 EXOC6BQ9Y2D4 811 aa17.43■□□□□ 0.38
C12orf49-201ENST00000261318 KIF5CO60282 957 aa17.43■□□□□ 0.38
C12orf49-201ENST00000261318 MX1P20591 662 aa17.43■□□□□ 0.38
C12orf49-201ENST00000261318 RAB11FIP3O75154 756 aa17.43■□□□□ 0.38
C12orf49-201ENST00000261318 SHTN1A0MZ66 631 aa17.43■□□□□ 0.38
C12orf49-201ENST00000261318 SH2B1Q9NRF2 756 aaPredicted RBP17.43■□□□□ 0.38
C12orf49-201ENST00000261318 UBAC1Q9BSL1 405 aa17.43■□□□□ 0.38
C12orf49-201ENST00000261318 CALCOCO1Q9P1Z2 691 aa17.43■□□□□ 0.38
C12orf49-201ENST00000261318 MCM5P33992 734 aa17.43■□□□□ 0.38
C12orf49-201ENST00000261318 RARSP54136 660 aaKnown RBP17.43■□□□□ 0.38
C12orf49-201ENST00000261318 AFAP1Q8N556 730 aa17.43■□□□□ 0.38
C12orf49-201ENST00000261318 KIF1BPQ96EK5 621 aa17.43■□□□□ 0.38
C12orf49-201ENST00000261318 SOGA3Q5TF21 947 aa17.42■□□□□ 0.38
C12orf49-201ENST00000261318 GBP2P32456 591 aaPredicted RBP17.42■□□□□ 0.38
C12orf49-201ENST00000261318 ALDH1L2Q3SY69 923 aa17.42■□□□□ 0.38
C12orf49-201ENST00000261318 BMP2KQ9NSY1 1161 aaPredicted RBP17.42■□□□□ 0.38
C12orf49-201ENST00000261318 TATP17735 454 aaPredicted RBP17.42■□□□□ 0.38
C12orf49-201ENST00000261318 SSFA2P28290 1259 aa17.42■□□□□ 0.38
C12orf49-201ENST00000261318 IMMTQ16891 758 aaKnown RBP17.42■□□□□ 0.38
C12orf49-201ENST00000261318 LRPPRCP42704 1394 aaKnown RBP17.42■□□□□ 0.38
C12orf49-201ENST00000261318 AQRO60306 1485 aaKnown RBP eCLIP17.42■□□□□ 0.38
C12orf49-201ENST00000261318 TDO2P48775 406 aa17.41■□□□□ 0.38
C12orf49-201ENST00000261318 FERMT3Q86UX7 667 aa17.41■□□□□ 0.38
C12orf49-201ENST00000261318 ATAD2Q6PL18 1390 aa17.41■□□□□ 0.38
C12orf49-201ENST00000261318 CTAGE5O15320 804 aa17.41■□□□□ 0.38
C12orf49-201ENST00000261318 TNNT1P13805 278 aa17.41■□□□□ 0.38
C12orf49-201ENST00000261318 U3KPZ7 1027 aaPredicted RBP17.41■□□□□ 0.38
C12orf49-201ENST00000261318 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.41■□□□□ 0.38
C12orf49-201ENST00000261318 GLRX3O76003 335 aaKnown RBP17.41■□□□□ 0.38
C12orf49-201ENST00000261318 TAF4BQ92750 862 aa17.41■□□□□ 0.38
C12orf49-201ENST00000261318 NUTM1Q86Y26 1132 aa17.41■□□□□ 0.38
C12orf49-201ENST00000261318 BTBD11A6QL63 1104 aa17.41■□□□□ 0.38
C12orf49-201ENST00000261318 ZNF530Q6P9A1 599 aaPredicted RBP17.41■□□□□ 0.38
C12orf49-201ENST00000261318 GRIN2BQ13224 1484 aa17.41■□□□□ 0.38
C12orf49-201ENST00000261318 RTEL1-TNFRSF6BF6WH68 1400 aa17.4■□□□□ 0.38
C12orf49-201ENST00000261318 ATP2B2Q01814 1243 aa17.4■□□□□ 0.38
C12orf49-201ENST00000261318 C16orf45Q96MC5 204 aaPredicted RBP17.4■□□□□ 0.38
C12orf49-201ENST00000261318 CABP4P57796 275 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms