RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 PPFIBP1Q86W92 1011 aa14.31□□□□□ -0.12
COL8A1-201ENST00000261037 GRIN2AQ12879 1464 aa14.31□□□□□ -0.12
COL8A1-201ENST00000261037 CCDC192P0DO97 292 aa14.31□□□□□ -0.12
COL8A1-201ENST00000261037 ZNF692Q9BU19 519 aaPredicted RBP14.31□□□□□ -0.12
COL8A1-201ENST00000261037 PCF11O94913 1555 aaKnown RBP14.31□□□□□ -0.12
COL8A1-201ENST00000261037 IBSPP21815 317 aaPredicted RBP14.3□□□□□ -0.12
COL8A1-201ENST00000261037 ZC3H6P61129 1189 aaKnown RBP14.3□□□□□ -0.12
COL8A1-201ENST00000261037 CCDC184Q52MB2 194 aa14.3□□□□□ -0.12
COL8A1-201ENST00000261037 ZNHIT6Q9NWK9 470 aaKnown RBP14.3□□□□□ -0.12
COL8A1-201ENST00000261037 URB2Q14146 1524 aaKnown RBP14.3□□□□□ -0.12
COL8A1-201ENST00000261037 RDXP35241 583 aaKnown RBP14.3□□□□□ -0.12
COL8A1-201ENST00000261037 SF3B2Q13435 895 aaKnown RBP14.3□□□□□ -0.12
COL8A1-201ENST00000261037 CCP110O43303 1012 aa14.3□□□□□ -0.12
COL8A1-201ENST00000261037 THEMISQ8N1K5 641 aaPredicted RBP14.3□□□□□ -0.12
COL8A1-201ENST00000261037 JMYQ8N9B5 988 aa14.3□□□□□ -0.12
COL8A1-201ENST00000261037 DHX37Q8IY37 1157 aaKnown RBP14.3□□□□□ -0.12
COL8A1-201ENST00000261037 RAPGEF3O95398 923 aa14.3□□□□□ -0.12
COL8A1-201ENST00000261037 WDR63Q8IWG1 891 aa14.3□□□□□ -0.12
COL8A1-201ENST00000261037 SPATA32Q96LK8 384 aa14.3□□□□□ -0.12
COL8A1-201ENST00000261037 WDR33Q9C0J8 1336 aaKnown RBP14.29□□□□□ -0.12
COL8A1-201ENST00000261037 SMARCA5O60264 1052 aaPredicted RBP14.29□□□□□ -0.12
COL8A1-201ENST00000261037 ZSCAN25Q6NSZ9 544 aa14.29□□□□□ -0.12
COL8A1-201ENST00000261037 DDX11Q96FC9 970 aa14.29□□□□□ -0.12
COL8A1-201ENST00000261037 THUMPD2Q9BTF0 503 aaKnown RBP14.29□□□□□ -0.12
COL8A1-201ENST00000261037 BLOC1S2Q6QNY1 142 aa14.29□□□□□ -0.12
COL8A1-201ENST00000261037 BIVM-ERCC5R4GMW8 1640 aa14.29□□□□□ -0.12
COL8A1-201ENST00000261037 IDH1O75874 414 aaKnown RBP14.29□□□□□ -0.12
COL8A1-201ENST00000261037 USP5P45974 858 aa14.29□□□□□ -0.12
COL8A1-201ENST00000261037 PRDM11Q9NQV5 511 aa14.29□□□□□ -0.12
COL8A1-201ENST00000261037 MATR3P43243 847 aaKnown RBP eCLIP14.28□□□□□ -0.12
COL8A1-201ENST00000261037 PIP4K2AP48426 406 aaPredicted RBP14.28□□□□□ -0.12
COL8A1-201ENST00000261037 DCTN1Q14203 1278 aa14.28□□□□□ -0.12
COL8A1-201ENST00000261037 MCM10Q7L590 875 aa14.28□□□□□ -0.12
COL8A1-201ENST00000261037 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.28□□□□□ -0.12
COL8A1-201ENST00000261037 UBAC1Q9BSL1 405 aa14.28□□□□□ -0.12
COL8A1-201ENST00000261037 KRT85P78386 507 aa14.28□□□□□ -0.12
COL8A1-201ENST00000261037 STIM1Q13586 685 aa14.28□□□□□ -0.12
COL8A1-201ENST00000261037 CCDC181Q5TID7 509 aa14.28□□□□□ -0.12
COL8A1-201ENST00000261037 USHBP1Q8N6Y0 703 aa14.28□□□□□ -0.12
COL8A1-201ENST00000261037 LRP2BPQ9P2M1 347 aa14.28□□□□□ -0.12
COL8A1-201ENST00000261037 MPHOSPH10O00566 681 aaKnown RBP14.28□□□□□ -0.12
COL8A1-201ENST00000261037 DACH1Q9UI36 760 aa14.28□□□□□ -0.12
COL8A1-201ENST00000261037 NOL7Q9UMY1 257 aaKnown RBP14.28□□□□□ -0.12
COL8A1-201ENST00000261037 NSD3Q9BZ95 1437 aa14.28□□□□□ -0.12
COL8A1-201ENST00000261037 DCAF8L1A6NGE4 600 aa14.28□□□□□ -0.12
COL8A1-201ENST00000261037 NEFHP12036 1026 aa14.28□□□□□ -0.12
COL8A1-201ENST00000261037 TMEM57Q8N5G2 664 aa14.28□□□□□ -0.12
COL8A1-201ENST00000261037 CASTP20810 708 aaKnown RBP14.27□□□□□ -0.12
COL8A1-201ENST00000261037 FAM193AP78312 1265 aa14.27□□□□□ -0.13
COL8A1-201ENST00000261037 ANKRD62A6NC57 917 aa14.27□□□□□ -0.13
COL8A1-201ENST00000261037 EXOC6BQ9Y2D4 811 aa14.27□□□□□ -0.13
COL8A1-201ENST00000261037 CAMK4Q16566 473 aa14.26□□□□□ -0.13
COL8A1-201ENST00000261037 TSPYL1Q9H0U9 437 aa14.26□□□□□ -0.13
COL8A1-201ENST00000261037 ZNF76P36508 570 aa14.26□□□□□ -0.13
COL8A1-201ENST00000261037 GNAT3A8MTJ3 354 aa14.26□□□□□ -0.13
COL8A1-201ENST00000261037 CENPHQ9H3R5 247 aa14.26□□□□□ -0.13
COL8A1-201ENST00000261037 CEP126Q9P2H0 1117 aa14.26□□□□□ -0.13
COL8A1-201ENST00000261037 BACH2Q9BYV9 841 aa14.25□□□□□ -0.13
COL8A1-201ENST00000261037 IL27Q8NEV9 243 aa14.25□□□□□ -0.13
COL8A1-201ENST00000261037 GRPEL1Q9HAV7 217 aa14.25□□□□□ -0.13
COL8A1-201ENST00000261037 IGHMBP2P38935 993 aaKnown RBP14.25□□□□□ -0.13
COL8A1-201ENST00000261037 CWC15Q9P013 229 aaKnown RBP14.25□□□□□ -0.13
COL8A1-201ENST00000261037 ABCF2Q9UG63 623 aa14.25□□□□□ -0.13
COL8A1-201ENST00000261037 CT47B1P0C2W7 299 aaPredicted RBP14.24□□□□□ -0.13
COL8A1-201ENST00000261037 AIDAQ96BJ3 306 aa14.24□□□□□ -0.13
COL8A1-201ENST00000261037 ANKLE2Q86XL3 938 aa14.24□□□□□ -0.13
COL8A1-201ENST00000261037 ARHGEF11O15085 1522 aa14.24□□□□□ -0.13
COL8A1-201ENST00000261037 CCDC191Q8NCU4 936 aa14.24□□□□□ -0.13
COL8A1-201ENST00000261037 SKAP1Q86WV1 359 aa14.24□□□□□ -0.13
COL8A1-201ENST00000261037 PLCD4Q9BRC7 762 aa14.24□□□□□ -0.13
COL8A1-201ENST00000261037 CDKL5O76039 1030 aa14.24□□□□□ -0.13
COL8A1-201ENST00000261037 METTL24Q5JXM2 366 aa14.24□□□□□ -0.13
COL8A1-201ENST00000261037 MYD88Q99836 296 aa14.24□□□□□ -0.13
COL8A1-201ENST00000261037 ANKRD30BQ9BXX2 1392 aa14.23□□□□□ -0.13
COL8A1-201ENST00000261037 PTCD1O75127 700 aaKnown RBP14.23□□□□□ -0.13
COL8A1-201ENST00000261037 ERLIN2O94905 339 aa14.23□□□□□ -0.13
COL8A1-201ENST00000261037 NFE2L2Q16236 605 aa14.23□□□□□ -0.13
COL8A1-201ENST00000261037 WAPLQ7Z5K2 1190 aa14.23□□□□□ -0.13
COL8A1-201ENST00000261037 NUP62CLQ9H1M0 184 aa14.23□□□□□ -0.13
COL8A1-201ENST00000261037 PLB1Q6P1J6 1458 aa14.23□□□□□ -0.13
COL8A1-201ENST00000261037 CEP57L1Q8IYX8 460 aa14.23□□□□□ -0.13
COL8A1-201ENST00000261037 NUDT16Q96DE0 195 aaKnown RBP14.23□□□□□ -0.13
COL8A1-201ENST00000261037 KIF14Q15058 1648 aa14.23□□□□□ -0.13
COL8A1-201ENST00000261037 LEKR1Q6ZMV7 388 aa14.23□□□□□ -0.13
COL8A1-201ENST00000261037 CCDC83Q8IWF9 413 aa14.23□□□□□ -0.13
COL8A1-201ENST00000261037 CCDC141Q6ZP82 1450 aa14.22□□□□□ -0.13
COL8A1-201ENST00000261037 CBFA2T2O43439 604 aa14.22□□□□□ -0.13
COL8A1-201ENST00000261037 TMPOP42166 694 aaKnown RBP14.22□□□□□ -0.13
COL8A1-201ENST00000261037 ENOX2Q16206 610 aaKnown RBP14.22□□□□□ -0.13
COL8A1-201ENST00000261037 DUSP27Q5VZP5 1158 aa14.22□□□□□ -0.13
COL8A1-201ENST00000261037 IMMTQ16891 758 aaKnown RBP14.22□□□□□ -0.13
COL8A1-201ENST00000261037 SLC52A1Q9NWF4 448 aa14.22□□□□□ -0.13
COL8A1-201ENST00000261037 PRPF40BQ6NWY9 871 aaKnown RBP14.22□□□□□ -0.13
COL8A1-201ENST00000261037 GOLGA6L10A6NI86 522 aa14.22□□□□□ -0.13
COL8A1-201ENST00000261037 SEPT7Q16181 437 aaKnown RBP14.22□□□□□ -0.13
COL8A1-201ENST00000261037 CTNNA3Q9UI47 895 aa14.22□□□□□ -0.13
COL8A1-201ENST00000261037 FERMT3Q86UX7 667 aa14.22□□□□□ -0.13
COL8A1-201ENST00000261037 TAX1BP1Q86VP1 789 aa14.21□□□□□ -0.13
COL8A1-201ENST00000261037 CCDC112Q8NEF3 446 aa14.21□□□□□ -0.13
COL8A1-201ENST00000261037 MINDY4BA8MYZ0 360 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms