RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 EIF4A2Q14240 407 aaKnown RBP13.49□□□□□ -0.25
CHRNA1-201ENST00000261007 HSCBQ8IWL3 235 aa13.49□□□□□ -0.25
CHRNA1-201ENST00000261007 VSIG10Q8N0Z9 540 aa13.49□□□□□ -0.25
CHRNA1-201ENST00000261007 CFAP44Q96MT7 982 aa13.49□□□□□ -0.25
CHRNA1-201ENST00000261007 FLT4P35916 1363 aa13.48□□□□□ -0.25
CHRNA1-201ENST00000261007 SNX21Q969T3 373 aa13.48□□□□□ -0.25
CHRNA1-201ENST00000261007 ZMYND15Q9H091 742 aa13.48□□□□□ -0.25
CHRNA1-201ENST00000261007 ADAMTSL3P82987 1691 aa13.48□□□□□ -0.25
CHRNA1-201ENST00000261007 SETD1BQ9UPS6 1966 aaKnown RBP13.47□□□□□ -0.25
CHRNA1-201ENST00000261007 NOB1Q9ULX3 412 aaKnown RBP13.47□□□□□ -0.25
CHRNA1-201ENST00000261007 CHD2O14647 1828 aaKnown RBP13.47□□□□□ -0.25
CHRNA1-201ENST00000261007 HDAC1Q13547 482 aaPredicted RBP13.47□□□□□ -0.25
CHRNA1-201ENST00000261007 TRIM44Q96DX7 344 aaPredicted RBP13.47□□□□□ -0.25
CHRNA1-201ENST00000261007 PEAK1Q9H792 1746 aa13.47□□□□□ -0.25
CHRNA1-201ENST00000261007 VAMP4O75379 141 aa13.45□□□□□ -0.26
CHRNA1-201ENST00000261007 KCNA6P17658 529 aa13.45□□□□□ -0.26
CHRNA1-201ENST00000261007 RBM25P49756 843 aaKnown RBP13.45□□□□□ -0.26
CHRNA1-201ENST00000261007 ITPRIPQ8IWB1 547 aa13.45□□□□□ -0.26
CHRNA1-201ENST00000261007 SMC5Q8IY18 1101 aa13.45□□□□□ -0.26
CHRNA1-201ENST00000261007 ARXQ96QS3 562 aa13.45□□□□□ -0.26
CHRNA1-201ENST00000261007 RGPD8O14715 1765 aaPredicted RBP13.45□□□□□ -0.26
CHRNA1-201ENST00000261007 PIK3C2AO00443 1686 aa13.45□□□□□ -0.26
CHRNA1-201ENST00000261007 NUTM2FA1L443 756 aa13.45□□□□□ -0.26
CHRNA1-201ENST00000261007 SULT6B1Q6IMI4 303 aa13.45□□□□□ -0.26
CHRNA1-201ENST00000261007 SPRYD3Q8NCJ5 442 aa13.45□□□□□ -0.26
CHRNA1-201ENST00000261007 GBP4Q96PP9 640 aa13.45□□□□□ -0.26
CHRNA1-201ENST00000261007 MBIPQ9NS73 344 aa13.44□□□□□ -0.26
CHRNA1-201ENST00000261007 TNNQ9UQP3 1299 aa13.44□□□□□ -0.26
CHRNA1-201ENST00000261007 MFAP1P55081 439 aaKnown RBP13.43□□□□□ -0.26
CHRNA1-201ENST00000261007 MAP3K19Q56UN5 1328 aa13.43□□□□□ -0.26
CHRNA1-201ENST00000261007 TWISTNBQ3B726 338 aaPredicted RBP13.43□□□□□ -0.26
CHRNA1-201ENST00000261007 MRPL50Q8N5N7 158 aaKnown RBP13.43□□□□□ -0.26
CHRNA1-201ENST00000261007 API5Q9BZZ5 524 aaKnown RBP13.43□□□□□ -0.26
CHRNA1-201ENST00000261007 PDCL3Q9H2J4 239 aa13.43□□□□□ -0.26
CHRNA1-201ENST00000261007 KDRP35968 1356 aa13.43□□□□□ -0.26
CHRNA1-201ENST00000261007 ERBB4Q15303 1308 aa13.42□□□□□ -0.26
CHRNA1-201ENST00000261007 TERF1P54274 439 aa13.42□□□□□ -0.26
CHRNA1-201ENST00000261007 TMEM57Q8N5G2 664 aa13.42□□□□□ -0.26
CHRNA1-201ENST00000261007 KIAA0232Q92628 1395 aa13.42□□□□□ -0.26
CHRNA1-201ENST00000261007 RTL1A6NKG5 1358 aa13.42□□□□□ -0.26
CHRNA1-201ENST00000261007 AMPHP49418 695 aa13.41□□□□□ -0.26
CHRNA1-201ENST00000261007 CCDC173Q0VFZ6 552 aa13.41□□□□□ -0.26
CHRNA1-201ENST00000261007 RAB3GAP1Q15042 981 aa13.41□□□□□ -0.26
CHRNA1-201ENST00000261007 ZBTB40Q9NUA8 1239 aa13.41□□□□□ -0.26
CHRNA1-201ENST00000261007 IBTKQ9P2D0 1353 aaPredicted RBP13.41□□□□□ -0.26
CHRNA1-201ENST00000261007 HSP90AB2PQ58FF8 381 aa13.41□□□□□ -0.26
CHRNA1-201ENST00000261007 GAS2L2Q8NHY3 880 aa13.41□□□□□ -0.26
CHRNA1-201ENST00000261007 TNPO1Q92973 898 aaKnown RBP13.41□□□□□ -0.26
CHRNA1-201ENST00000261007 PPP1R9BQ96SB3 815 aa13.41□□□□□ -0.26
CHRNA1-201ENST00000261007 ADGRL3Q9HAR2 1447 aa13.41□□□□□ -0.26
CHRNA1-201ENST00000261007 IGSF1Q8N6C5 1336 aa13.41□□□□□ -0.26
CHRNA1-201ENST00000261007 HTATSF1O43719 755 aaKnown RBP13.4□□□□□ -0.26
CHRNA1-201ENST00000261007 THUMPD2Q9BTF0 503 aaKnown RBP13.4□□□□□ -0.26
CHRNA1-201ENST00000261007 CHL1O00533 1208 aa13.4□□□□□ -0.27
CHRNA1-201ENST00000261007 NLRP6P59044 892 aa13.4□□□□□ -0.27
CHRNA1-201ENST00000261007 ABCC4O15439 1325 aa13.39□□□□□ -0.27
CHRNA1-201ENST00000261007 NPHP4O75161 1426 aaPredicted RBP13.39□□□□□ -0.27
CHRNA1-201ENST00000261007 AEBP1Q8IUX7 1158 aa13.39□□□□□ -0.27
CHRNA1-201ENST00000261007 CLEC17AQ6ZS10 378 aa13.38□□□□□ -0.27
CHRNA1-201ENST00000261007 GAS2L3Q86XJ1 694 aa13.38□□□□□ -0.27
CHRNA1-201ENST00000261007 RTF1Q92541 710 aaKnown RBP13.38□□□□□ -0.27
CHRNA1-201ENST00000261007 PHF8Q9UPP1 1060 aa13.38□□□□□ -0.27
CHRNA1-201ENST00000261007 MARF1Q9Y4F3 1742 aaKnown RBP13.38□□□□□ -0.27
CHRNA1-201ENST00000261007 TSPYL6Q8N831 410 aa13.37□□□□□ -0.27
CHRNA1-201ENST00000261007 NWD1Q149M9 1564 aa13.37□□□□□ -0.27
CHRNA1-201ENST00000261007 FAM83GA6ND36 823 aa13.36□□□□□ -0.27
CHRNA1-201ENST00000261007 OFD1O75665 1012 aa13.36□□□□□ -0.27
CHRNA1-201ENST00000261007 HSP90AB1P08238 724 aaKnown RBP13.36□□□□□ -0.27
CHRNA1-201ENST00000261007 ZSCAN30Q86W11 494 aa13.36□□□□□ -0.27
CHRNA1-201ENST00000261007 SOS1Q07889 1333 aaPredicted RBP13.36□□□□□ -0.27
CHRNA1-201ENST00000261007 CRB1P82279 1406 aa13.36□□□□□ -0.27
CHRNA1-201ENST00000261007 HS1BP3Q53T59 392 aa13.36□□□□□ -0.27
CHRNA1-201ENST00000261007 ABTB2Q8N961 1025 aa13.36□□□□□ -0.27
CHRNA1-201ENST00000261007 C8orf58Q8NAV2 365 aa13.36□□□□□ -0.27
CHRNA1-201ENST00000261007 ANP32BQ92688 251 aaKnown RBP13.36□□□□□ -0.27
CHRNA1-201ENST00000261007 GCC1Q96CN9 775 aa13.36□□□□□ -0.27
CHRNA1-201ENST00000261007 PTPRCP08575 1304 aa13.36□□□□□ -0.27
CHRNA1-201ENST00000261007 ZBTB7BO15156 539 aaPredicted RBP13.35□□□□□ -0.27
CHRNA1-201ENST00000261007 HOXC9P31274 260 aa13.35□□□□□ -0.27
CHRNA1-201ENST00000261007 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.35□□□□□ -0.27
CHRNA1-201ENST00000261007 EYA1Q99502 592 aa13.35□□□□□ -0.27
CHRNA1-201ENST00000261007 BABAM1Q9NWV8 329 aa13.35□□□□□ -0.27
CHRNA1-201ENST00000261007 GOLGA6L22H0YM25 854 aa13.34□□□□□ -0.27
CHRNA1-201ENST00000261007 NUCB1Q02818 461 aa13.34□□□□□ -0.27
CHRNA1-201ENST00000261007 KCNH5Q8NCM2 988 aa13.34□□□□□ -0.27
CHRNA1-201ENST00000261007 MAP7D2Q96T17 732 aa13.34□□□□□ -0.27
CHRNA1-201ENST00000261007 PHRF1Q9P1Y6 1649 aaKnown RBP13.34□□□□□ -0.27
CHRNA1-201ENST00000261007 SOX12O15370 315 aa13.34□□□□□ -0.27
CHRNA1-201ENST00000261007 DCTN1Q14203 1278 aa13.34□□□□□ -0.27
CHRNA1-201ENST00000261007 KIAA1211Q6ZU35 1233 aa13.34□□□□□ -0.27
CHRNA1-201ENST00000261007 LRRC37A3O60309 1634 aa13.34□□□□□ -0.27
CHRNA1-201ENST00000261007 NASPP49321 788 aaPredicted RBP13.33□□□□□ -0.28
CHRNA1-201ENST00000261007 BMP2KLQ5H9B9 411 aa13.33□□□□□ -0.28
CHRNA1-201ENST00000261007 MTHFSDQ2M296 383 aaKnown RBP13.32□□□□□ -0.28
CHRNA1-201ENST00000261007 KLHL40Q2TBA0 621 aa13.32□□□□□ -0.28
CHRNA1-201ENST00000261007 INTS3Q68E01 1043 aaKnown RBP13.32□□□□□ -0.28
CHRNA1-201ENST00000261007 K7ELQ4 463 aaPredicted RBP13.32□□□□□ -0.28
CHRNA1-201ENST00000261007 ELL2O00472 640 aaPredicted RBP13.32□□□□□ -0.28
CHRNA1-201ENST00000261007 MCM10Q7L590 875 aa13.32□□□□□ -0.28
CHRNA1-201ENST00000261007 KIF1AQ12756 1690 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms