RNA–Protein interactions for RNA: ENST00000260197.11

SORL1-201, Transcript of sortilin related receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SORL1, Length 10,904 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-201ENST00000260197 PLEKHO1Q53GL0 409 aaPredicted RBP13.71□□□□□ -0.21
SORL1-201ENST00000260197 ZNF428Q96B54 188 aa13.71□□□□□ -0.21
SORL1-201ENST00000260197 TMEM132AQ24JP5 1023 aa13.71□□□□□ -0.22
SORL1-201ENST00000260197 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.71□□□□□ -0.224e-8■□□□□ 10.6
SORL1-201ENST00000260197 ESPNB1AK53 854 aa13.71□□□□□ -0.22
SORL1-201ENST00000260197 MAP9Q49MG5 647 aa13.7□□□□□ -0.22
SORL1-201ENST00000260197 CASTP20810 708 aaKnown RBP13.7□□□□□ -0.22
SORL1-201ENST00000260197 CDCA7LQ96GN5 454 aa13.7□□□□□ -0.22
SORL1-201ENST00000260197 NUP62CLQ9H1M0 184 aa13.7□□□□□ -0.22
SORL1-201ENST00000260197 TSR2Q969E8 191 aaKnown RBP13.7□□□□□ -0.22
SORL1-201ENST00000260197 HDGFL1Q5TGJ6 251 aa13.7□□□□□ -0.22
SORL1-201ENST00000260197 PRG4Q92954 1404 aaPredicted RBP13.7□□□□□ -0.22
SORL1-201ENST00000260197 PPP6R1Q9UPN7 881 aa13.7□□□□□ -0.22
SORL1-201ENST00000260197 WASF1Q92558 559 aa13.7□□□□□ -0.22
SORL1-201ENST00000260197 MAP3K11Q16584 847 aa13.7□□□□□ -0.22
SORL1-201ENST00000260197 WWC2Q6AWC2 1192 aa13.69□□□□□ -0.22
SORL1-201ENST00000260197 KRI1Q8N9T8 703 aaKnown RBP13.69□□□□□ -0.22
SORL1-201ENST00000260197 ZSCAN31Q96LW9 406 aaPredicted RBP13.69□□□□□ -0.22
SORL1-201ENST00000260197 RBM10P98175 930 aaKnown RBP13.69□□□□□ -0.22
SORL1-201ENST00000260197 ZSCAN25Q6NSZ9 544 aa13.69□□□□□ -0.22
SORL1-201ENST00000260197 AACSQ86V21 672 aa13.69□□□□□ -0.22
SORL1-201ENST00000260197 RALGAPBQ86X10 1494 aa13.69□□□□□ -0.22
SORL1-201ENST00000260197 NOL7Q9UMY1 257 aaKnown RBP13.68□□□□□ -0.22
SORL1-201ENST00000260197 SNAPC4Q5SXM2 1469 aa13.68□□□□□ -0.22
SORL1-201ENST00000260197 PRXQ9BXM0 1461 aa13.68□□□□□ -0.22
SORL1-201ENST00000260197 NUTM2GQ5VZR2 741 aa13.68□□□□□ -0.22
SORL1-201ENST00000260197 MCM3P25205 808 aa13.68□□□□□ -0.22
SORL1-201ENST00000260197 NLRP6P59044 892 aa13.68□□□□□ -0.22
SORL1-201ENST00000260197 ANKRD12Q6UB98 2062 aa13.68□□□□□ -0.22
SORL1-201ENST00000260197 ATP2B1P20020 1258 aa13.68□□□□□ -0.22
SORL1-201ENST00000260197 SAMD1Q6SPF0 538 aaPredicted RBP13.68□□□□□ -0.22
SORL1-201ENST00000260197 PNISRQ8TF01 805 aaKnown RBP13.68□□□□□ -0.22
SORL1-201ENST00000260197 SMTNL1A8MU46 457 aa13.68□□□□□ -0.22
SORL1-201ENST00000260197 CNNM1Q9NRU3 951 aa13.68□□□□□ -0.22
SORL1-201ENST00000260197 SLC4A2P04920 1241 aa13.68□□□□□ -0.22
SORL1-201ENST00000260197 KIAA1328Q86T90 577 aa13.68□□□□□ -0.22
SORL1-201ENST00000260197 PDCL2Q8N4E4 241 aa13.68□□□□□ -0.22
SORL1-201ENST00000260197 UPF3BQ9BZI7 483 aaKnown RBP13.68□□□□□ -0.22
SORL1-201ENST00000260197 HSP90AB3PQ58FF7 597 aa13.67□□□□□ -0.22
SORL1-201ENST00000260197 CTNNA3Q9UI47 895 aa13.67□□□□□ -0.22
SORL1-201ENST00000260197 ASXL1Q8IXJ9 1541 aa13.67□□□□□ -0.22
SORL1-201ENST00000260197 SYCE3A1L190 88 aa13.67□□□□□ -0.22
SORL1-201ENST00000260197 ZSCAN30Q86W11 494 aa13.67□□□□□ -0.22
SORL1-201ENST00000260197 SLC26A8Q96RN1 970 aa13.67□□□□□ -0.22
SORL1-201ENST00000260197 ABCC11Q96J66 1382 aa13.67□□□□□ -0.22
SORL1-201ENST00000260197 MAGI1Q96QZ7 1491 aaPredicted RBP13.67□□□□□ -0.22
SORL1-201ENST00000260197 CCDC183Q5T5S1 534 aa13.67□□□□□ -0.22
SORL1-201ENST00000260197 ZNF397Q8NF99 534 aaPredicted RBP13.67□□□□□ -0.22
SORL1-201ENST00000260197 PDRG1Q9NUG6 133 aa13.67□□□□□ -0.22
SORL1-201ENST00000260197 SFPQP23246 707 aaKnown RBP eCLIP13.67□□□□□ -0.22
SORL1-201ENST00000260197 BLOC1S2Q6QNY1 142 aa13.67□□□□□ -0.22
SORL1-201ENST00000260197 ARHGEF11O15085 1522 aa13.67□□□□□ -0.22
SORL1-201ENST00000260197 STK3Q13188 491 aa13.67□□□□□ -0.22
SORL1-201ENST00000260197 EXOSC9Q06265 439 aaKnown RBP13.67□□□□□ -0.22
SORL1-201ENST00000260197 CEP131Q9UPN4 1083 aa13.67□□□□□ -0.22
SORL1-201ENST00000260197 EPB41L2O43491 1005 aaKnown RBP13.66□□□□□ -0.22
SORL1-201ENST00000260197 RTEL1-TNFRSF6BF6WH68 1400 aa13.66□□□□□ -0.22
SORL1-201ENST00000260197 NEFHP12036 1026 aa13.66□□□□□ -0.22
SORL1-201ENST00000260197 MCM4P33991 863 aa13.66□□□□□ -0.22
SORL1-201ENST00000260197 TMEM132EQ6IEE7 984 aa13.66□□□□□ -0.22
SORL1-201ENST00000260197 MTMR7Q9Y216 660 aa13.66□□□□□ -0.22
SORL1-201ENST00000260197 ARHGAP29Q52LW3 1261 aa13.66□□□□□ -0.22
SORL1-201ENST00000260197 CCDC148Q8NFR7 591 aa13.66□□□□□ -0.22
SORL1-201ENST00000260197 IL27Q8NEV9 243 aa13.66□□□□□ -0.22
SORL1-201ENST00000260197 SKIDA1Q1XH10 827 aa13.66□□□□□ -0.22
SORL1-201ENST00000260197 PRAM1Q96QH2 718 aa13.66□□□□□ -0.22
SORL1-201ENST00000260197 DESP17661 470 aa13.65□□□□□ -0.22
SORL1-201ENST00000260197 U3KPZ7 1027 aaPredicted RBP13.65□□□□□ -0.22
SORL1-201ENST00000260197 LRRFIP2Q9Y608 721 aaKnown RBP13.65□□□□□ -0.22
SORL1-201ENST00000260197 FAM193AP78312 1265 aa13.65□□□□□ -0.22
SORL1-201ENST00000260197 UBAC1Q9BSL1 405 aa13.65□□□□□ -0.22
SORL1-201ENST00000260197 BCAR3O75815 825 aa13.65□□□□□ -0.22
SORL1-201ENST00000260197 ABCA10Q8WWZ4 1543 aa13.64□□□□□ -0.23
SORL1-201ENST00000260197 SH2B1Q9NRF2 756 aaPredicted RBP13.64□□□□□ -0.23
SORL1-201ENST00000260197 NAIPQ13075 1403 aa13.64□□□□□ -0.23
SORL1-201ENST00000260197 KDM4AO75164 1064 aa13.64□□□□□ -0.23
SORL1-201ENST00000260197 SIL1Q9H173 461 aa13.64□□□□□ -0.23
SORL1-201ENST00000260197 FAM177A1Q8N128 213 aaPredicted RBP13.64□□□□□ -0.23
SORL1-201ENST00000260197 MPHOSPH8Q99549 860 aa13.64□□□□□ -0.23
SORL1-201ENST00000260197 PPP1R12BO60237 982 aaPredicted RBP13.64□□□□□ -0.23
SORL1-201ENST00000260197 IMMTQ16891 758 aaKnown RBP13.64□□□□□ -0.23
SORL1-201ENST00000260197 CCDC57Q2TAC2 916 aa13.64□□□□□ -0.23
SORL1-201ENST00000260197 JAKMIP1Q96N16 626 aaKnown RBP13.64□□□□□ -0.23
SORL1-201ENST00000260197 CCDC102AQ96A19 550 aa13.63□□□□□ -0.23
SORL1-201ENST00000260197 JAKMIP3Q5VZ66 844 aa13.63□□□□□ -0.23
SORL1-201ENST00000260197 KIF18AQ8NI77 898 aa13.63□□□□□ -0.23
SORL1-201ENST00000260197 CWC27Q6UX04 472 aaKnown RBP13.63□□□□□ -0.23
SORL1-201ENST00000260197 TANGO6Q9C0B7 1094 aa13.63□□□□□ -0.23
SORL1-201ENST00000260197 ZSCAN12O43309 604 aa13.63□□□□□ -0.23
SORL1-201ENST00000260197 NUMA1Q14980 2115 aa13.63□□□□□ -0.23
SORL1-201ENST00000260197 DHX29Q7Z478 1369 aaKnown RBP13.63□□□□□ -0.23
SORL1-201ENST00000260197 TDO2P48775 406 aa13.63□□□□□ -0.23
SORL1-201ENST00000260197 SRGAP3O43295 1099 aa13.62□□□□□ -0.23
SORL1-201ENST00000260197 SCAND2PQ9GZW5 306 aaPredicted RBP13.62□□□□□ -0.23
SORL1-201ENST00000260197 OSCARQ8IYS5 282 aa13.62□□□□□ -0.23
SORL1-201ENST00000260197 GBP3Q9H0R5 595 aa13.62□□□□□ -0.23
SORL1-201ENST00000260197 CDK19Q9BWU1 502 aa13.62□□□□□ -0.23
SORL1-201ENST00000260197 LRPPRCP42704 1394 aaKnown RBP13.62□□□□□ -0.23
SORL1-201ENST00000260197 MYH7P12883 1935 aa13.62□□□□□ -0.23
SORL1-201ENST00000260197 DDX11Q96FC9 970 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 118.1 ms