RNA–Protein interactions for RNA: ENST00000259951.11

HLA-F-216, Transcript of major histocompatibility complex, class I, F, humanhuman

APPRIS P4 BASIC

Gene HLA-F, Length 1,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-216ENST00000259951 CT47B1P0C2W7 299 aaPredicted RBP21.73■■□□□ 1.07
HLA-F-216ENST00000259951 FKBP8Q14318 412 aa21.72■■□□□ 1.07
HLA-F-216ENST00000259951 RAPGEF4Q8WZA2 1011 aa21.72■■□□□ 1.07
HLA-F-216ENST00000259951 MAP3K5Q99683 1374 aa21.72■■□□□ 1.07
HLA-F-216ENST00000259951 FAM83GA6ND36 823 aa21.71■■□□□ 1.07
HLA-F-216ENST00000259951 CFAP44Q96MT7 982 aa21.7■■□□□ 1.06
HLA-F-216ENST00000259951 THUMPD2Q9BTF0 503 aaKnown RBP21.7■■□□□ 1.06
HLA-F-216ENST00000259951 TATP17735 454 aaPredicted RBP21.69■■□□□ 1.06
HLA-F-216ENST00000259951 EVA1CP58658 441 aa21.69■■□□□ 1.06
HLA-F-216ENST00000259951 LAS1LQ9Y4W2 734 aaKnown RBP21.69■■□□□ 1.06
HLA-F-216ENST00000259951 ZNF853P0CG23 659 aa21.69■■□□□ 1.06
HLA-F-216ENST00000259951 DCTN1Q14203 1278 aa21.69■■□□□ 1.06
HLA-F-216ENST00000259951 ILDR2Q71H61 639 aa21.69■■□□□ 1.06
HLA-F-216ENST00000259951 TSR2Q969E8 191 aaKnown RBP21.69■■□□□ 1.06
HLA-F-216ENST00000259951 RRP1P56182 461 aaKnown RBP21.68■■□□□ 1.06
HLA-F-216ENST00000259951 ERICH6BQ5W0A0 696 aa21.68■■□□□ 1.06
HLA-F-216ENST00000259951 TOM1L2Q6ZVM7 507 aa21.68■■□□□ 1.06
HLA-F-216ENST00000259951 MCM10Q7L590 875 aa21.68■■□□□ 1.06
HLA-F-216ENST00000259951 AKAP4Q5JQC9 854 aa21.67■■□□□ 1.06
HLA-F-216ENST00000259951 ZNF530Q6P9A1 599 aaPredicted RBP21.67■■□□□ 1.06
HLA-F-216ENST00000259951 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.67■■□□□ 1.06
HLA-F-216ENST00000259951 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.67■■□□□ 1.06
HLA-F-216ENST00000259951 LRRC37A3O60309 1634 aa21.67■■□□□ 1.06
HLA-F-216ENST00000259951 PARP4Q9UKK3 1724 aaKnown RBP21.67■■□□□ 1.06
HLA-F-216ENST00000259951 C1orf141Q5JVX7 400 aa21.66■■□□□ 1.06
HLA-F-216ENST00000259951 CARD10Q9BWT7 1032 aa21.66■■□□□ 1.06
HLA-F-216ENST00000259951 JCADQ9P266 1359 aa21.66■■□□□ 1.06
HLA-F-216ENST00000259951 SPG7Q9UQ90 795 aa21.66■■□□□ 1.06
HLA-F-216ENST00000259951 CRB1P82279 1406 aa21.65■■□□□ 1.06
HLA-F-216ENST00000259951 EXOSC9Q06265 439 aaKnown RBP21.65■■□□□ 1.06
HLA-F-216ENST00000259951 STRN4Q9NRL3 753 aa21.64■■□□□ 1.05
HLA-F-216ENST00000259951 BTG4Q9NY30 223 aa21.64■■□□□ 1.05
HLA-F-216ENST00000259951 PKD1L3Q7Z443 1732 aa21.64■■□□□ 1.05
HLA-F-216ENST00000259951 VIRMAQ69YN4 1812 aaKnown RBP21.64■■□□□ 1.05
HLA-F-216ENST00000259951 PLCH1Q4KWH8 1693 aa21.63■■□□□ 1.05
HLA-F-216ENST00000259951 CHL1O00533 1208 aa21.63■■□□□ 1.05
HLA-F-216ENST00000259951 MBIPQ9NS73 344 aa21.63■■□□□ 1.05
HLA-F-216ENST00000259951 ZNF428Q96B54 188 aa21.62■■□□□ 1.05
HLA-F-216ENST00000259951 BABAM1Q9NWV8 329 aa21.62■■□□□ 1.05
HLA-F-216ENST00000259951 OVOS2A0A0G2JMS6 1433 aa21.62■■□□□ 1.05
HLA-F-216ENST00000259951 MEGF6O75095 1541 aa21.62■■□□□ 1.05
HLA-F-216ENST00000259951 LARP1Q6PKG0 1096 aaKnown RBP21.61■■□□□ 1.05
HLA-F-216ENST00000259951 NWD2Q9ULI1 1742 aa21.6■■□□□ 1.05
HLA-F-216ENST00000259951 CEMIPQ8WUJ3 1361 aa21.6■■□□□ 1.05
HLA-F-216ENST00000259951 RARSP54136 660 aaKnown RBP21.6■■□□□ 1.05
HLA-F-216ENST00000259951 IRX6P78412 446 aaPredicted RBP21.6■■□□□ 1.05
HLA-F-216ENST00000259951 IL17REQ8NFR9 667 aa21.6■■□□□ 1.05
HLA-F-216ENST00000259951 NUTM2BA6NNL0 878 aaPredicted RBP21.59■■□□□ 1.05
HLA-F-216ENST00000259951 NUTM2EB1AL46 878 aaPredicted RBP21.59■■□□□ 1.05
HLA-F-216ENST00000259951 ADAMTS2O95450 1211 aa21.59■■□□□ 1.05
HLA-F-216ENST00000259951 NUTM2AQ8IVF1 878 aaPredicted RBP21.59■■□□□ 1.05
HLA-F-216ENST00000259951 SPATA31A6Q5VVP1 1343 aa21.58■■□□□ 1.04
HLA-F-216ENST00000259951 IL2RBP14784 551 aa21.58■■□□□ 1.04
HLA-F-216ENST00000259951 TAF7Q15545 349 aaPredicted RBP21.58■■□□□ 1.04
HLA-F-216ENST00000259951 TSPYL4Q9UJ04 414 aa21.58■■□□□ 1.04
HLA-F-216ENST00000259951 ADAMTS7Q9UKP4 1686 aa21.57■■□□□ 1.04
HLA-F-216ENST00000259951 IFNL2Q8IZJ0 200 aa21.57■■□□□ 1.04
HLA-F-216ENST00000259951 NRAPQ86VF7 1730 aa21.56■■□□□ 1.04
HLA-F-216ENST00000259951 BCAR3O75815 825 aa21.56■■□□□ 1.04
HLA-F-216ENST00000259951 HSP90AB1P08238 724 aaKnown RBP21.56■■□□□ 1.04
HLA-F-216ENST00000259951 SCN11AQ9UI33 1791 aa21.56■■□□□ 1.04
HLA-F-216ENST00000259951 RNMTO43148 476 aaKnown RBP21.55■■□□□ 1.04
HLA-F-216ENST00000259951 TEFQ10587 303 aa21.55■■□□□ 1.04
HLA-F-216ENST00000259951 ALDH1L2Q3SY69 923 aa21.55■■□□□ 1.04
HLA-F-216ENST00000259951 PHKG2P15735 406 aa21.55■■□□□ 1.04
HLA-F-216ENST00000259951 TWISTNBQ3B726 338 aaPredicted RBP21.54■■□□□ 1.04
HLA-F-216ENST00000259951 MPRIPQ6WCQ1 1025 aa21.54■■□□□ 1.04
HLA-F-216ENST00000259951 ZCRB1Q8TBF4 217 aaKnown RBP21.54■■□□□ 1.04
HLA-F-216ENST00000259951 PCDH11XQ9BZA7 1347 aa21.53■■□□□ 1.04
HLA-F-216ENST00000259951 PCDH11YQ9BZA8 1340 aa21.53■■□□□ 1.04
HLA-F-216ENST00000259951 PLIN1O60240 522 aa21.53■■□□□ 1.04
HLA-F-216ENST00000259951 VAMP4O75379 141 aa21.53■■□□□ 1.04
HLA-F-216ENST00000259951 CANXP27824 592 aaKnown RBP21.53■■□□□ 1.04
HLA-F-216ENST00000259951 LGR6Q9HBX8 967 aa21.53■■□□□ 1.04
HLA-F-216ENST00000259951 SMC4Q9NTJ3 1288 aa21.52■■□□□ 1.04
HLA-F-216ENST00000259951 SIPA1L3O60292 1781 aaPredicted RBP21.52■■□□□ 1.04
HLA-F-216ENST00000259951 SLIT2O94813 1529 aa21.52■■□□□ 1.03
HLA-F-216ENST00000259951 DCAF5Q96JK2 942 aa21.51■■□□□ 1.03
HLA-F-216ENST00000259951 KDM3BQ7LBC6 1761 aa21.51■■□□□ 1.03
HLA-F-216ENST00000259951 SOS1Q07889 1333 aaPredicted RBP21.51■■□□□ 1.03
HLA-F-216ENST00000259951 WNK3Q9BYP7 1800 aa21.51■■□□□ 1.03
HLA-F-216ENST00000259951 C8orf58Q8NAV2 365 aa21.51■■□□□ 1.03
HLA-F-216ENST00000259951 SSH1Q8WYL5 1049 aa21.5■■□□□ 1.03
HLA-F-216ENST00000259951 MIS18AQ9NYP9 233 aa21.5■■□□□ 1.03
HLA-F-216ENST00000259951 USP35Q9P2H5 1018 aa21.5■■□□□ 1.03
HLA-F-216ENST00000259951 RGS17Q9UGC6 210 aaPredicted RBP21.5■■□□□ 1.03
HLA-F-216ENST00000259951 CYP27B1O15528 508 aa21.49■■□□□ 1.03
HLA-F-216ENST00000259951 PDE3AQ14432 1141 aa21.49■■□□□ 1.03
HLA-F-216ENST00000259951 TSPYL6Q8N831 410 aa21.49■■□□□ 1.03
HLA-F-216ENST00000259951 CDCA7Q9BWT1 371 aaPredicted RBP21.49■■□□□ 1.03
HLA-F-216ENST00000259951 PPP4R2Q9NY27 417 aa21.49■■□□□ 1.03
HLA-F-216ENST00000259951 THRAP3Q9Y2W1 955 aaKnown RBP21.49■■□□□ 1.03
HLA-F-216ENST00000259951 KIF16BQ96L93 1317 aa21.49■■□□□ 1.03
HLA-F-216ENST00000259951 MS4A1P11836 297 aa21.48■■□□□ 1.03
HLA-F-216ENST00000259951 BRPF1P55201 1214 aaPredicted RBP21.48■■□□□ 1.03
HLA-F-216ENST00000259951 BCL2L13Q9BXK5 485 aa21.48■■□□□ 1.03
HLA-F-216ENST00000259951 SHANK3Q9BYB0 1731 aa21.48■■□□□ 1.03
HLA-F-216ENST00000259951 ELL2O00472 640 aaPredicted RBP21.47■■□□□ 1.03
HLA-F-216ENST00000259951 FRAT1Q92837 279 aaPredicted RBP21.47■■□□□ 1.03
HLA-F-216ENST00000259951 DISP2A7MBM2 1401 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms