RNA–Protein interactions for RNA: ENST00000259008.6

BRIP1-201, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRIP1, Length 6,048 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-201ENST00000259008 CFAP65Q6ZU64 1925 aaKnown RBP7.71□□□□□ -1.18
BRIP1-201ENST00000259008 BAG6P46379 1132 aa7.71□□□□□ -1.18
BRIP1-201ENST00000259008 CNTROBQ8N137 903 aa7.71□□□□□ -1.18
BRIP1-201ENST00000259008 CRACR2BQ8N4Y2 399 aaPredicted RBP7.71□□□□□ -1.18
BRIP1-201ENST00000259008 QTRT2Q9H974 415 aaKnown RBP7.71□□□□□ -1.18
BRIP1-201ENST00000259008 DISP1Q96F81 1524 aa7.71□□□□□ -1.18
BRIP1-201ENST00000259008 NRDCO43847 1150 aa7.71□□□□□ -1.18
BRIP1-201ENST00000259008 NINLQ9Y2I6 1382 aa7.71□□□□□ -1.18
BRIP1-201ENST00000259008 CFAP74Q9C0B2 1584 aa7.71□□□□□ -1.18
BRIP1-201ENST00000259008 SLC39A6Q13433 755 aa7.71□□□□□ -1.18
BRIP1-201ENST00000259008 TPD52L1Q16890 204 aaPredicted RBP7.71□□□□□ -1.18
BRIP1-201ENST00000259008 RBM26Q5T8P6 1007 aaKnown RBP7.71□□□□□ -1.18
BRIP1-201ENST00000259008 JARID2Q92833 1246 aaPredicted RBP7.71□□□□□ -1.18
BRIP1-201ENST00000259008 CDCA7LQ96GN5 454 aa7.71□□□□□ -1.18
BRIP1-201ENST00000259008 RTCBQ9Y3I0 505 aaKnown RBP7.71□□□□□ -1.18
BRIP1-201ENST00000259008 TTC21BQ7Z4L5 1316 aa7.7□□□□□ -1.18
BRIP1-201ENST00000259008 KDM6BO15054 1643 aa7.7□□□□□ -1.18
BRIP1-201ENST00000259008 GNPATO15228 680 aa7.7□□□□□ -1.18
BRIP1-201ENST00000259008 YEATS2Q9ULM3 1422 aa7.7□□□□□ -1.18
BRIP1-201ENST00000259008 ATP5J2-PTCD1G3V325 749 aa7.7□□□□□ -1.18
BRIP1-201ENST00000259008 RXRBP28702 533 aa7.7□□□□□ -1.18
BRIP1-201ENST00000259008 SLC4A8Q2Y0W8 1093 aa7.7□□□□□ -1.18
BRIP1-201ENST00000259008 AACSQ86V21 672 aa7.7□□□□□ -1.18
BRIP1-201ENST00000259008 ERC1Q8IUD2 1116 aa7.7□□□□□ -1.18
BRIP1-201ENST00000259008 NPATQ14207 1427 aa7.7□□□□□ -1.18
BRIP1-201ENST00000259008 IDH1O75874 414 aaKnown RBP7.7□□□□□ -1.18
BRIP1-201ENST00000259008 CEP126Q9P2H0 1117 aa7.7□□□□□ -1.18
BRIP1-201ENST00000259008 BCAR3O75815 825 aa7.69□□□□□ -1.18
BRIP1-201ENST00000259008 USP5P45974 858 aa7.69□□□□□ -1.18
BRIP1-201ENST00000259008 CCT4P50991 539 aaKnown RBP7.69□□□□□ -1.18
BRIP1-201ENST00000259008 HSP90AB3PQ58FF7 597 aa7.69□□□□□ -1.18
BRIP1-201ENST00000259008 SART3Q15020 963 aaKnown RBP7.69□□□□□ -1.18
BRIP1-201ENST00000259008 GPR162Q16538 588 aa7.69□□□□□ -1.18
BRIP1-201ENST00000259008 PPP1R42Q7Z4L9 355 aa7.69□□□□□ -1.18
BRIP1-201ENST00000259008 DZIP1Q86YF9 867 aaKnown RBP7.69□□□□□ -1.18
BRIP1-201ENST00000259008 SMARCC1Q92922 1105 aaPredicted RBP7.69□□□□□ -1.18
BRIP1-201ENST00000259008 SIRT1Q96EB6 747 aa7.69□□□□□ -1.18
BRIP1-201ENST00000259008 CCNL1Q9UK58 526 aaPredicted RBP7.69□□□□□ -1.18
BRIP1-201ENST00000259008 SRGAP3O43295 1099 aa7.69□□□□□ -1.18
BRIP1-201ENST00000259008 HSP90AB2PQ58FF8 381 aa7.69□□□□□ -1.18
BRIP1-201ENST00000259008 SCAF11Q99590 1463 aaKnown RBP7.69□□□□□ -1.18
BRIP1-201ENST00000259008 BRD4O60885 1362 aaPredicted RBP7.69□□□□□ -1.18
BRIP1-201ENST00000259008 F8W031 263 aaPredicted RBP7.69□□□□□ -1.18
BRIP1-201ENST00000259008 TPM4P67936 248 aa7.69□□□□□ -1.18
BRIP1-201ENST00000259008 PIBF1Q8WXW3 757 aa7.69□□□□□ -1.18
BRIP1-201ENST00000259008 TEX13AQ9BXU3 409 aaPredicted RBP7.69□□□□□ -1.18
BRIP1-201ENST00000259008 TMPOP42166 694 aaKnown RBP7.68□□□□□ -1.18
BRIP1-201ENST00000259008 IFIT5Q13325 482 aaKnown RBP7.68□□□□□ -1.18
BRIP1-201ENST00000259008 MSL1Q68DK7 614 aa7.68□□□□□ -1.18
BRIP1-201ENST00000259008 GCP02774 474 aa7.68□□□□□ -1.18
BRIP1-201ENST00000259008 TDO2P48775 406 aa7.68□□□□□ -1.18
BRIP1-201ENST00000259008 GJA3Q9Y6H8 435 aa7.68□□□□□ -1.18
BRIP1-201ENST00000259008 TTC21AQ8NDW8 1320 aa7.68□□□□□ -1.18
BRIP1-201ENST00000259008 FAM83GA6ND36 823 aa7.68□□□□□ -1.18
BRIP1-201ENST00000259008 POLR3DP05423 398 aaPredicted RBP7.68□□□□□ -1.18
BRIP1-201ENST00000259008 ZNF335Q9H4Z2 1342 aaPredicted RBP7.68□□□□□ -1.18
BRIP1-201ENST00000259008 ANKRD18BA2A2Z9 1011 aa7.68□□□□□ -1.18
BRIP1-201ENST00000259008 NACAP1Q9BZK3 213 aa7.68□□□□□ -1.18
BRIP1-201ENST00000259008 TRAPPC3LQ5T215 181 aa7.68□□□□□ -1.18
BRIP1-201ENST00000259008 LARP1Q6PKG0 1096 aaKnown RBP7.68□□□□□ -1.18
BRIP1-201ENST00000259008 CENPQQ7L2Z9 268 aaPredicted RBP7.68□□□□□ -1.18
BRIP1-201ENST00000259008 GZF1Q9H116 711 aaPredicted RBP7.68□□□□□ -1.18
BRIP1-201ENST00000259008 ZBED9Q6R2W3 1325 aa7.67□□□□□ -1.18
BRIP1-201ENST00000259008 TARBP1Q13395 1621 aaKnown RBP7.67□□□□□ -1.18
BRIP1-201ENST00000259008 ABCC1P33527 1531 aa7.67□□□□□ -1.18
BRIP1-201ENST00000259008 NIP7Q9Y221 180 aaKnown RBP eCLIP7.67□□□□□ -1.18
BRIP1-201ENST00000259008 KAT6BQ8WYB5 2073 aa7.67□□□□□ -1.18
BRIP1-201ENST00000259008 ZNF772Q68DY9 489 aaPredicted RBP7.67□□□□□ -1.18
BRIP1-201ENST00000259008 NUP133Q8WUM0 1156 aa7.67□□□□□ -1.18
BRIP1-201ENST00000259008 REC8O95072 547 aa7.67□□□□□ -1.18
BRIP1-201ENST00000259008 IFIT1P09914 478 aaKnown RBP7.67□□□□□ -1.18
BRIP1-201ENST00000259008 WWC2Q6AWC2 1192 aa7.67□□□□□ -1.18
BRIP1-201ENST00000259008 ZNF408Q9H9D4 720 aa7.67□□□□□ -1.18
BRIP1-201ENST00000259008 BRMS1Q9HCU9 246 aa7.67□□□□□ -1.18
BRIP1-201ENST00000259008 RIMBP2O15034 1052 aa7.66□□□□□ -1.18
BRIP1-201ENST00000259008 MYO1BO43795 1136 aa7.66□□□□□ -1.18
BRIP1-201ENST00000259008 ANXA1P04083 346 aa7.66□□□□□ -1.18
BRIP1-201ENST00000259008 MAP3K2Q9Y2U5 619 aa7.66□□□□□ -1.18
BRIP1-201ENST00000259008 TBX22Q9Y458 520 aa7.66□□□□□ -1.18
BRIP1-201ENST00000259008 GBP4Q96PP9 640 aa7.66□□□□□ -1.18
BRIP1-201ENST00000259008 R3HCC1Q9Y3T6 440 aaKnown RBP7.66□□□□□ -1.18
BRIP1-201ENST00000259008 NEO1Q92859 1461 aa7.66□□□□□ -1.18
BRIP1-201ENST00000259008 DISP3Q9P2K9 1392 aa7.66□□□□□ -1.18
BRIP1-201ENST00000259008 LMOD1P29536 600 aaPredicted RBP7.66□□□□□ -1.18
BRIP1-201ENST00000259008 SAFBQ15424 915 aaKnown RBP eCLIP7.66□□□□□ -1.18
BRIP1-201ENST00000259008 CSPP1Q1MSJ5 1256 aa7.66□□□□□ -1.18
BRIP1-201ENST00000259008 INTS3Q68E01 1043 aaKnown RBP7.66□□□□□ -1.18
BRIP1-201ENST00000259008 SNRPA1P09661 255 aaKnown RBP7.66□□□□□ -1.18
BRIP1-201ENST00000259008 SLC5A1P13866 664 aa7.66□□□□□ -1.18
BRIP1-201ENST00000259008 ATP2B1P20020 1258 aa7.66□□□□□ -1.18
BRIP1-201ENST00000259008 IL1RAPL2Q9NP60 686 aa7.66□□□□□ -1.18
BRIP1-201ENST00000259008 F6X3S4 739 aa7.66□□□□□ -1.18
BRIP1-201ENST00000259008 NFATC2IPQ8NCF5 419 aa7.66□□□□□ -1.18
BRIP1-201ENST00000259008 ZCCHC11Q5TAX3 1644 aaKnown RBP7.65□□□□□ -1.18
BRIP1-201ENST00000259008 LTKP29376 864 aa7.65□□□□□ -1.18
BRIP1-201ENST00000259008 FAM182BQ5T319 152 aa7.65□□□□□ -1.18
BRIP1-201ENST00000259008 ZSCAN25Q6NSZ9 544 aa7.65□□□□□ -1.18
BRIP1-201ENST00000259008 DZIP3Q86Y13 1208 aaKnown RBP7.65□□□□□ -1.18
BRIP1-201ENST00000259008 JDP2Q8WYK2 163 aa7.65□□□□□ -1.18
BRIP1-201ENST00000259008 CEP89Q96ST8 783 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms