RNA–Protein interactions for RNA: ENST00000258888.5

ALPK3-201, Transcript of alpha kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALPK3, Length 10,917 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3-201ENST00000258888 RDXP35241 583 aaKnown RBP15.86■□□□□ 0.13
ALPK3-201ENST00000258888 PRXQ9BXM0 1461 aa15.86■□□□□ 0.13
ALPK3-201ENST00000258888 ZHX3Q9H4I2 956 aa15.86■□□□□ 0.13
ALPK3-201ENST00000258888 CCDC191Q8NCU4 936 aa15.86■□□□□ 0.13
ALPK3-201ENST00000258888 NFE2L2Q16236 605 aa15.85■□□□□ 0.13
ALPK3-201ENST00000258888 CCDC57Q2TAC2 916 aa15.85■□□□□ 0.13
ALPK3-201ENST00000258888 ATAD2Q6PL18 1390 aa15.85■□□□□ 0.13
ALPK3-201ENST00000258888 MPHOSPH8Q99549 860 aa15.85■□□□□ 0.13
ALPK3-201ENST00000258888 PCF11O94913 1555 aaKnown RBP15.85■□□□□ 0.13
ALPK3-201ENST00000258888 ZSCAN31Q96LW9 406 aaPredicted RBP15.85■□□□□ 0.13
ALPK3-201ENST00000258888 DEF6Q9H4E7 631 aa15.85■□□□□ 0.13
ALPK3-201ENST00000258888 BTBD11A6QL63 1104 aa15.85■□□□□ 0.13
ALPK3-201ENST00000258888 FCHSD2O94868 740 aa15.85■□□□□ 0.13
ALPK3-201ENST00000258888 DDX54Q8TDD1 881 aaKnown RBP15.85■□□□□ 0.13
ALPK3-201ENST00000258888 PPP6R1Q9UPN7 881 aa15.85■□□□□ 0.13
ALPK3-201ENST00000258888 FERMT3Q86UX7 667 aa15.84■□□□□ 0.13
ALPK3-201ENST00000258888 CAMK4Q16566 473 aa15.84■□□□□ 0.13
ALPK3-201ENST00000258888 FILIP1Q7Z7B0 1213 aa15.84■□□□□ 0.13
ALPK3-201ENST00000258888 NAIPQ13075 1403 aa15.84■□□□□ 0.13
ALPK3-201ENST00000258888 CCDC85AQ96PX6 553 aaPredicted RBP15.84■□□□□ 0.13
ALPK3-201ENST00000258888 DACH1Q9UI36 760 aa15.84■□□□□ 0.13
ALPK3-201ENST00000258888 TOM1L2Q6ZVM7 507 aa15.84■□□□□ 0.13
ALPK3-201ENST00000258888 UPF3BQ9BZI7 483 aaKnown RBP15.84■□□□□ 0.13
ALPK3-201ENST00000258888 PTPN23Q9H3S7 1636 aa15.84■□□□□ 0.13
ALPK3-201ENST00000258888 CDKL5O76039 1030 aa15.83■□□□□ 0.13
ALPK3-201ENST00000258888 SYCP1Q15431 976 aa15.83■□□□□ 0.13
ALPK3-201ENST00000258888 CBFA2T2O43439 604 aa15.83■□□□□ 0.13
ALPK3-201ENST00000258888 TDO2P48775 406 aa15.83■□□□□ 0.13
ALPK3-201ENST00000258888 MCM10Q7L590 875 aa15.83■□□□□ 0.13
ALPK3-201ENST00000258888 ZNF692Q9BU19 519 aaPredicted RBP15.83■□□□□ 0.13
ALPK3-201ENST00000258888 SSH1Q8WYL5 1049 aa15.83■□□□□ 0.12
ALPK3-201ENST00000258888 TANGO6Q9C0B7 1094 aa15.83■□□□□ 0.12
ALPK3-201ENST00000258888 CFAP45Q9UL16 551 aa15.83■□□□□ 0.12
ALPK3-201ENST00000258888 SPG7Q9UQ90 795 aa15.83■□□□□ 0.12
ALPK3-201ENST00000258888 MX1P20591 662 aa15.82■□□□□ 0.12
ALPK3-201ENST00000258888 PIBF1Q8WXW3 757 aa15.82■□□□□ 0.12
ALPK3-201ENST00000258888 NKTRP30414 1462 aaKnown RBP15.82■□□□□ 0.12
ALPK3-201ENST00000258888 DHX8Q14562 1220 aaKnown RBP15.82■□□□□ 0.12
ALPK3-201ENST00000258888 UBAC1Q9BSL1 405 aa15.82■□□□□ 0.12
ALPK3-201ENST00000258888 CENPHQ9H3R5 247 aa15.82■□□□□ 0.12
ALPK3-201ENST00000258888 XPCQ01831 940 aaPredicted RBP15.82■□□□□ 0.12
ALPK3-201ENST00000258888 TOPBP1Q92547 1522 aa15.82■□□□□ 0.12
ALPK3-201ENST00000258888 GOLGA6L10A6NI86 522 aa15.82■□□□□ 0.12
ALPK3-201ENST00000258888 FAM193AP78312 1265 aa15.82■□□□□ 0.12
ALPK3-201ENST00000258888 MAP3K11Q16584 847 aa15.81■□□□□ 0.12
ALPK3-201ENST00000258888 CCDC181Q5TID7 509 aa15.81■□□□□ 0.12
ALPK3-201ENST00000258888 SLC52A1Q9NWF4 448 aa15.81■□□□□ 0.12
ALPK3-201ENST00000258888 KRT32Q14532 448 aa15.81■□□□□ 0.12
ALPK3-201ENST00000258888 NOL7Q9UMY1 257 aaKnown RBP15.81■□□□□ 0.12
ALPK3-201ENST00000258888 EPRSP07814 1512 aaKnown RBP15.81■□□□□ 0.12
ALPK3-201ENST00000258888 SSBP05455 408 aaKnown RBP eCLIP15.81■□□□□ 0.12
ALPK3-201ENST00000258888 PRPF40BQ6NWY9 871 aaKnown RBP15.81■□□□□ 0.12
ALPK3-201ENST00000258888 DUSP27Q5VZP5 1158 aa15.81■□□□□ 0.12
ALPK3-201ENST00000258888 CTNNA3Q9UI47 895 aa15.8■□□□□ 0.12
ALPK3-201ENST00000258888 CEP126Q9P2H0 1117 aa15.8■□□□□ 0.12
ALPK3-201ENST00000258888 SLC26A8Q96RN1 970 aa15.8■□□□□ 0.12
ALPK3-201ENST00000258888 LUC7LQ9NQ29 371 aaKnown RBP15.8■□□□□ 0.12
ALPK3-201ENST00000258888 ERLIN2O94905 339 aa15.8■□□□□ 0.12
ALPK3-201ENST00000258888 RPAP2Q8IXW5 612 aaPredicted RBP15.8■□□□□ 0.12
ALPK3-201ENST00000258888 ERLIN1O75477 346 aa15.79■□□□□ 0.12
ALPK3-201ENST00000258888 RARSP54136 660 aaKnown RBP15.79■□□□□ 0.12
ALPK3-201ENST00000258888 ZSCAN25Q6NSZ9 544 aa15.79■□□□□ 0.12
ALPK3-201ENST00000258888 CCDC83Q8IWF9 413 aa15.79■□□□□ 0.12
ALPK3-201ENST00000258888 MRC2Q9UBG0 1479 aa15.79■□□□□ 0.12
ALPK3-201ENST00000258888 POLA1P09884 1462 aaPredicted RBP15.79■□□□□ 0.12
ALPK3-201ENST00000258888 SNAPC4Q5SXM2 1469 aa15.79■□□□□ 0.12
ALPK3-201ENST00000258888 C11orf95C9JLR9 678 aaPredicted RBP15.78■□□□□ 0.12
ALPK3-201ENST00000258888 IDH1O75874 414 aaKnown RBP15.78■□□□□ 0.12
ALPK3-201ENST00000258888 SOGA3Q5TF21 947 aa15.78■□□□□ 0.12
ALPK3-201ENST00000258888 ZSCAN30Q86W11 494 aa15.78■□□□□ 0.12
ALPK3-201ENST00000258888 RAI14Q9P0K7 980 aa15.78■□□□□ 0.12
ALPK3-201ENST00000258888 RAPGEF3O95398 923 aa15.78■□□□□ 0.12
ALPK3-201ENST00000258888 CAMSAP2Q08AD1 1489 aa15.78■□□□□ 0.12
ALPK3-201ENST00000258888 GNAT3A8MTJ3 354 aa15.78■□□□□ 0.12
ALPK3-201ENST00000258888 SEPT11Q9NVA2 429 aaKnown RBP15.78■□□□□ 0.12
ALPK3-201ENST00000258888 RPGRIP1LQ68CZ1 1315 aa15.77■□□□□ 0.12
ALPK3-201ENST00000258888 CCDC141Q6ZP82 1450 aa15.77■□□□□ 0.12
ALPK3-201ENST00000258888 KIAA0754O94854 1291 aa15.77■□□□□ 0.12
ALPK3-201ENST00000258888 PRDM11Q9NQV5 511 aa15.77■□□□□ 0.12
ALPK3-201ENST00000258888 PDCL3Q9H2J4 239 aa15.77■□□□□ 0.11
ALPK3-201ENST00000258888 ARHGEF11O15085 1522 aa15.77■□□□□ 0.11
ALPK3-201ENST00000258888 IMMTQ16891 758 aaKnown RBP15.77■□□□□ 0.11
ALPK3-201ENST00000258888 CFAP100Q494V2 611 aa15.77■□□□□ 0.11
ALPK3-201ENST00000258888 SSFA2P28290 1259 aa15.76■□□□□ 0.11
ALPK3-201ENST00000258888 THEMISQ8N1K5 641 aaPredicted RBP15.76■□□□□ 0.11
ALPK3-201ENST00000258888 LRRFIP2Q9Y608 721 aaKnown RBP15.76■□□□□ 0.11
ALPK3-201ENST00000258888 EIF3JO75822 258 aaKnown RBP15.76■□□□□ 0.11
ALPK3-201ENST00000258888 ERICH4A6NGS2 130 aa15.76■□□□□ 0.11
ALPK3-201ENST00000258888 LRP2BPQ9P2M1 347 aa15.76■□□□□ 0.11
ALPK3-201ENST00000258888 KIF1BPQ96EK5 621 aa15.76■□□□□ 0.11
ALPK3-201ENST00000258888 IFT140Q96RY7 1462 aa15.75■□□□□ 0.11
ALPK3-201ENST00000258888 FAM135AQ9P2D6 1515 aa15.75■□□□□ 0.11
ALPK3-201ENST00000258888 AIDAQ96BJ3 306 aa15.75■□□□□ 0.11
ALPK3-201ENST00000258888 NEFHP12036 1026 aa15.75■□□□□ 0.11
ALPK3-201ENST00000258888 ARHGAP29Q52LW3 1261 aa15.75■□□□□ 0.11
ALPK3-201ENST00000258888 TXLNBQ8N3L3 684 aa15.75■□□□□ 0.11
ALPK3-201ENST00000258888 NUDT16Q96DE0 195 aaKnown RBP15.75■□□□□ 0.11
ALPK3-201ENST00000258888 EPB41L2O43491 1005 aaKnown RBP15.74■□□□□ 0.11
ALPK3-201ENST00000258888 CCDC183Q5T5S1 534 aa15.74■□□□□ 0.11
ALPK3-201ENST00000258888 KIAA1328Q86T90 577 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms