RNA–Protein interactions for RNA: ENST00000258613.4

THSD1-201, Transcript of thrombospondin type 1 domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THSD1, Length 2,962 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THSD1-201ENST00000258613 RTF1Q92541 710 aaKnown RBP16.56■□□□□ 0.24
THSD1-201ENST00000258613 TSPYL4Q9UJ04 414 aa16.56■□□□□ 0.24
THSD1-201ENST00000258613 NALCNQ8IZF0 1738 aa16.56■□□□□ 0.24
THSD1-201ENST00000258613 APBB1O00213 710 aa16.56■□□□□ 0.24
THSD1-201ENST00000258613 SLC4A2P04920 1241 aa16.56■□□□□ 0.24
THSD1-201ENST00000258613 DDRGK1Q96HY6 314 aa16.56■□□□□ 0.24
THSD1-201ENST00000258613 LRRC59Q96AG4 307 aaKnown RBP16.55■□□□□ 0.24
THSD1-201ENST00000258613 PIK3R4Q99570 1358 aa16.55■□□□□ 0.24
THSD1-201ENST00000258613 MFAP1P55081 439 aaKnown RBP16.55■□□□□ 0.24
THSD1-201ENST00000258613 DDX17Q92841 729 aaKnown RBP16.55■□□□□ 0.24
THSD1-201ENST00000258613 SLC4A10Q6U841 1118 aa16.54■□□□□ 0.24
THSD1-201ENST00000258613 ABCC4O15439 1325 aa16.54■□□□□ 0.24
THSD1-201ENST00000258613 IGSF1Q8N6C5 1336 aa16.54■□□□□ 0.24
THSD1-201ENST00000258613 BRPF1P55201 1214 aaPredicted RBP16.54■□□□□ 0.24
THSD1-201ENST00000258613 SPRYD3Q8NCJ5 442 aa16.54■□□□□ 0.24
THSD1-201ENST00000258613 CRB1P82279 1406 aa16.53■□□□□ 0.24
THSD1-201ENST00000258613 ZNF428Q96B54 188 aa16.53■□□□□ 0.24
THSD1-201ENST00000258613 RGPD1P0DJD0 1748 aa16.53■□□□□ 0.24
THSD1-201ENST00000258613 NBPF6Q5VWK0 638 aa16.53■□□□□ 0.24
THSD1-201ENST00000258613 IL17REQ8NFR9 667 aa16.53■□□□□ 0.24
THSD1-201ENST00000258613 NBPF4Q96M43 638 aa16.53■□□□□ 0.24
THSD1-201ENST00000258613 ARHGAP45Q92619 1136 aa16.52■□□□□ 0.24
THSD1-201ENST00000258613 NUCB1Q02818 461 aa16.52■□□□□ 0.23
THSD1-201ENST00000258613 CHD1LQ86WJ1 897 aa16.52■□□□□ 0.23
THSD1-201ENST00000258613 ARHGEF10O15013 1369 aa16.52■□□□□ 0.23
THSD1-201ENST00000258613 FMN2Q9NZ56 1722 aa16.51■□□□□ 0.23
THSD1-201ENST00000258613 MEIS3Q99687 375 aa16.51■□□□□ 0.23
THSD1-201ENST00000258613 RTL5Q5HYW3 569 aaPredicted RBP16.5■□□□□ 0.23
THSD1-201ENST00000258613 C16orf71Q8IYS4 520 aaPredicted RBP16.5■□□□□ 0.23
THSD1-201ENST00000258613 SLKQ9H2G2 1235 aaPredicted RBP16.5■□□□□ 0.23
THSD1-201ENST00000258613 CHD2O14647 1828 aaKnown RBP16.5■□□□□ 0.23
THSD1-201ENST00000258613 API5Q9BZZ5 524 aaKnown RBP16.5■□□□□ 0.23
THSD1-201ENST00000258613 VIRMAQ69YN4 1812 aaKnown RBP16.49■□□□□ 0.23
THSD1-201ENST00000258613 KDRP35968 1356 aa16.49■□□□□ 0.23
THSD1-201ENST00000258613 MARF1Q9Y4F3 1742 aaKnown RBP16.49■□□□□ 0.23
THSD1-201ENST00000258613 LGR6Q9HBX8 967 aa16.49■□□□□ 0.23
THSD1-201ENST00000258613 GNAT3A8MTJ3 354 aa16.48■□□□□ 0.23
THSD1-201ENST00000258613 PROSER2Q86WR7 435 aaPredicted RBP16.48■□□□□ 0.23
THSD1-201ENST00000258613 ANKARQ7Z5J8 1434 aa16.48■□□□□ 0.23
THSD1-201ENST00000258613 OTUD7AQ8TE49 926 aaPredicted RBP16.48■□□□□ 0.23
THSD1-201ENST00000258613 RGS12O14924 1447 aa16.48■□□□□ 0.23
THSD1-201ENST00000258613 SMARCA5O60264 1052 aaPredicted RBP16.47■□□□□ 0.23
THSD1-201ENST00000258613 PKNOX2Q96KN3 472 aa16.47■□□□□ 0.23
THSD1-201ENST00000258613 MSH6P52701 1360 aa16.47■□□□□ 0.23
THSD1-201ENST00000258613 GAS2L2Q8NHY3 880 aa16.47■□□□□ 0.23
THSD1-201ENST00000258613 RTN4Q9NQC3 1192 aaKnown RBP16.47■□□□□ 0.23
THSD1-201ENST00000258613 TBC1D32Q96NH3 1257 aa16.47■□□□□ 0.23
THSD1-201ENST00000258613 KCNQ3O43525 872 aa16.46■□□□□ 0.23
THSD1-201ENST00000258613 NPHP4O75161 1426 aaPredicted RBP16.45■□□□□ 0.22
THSD1-201ENST00000258613 HSPA2P54652 639 aa16.45■□□□□ 0.22
THSD1-201ENST00000258613 AXIN2Q9Y2T1 843 aa16.45■□□□□ 0.22
THSD1-201ENST00000258613 ZC3H6P61129 1189 aaKnown RBP16.45■□□□□ 0.22
THSD1-201ENST00000258613 NFKBIBQ15653 356 aa16.45■□□□□ 0.22
THSD1-201ENST00000258613 NWD1Q149M9 1564 aa16.44■□□□□ 0.22
THSD1-201ENST00000258613 INTS3Q68E01 1043 aaKnown RBP16.44■□□□□ 0.22
THSD1-201ENST00000258613 UPF2Q9HAU5 1272 aaKnown RBP16.44■□□□□ 0.22
THSD1-201ENST00000258613 GCP02774 474 aa16.44■□□□□ 0.22
THSD1-201ENST00000258613 ANXA1P04083 346 aa16.44■□□□□ 0.22
THSD1-201ENST00000258613 EIF2S2P20042 333 aaKnown RBP16.44■□□□□ 0.22
THSD1-201ENST00000258613 MPRIPQ6WCQ1 1025 aa16.44■□□□□ 0.22
THSD1-201ENST00000258613 IP6K1Q92551 441 aa16.44■□□□□ 0.22
THSD1-201ENST00000258613 RGPD2P0DJD1 1756 aa16.44■□□□□ 0.22
THSD1-201ENST00000258613 IL27Q8NEV9 243 aa16.44■□□□□ 0.22
THSD1-201ENST00000258613 C22orf23Q9BZE7 217 aa16.43■□□□□ 0.22
THSD1-201ENST00000258613 ADGRL3Q9HAR2 1447 aa16.43■□□□□ 0.22
THSD1-201ENST00000258613 KIAA0232Q92628 1395 aa16.43■□□□□ 0.22
THSD1-201ENST00000258613 FRAT2O75474 233 aaPredicted RBP16.43■□□□□ 0.22
THSD1-201ENST00000258613 CABLES1Q8TDN4 633 aa16.43■□□□□ 0.22
THSD1-201ENST00000258613 LTN1O94822 1766 aa16.43■□□□□ 0.22
THSD1-201ENST00000258613 FKBP5Q13451 457 aaPredicted RBP16.42■□□□□ 0.22
THSD1-201ENST00000258613 TBC1D2Q9BYX2 928 aa16.42■□□□□ 0.22
THSD1-201ENST00000258613 PHAXQ9H814 394 aaKnown RBP16.42■□□□□ 0.22
THSD1-201ENST00000258613 ADAMTSL3P82987 1691 aa16.42■□□□□ 0.22
THSD1-201ENST00000258613 CEP85Q6P2H3 762 aa16.41■□□□□ 0.22
THSD1-201ENST00000258613 GCC1Q96CN9 775 aa16.41■□□□□ 0.22
THSD1-201ENST00000258613 KRT28Q7Z3Y7 464 aa16.41■□□□□ 0.22
THSD1-201ENST00000258613 MAP3K5Q99683 1374 aa16.4■□□□□ 0.22
THSD1-201ENST00000258613 TAF7Q15545 349 aaPredicted RBP16.4■□□□□ 0.22
THSD1-201ENST00000258613 FLIIQ13045 1269 aa16.4■□□□□ 0.22
THSD1-201ENST00000258613 STK31Q9BXU1 1019 aa16.4■□□□□ 0.22
THSD1-201ENST00000258613 RTL1A6NKG5 1358 aa16.39■□□□□ 0.21
THSD1-201ENST00000258613 TSHZ3Q63HK5 1081 aa16.39■□□□□ 0.21
THSD1-201ENST00000258613 ATP10DQ9P241 1426 aa16.39■□□□□ 0.21
THSD1-201ENST00000258613 GSPT1P15170 499 aaKnown RBP16.38■□□□□ 0.21
THSD1-201ENST00000258613 ZNF530Q6P9A1 599 aaPredicted RBP16.38■□□□□ 0.21
THSD1-201ENST00000258613 DCTPP1Q9H773 170 aa16.38■□□□□ 0.21
THSD1-201ENST00000258613 PLEKHM2Q8IWE5 1019 aa16.38■□□□□ 0.21
THSD1-201ENST00000258613 ANKRD44Q8N8A2 993 aa16.38■□□□□ 0.21
THSD1-201ENST00000258613 PRAMEF22A3QJZ6 481 aa16.38■□□□□ 0.21
THSD1-201ENST00000258613 EXOC6BQ9Y2D4 811 aa16.38■□□□□ 0.21
THSD1-201ENST00000258613 PTPRCP08575 1304 aa16.37■□□□□ 0.21
THSD1-201ENST00000258613 TBC1D9Q6ZT07 1266 aa16.37■□□□□ 0.21
THSD1-201ENST00000258613 ARHGEF25Q86VW2 580 aa16.37■□□□□ 0.21
THSD1-201ENST00000258613 ANKRD24Q8TF21 1146 aa16.37■□□□□ 0.21
THSD1-201ENST00000258613 HDGFL1Q5TGJ6 251 aa16.37■□□□□ 0.21
THSD1-201ENST00000258613 CHMP4BQ9H444 224 aaKnown RBP16.36■□□□□ 0.21
THSD1-201ENST00000258613 NFAT5O94916 1531 aa16.36■□□□□ 0.21
THSD1-201ENST00000258613 RBM42Q9BTD8 480 aaKnown RBP16.36■□□□□ 0.21
THSD1-201ENST00000258613 ZNF142P52746 1687 aaPredicted RBP16.36■□□□□ 0.21
THSD1-201ENST00000258613 BMP2KLQ5H9B9 411 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms