RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 KLHL40Q2TBA0 621 aa5.76□□□□□ -1.49
USP44-201ENST00000258499 DDX54Q8TDD1 881 aaKnown RBP5.76□□□□□ -1.49
USP44-201ENST00000258499 YTHDC2Q9H6S0 1430 aaKnown RBP5.76□□□□□ -1.49
USP44-201ENST00000258499 CWC22Q9HCG8 908 aaKnown RBP5.76□□□□□ -1.49
USP44-201ENST00000258499 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.76□□□□□ -1.49
USP44-201ENST00000258499 VPS37CA5D8V6 355 aaPredicted RBP5.76□□□□□ -1.49
USP44-201ENST00000258499 HDGFL1Q5TGJ6 251 aa5.76□□□□□ -1.49
USP44-201ENST00000258499 CEP85Q6P2H3 762 aa5.76□□□□□ -1.49
USP44-201ENST00000258499 ZSCAN30Q86W11 494 aa5.76□□□□□ -1.49
USP44-201ENST00000258499 DIAPH3Q9NSV4 1193 aa5.76□□□□□ -1.49
USP44-201ENST00000258499 FIBPO43427 364 aa5.76□□□□□ -1.49
USP44-201ENST00000258499 DTNBO60941 627 aa5.76□□□□□ -1.49
USP44-201ENST00000258499 CCT4P50991 539 aaKnown RBP5.76□□□□□ -1.49
USP44-201ENST00000258499 XPCQ01831 940 aaPredicted RBP5.76□□□□□ -1.49
USP44-201ENST00000258499 CCDC30Q5VVM6 783 aa5.76□□□□□ -1.49
USP44-201ENST00000258499 G2E3Q7L622 706 aa5.76□□□□□ -1.49
USP44-201ENST00000258499 PPIP5K1Q6PFW1 1433 aa5.75□□□□□ -1.49
USP44-201ENST00000258499 FSD2A1L4K1 749 aa5.75□□□□□ -1.49
USP44-201ENST00000258499 MX1P20591 662 aa5.75□□□□□ -1.49
USP44-201ENST00000258499 TEFQ10587 303 aa5.75□□□□□ -1.49
USP44-201ENST00000258499 ZSCAN23Q3MJ62 389 aa5.75□□□□□ -1.49
USP44-201ENST00000258499 DRC7Q8IY82 874 aa5.75□□□□□ -1.49
USP44-201ENST00000258499 USHBP1Q8N6Y0 703 aa5.75□□□□□ -1.49
USP44-201ENST00000258499 USP26Q9BXU7 913 aa5.75□□□□□ -1.49
USP44-201ENST00000258499 C9orf78Q9NZ63 289 aaPredicted RBP5.75□□□□□ -1.49
USP44-201ENST00000258499 PRIM1P49642 420 aaKnown RBP5.75□□□□□ -1.49
USP44-201ENST00000258499 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.75□□□□□ -1.49
USP44-201ENST00000258499 LRRFIP2Q9Y608 721 aaKnown RBP5.75□□□□□ -1.49
USP44-201ENST00000258499 ZCCHC11Q5TAX3 1644 aaKnown RBP5.75□□□□□ -1.49
USP44-201ENST00000258499 MAP3K4Q9Y6R4 1608 aa5.75□□□□□ -1.49
USP44-201ENST00000258499 SRGAP3O43295 1099 aa5.75□□□□□ -1.49
USP44-201ENST00000258499 PHF14O94880 888 aa5.75□□□□□ -1.49
USP44-201ENST00000258499 PDE1AP54750 535 aa5.75□□□□□ -1.49
USP44-201ENST00000258499 TMX3Q96JJ7 454 aa5.75□□□□□ -1.49
USP44-201ENST00000258499 SMC3Q9UQE7 1217 aa5.75□□□□□ -1.49
USP44-201ENST00000258499 ACEP12821 1306 aa5.75□□□□□ -1.49
USP44-201ENST00000258499 LAMC1P11047 1609 aa5.74□□□□□ -1.49
USP44-201ENST00000258499 MBD3O95983 291 aa5.74□□□□□ -1.49
USP44-201ENST00000258499 AIMP1Q12904 312 aaKnown RBP5.74□□□□□ -1.49
USP44-201ENST00000258499 CWC27Q6UX04 472 aaKnown RBP5.74□□□□□ -1.49
USP44-201ENST00000258499 ABTB2Q8N961 1025 aa5.74□□□□□ -1.49
USP44-201ENST00000258499 CLASP1Q7Z460 1538 aa5.74□□□□□ -1.49
USP44-201ENST00000258499 CHD1O14646 1710 aa5.74□□□□□ -1.49
USP44-201ENST00000258499 ANXA1P04083 346 aa5.74□□□□□ -1.49
USP44-201ENST00000258499 FLIIQ13045 1269 aa5.74□□□□□ -1.49
USP44-201ENST00000258499 RBM33Q96EV2 1170 aaKnown RBP5.74□□□□□ -1.49
USP44-201ENST00000258499 IFIT2P09913 472 aaKnown RBP5.74□□□□□ -1.49
USP44-201ENST00000258499 MSH6P52701 1360 aa5.74□□□□□ -1.49
USP44-201ENST00000258499 ABCA6Q8N139 1617 aa5.74□□□□□ -1.49
USP44-201ENST00000258499 ABCC4O15439 1325 aa5.73□□□□□ -1.49
USP44-201ENST00000258499 NCBP3Q53F19 620 aaKnown RBP5.73□□□□□ -1.49
USP44-201ENST00000258499 TSPY26PQ9H489 355 aa5.73□□□□□ -1.49
USP44-201ENST00000258499 TET3O43151 1660 aa5.73□□□□□ -1.49
USP44-201ENST00000258499 PTPRCP08575 1304 aa5.73□□□□□ -1.49
USP44-201ENST00000258499 MCM2P49736 904 aa5.73□□□□□ -1.49
USP44-201ENST00000258499 MTHFSDQ2M296 383 aaKnown RBP5.73□□□□□ -1.49
USP44-201ENST00000258499 GPATCH3Q96I76 525 aa5.73□□□□□ -1.49
USP44-201ENST00000258499 BCL11BQ9C0K0 894 aaPredicted RBP5.73□□□□□ -1.49
USP44-201ENST00000258499 SPHKAPQ2M3C7 1700 aa5.73□□□□□ -1.49
USP44-201ENST00000258499 ZMYM3Q14202 1370 aa5.73□□□□□ -1.49
USP44-201ENST00000258499 TTC21BQ7Z4L5 1316 aa5.73□□□□□ -1.49
USP44-201ENST00000258499 CEBPAP49715 358 aaPredicted RBP5.73□□□□□ -1.49
USP44-201ENST00000258499 SRCIN1Q9C0H9 1055 aa5.73□□□□□ -1.49
USP44-201ENST00000258499 SPG7Q9UQ90 795 aa5.73□□□□□ -1.49
USP44-201ENST00000258499 EFCAB6Q5THR3 1501 aa5.73□□□□□ -1.49
USP44-201ENST00000258499 UHRF1BP1LA0JNW5 1464 aa5.73□□□□□ -1.49
USP44-201ENST00000258499 POGZQ7Z3K3 1410 aa5.73□□□□□ -1.49
USP44-201ENST00000258499 RIMS2Q9UQ26 1411 aa5.73□□□□□ -1.49
USP44-201ENST00000258499 HSP90B1P14625 803 aaKnown RBP5.72□□□□□ -1.49
USP44-201ENST00000258499 FOSBP53539 338 aa5.72□□□□□ -1.49
USP44-201ENST00000258499 CNTROBQ8N137 903 aa5.72□□□□□ -1.49
USP44-201ENST00000258499 CLASRPQ8N2M8 674 aaKnown RBP5.72□□□□□ -1.49
USP44-201ENST00000258499 RBSNQ9H1K0 784 aa5.72□□□□□ -1.49
USP44-201ENST00000258499 ZFYVE9O95405 1425 aa5.72□□□□□ -1.49
USP44-201ENST00000258499 ZKSCAN1P17029 563 aaPredicted RBP5.72□□□□□ -1.49
USP44-201ENST00000258499 CHAF1AQ13111 956 aaPredicted RBP5.72□□□□□ -1.49
USP44-201ENST00000258499 KIF2CQ99661 725 aa5.72□□□□□ -1.49
USP44-201ENST00000258499 SIL1Q9H173 461 aa5.72□□□□□ -1.49
USP44-201ENST00000258499 YEATS2Q9ULM3 1422 aa5.72□□□□□ -1.49
USP44-201ENST00000258499 ERBB4Q15303 1308 aa5.72□□□□□ -1.49
USP44-201ENST00000258499 GNAT3A8MTJ3 354 aa5.72□□□□□ -1.49
USP44-201ENST00000258499 TPM2P07951 284 aa5.72□□□□□ -1.49
USP44-201ENST00000258499 FERMT3Q86UX7 667 aa5.72□□□□□ -1.49
USP44-201ENST00000258499 ESYT1Q9BSJ8 1104 aa5.72□□□□□ -1.49
USP44-201ENST00000258499 CCDC39Q9UFE4 941 aa5.72□□□□□ -1.49
USP44-201ENST00000258499 ATP6V1DQ9Y5K8 247 aa5.72□□□□□ -1.49
USP44-201ENST00000258499 IQGAP1P46940 1657 aa5.71□□□□□ -1.49
USP44-201ENST00000258499 UQCRHLA0A096LP55 91 aa5.71□□□□□ -1.49
USP44-201ENST00000258499 CHL1O00533 1208 aa5.71□□□□□ -1.49
USP44-201ENST00000258499 RRP9O43818 475 aaKnown RBP5.71□□□□□ -1.49
USP44-201ENST00000258499 UQCRHP07919 91 aa5.71□□□□□ -1.49
USP44-201ENST00000258499 TAF7Q15545 349 aaPredicted RBP5.71□□□□□ -1.49
USP44-201ENST00000258499 SPC24Q8NBT2 197 aa5.71□□□□□ -1.49
USP44-201ENST00000258499 RUFY2Q8WXA3 655 aa5.71□□□□□ -1.49
USP44-201ENST00000258499 USP25Q9UHP3 1055 aa5.71□□□□□ -1.49
USP44-201ENST00000258499 ZNF330Q9Y3S2 320 aaPredicted RBP5.71□□□□□ -1.49
USP44-201ENST00000258499 RNF17Q9BXT8 1623 aaKnown RBP5.71□□□□□ -1.49
USP44-201ENST00000258499 WDR33Q9C0J8 1336 aaKnown RBP5.71□□□□□ -1.49
USP44-201ENST00000258499 PNMA6EA0A0J9YXQ4 647 aa5.71□□□□□ -1.5
USP44-201ENST00000258499 C1orf141Q5JVX7 400 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms