RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 GZF1Q9H116 711 aaPredicted RBP18.35■□□□□ 0.53
TRAFD1-201ENST00000257604 RIMS1Q86UR5 1692 aaKnown RBP18.34■□□□□ 0.53
TRAFD1-201ENST00000257604 RGPD8O14715 1765 aaPredicted RBP18.34■□□□□ 0.53
TRAFD1-201ENST00000257604 UBE2Q2Q8WVN8 375 aa18.34■□□□□ 0.53
TRAFD1-201ENST00000257604 OVOS2A0A0J9YW53 1432 aa18.34■□□□□ 0.53
TRAFD1-201ENST00000257604 OVOS2Q6IE36 1432 aa18.34■□□□□ 0.53
TRAFD1-201ENST00000257604 ADGRB2O60241 1585 aa18.34■□□□□ 0.53
TRAFD1-201ENST00000257604 GNAT3A8MTJ3 354 aa18.34■□□□□ 0.53
TRAFD1-201ENST00000257604 STK31Q9BXU1 1019 aa18.34■□□□□ 0.53
TRAFD1-201ENST00000257604 LGR6Q9HBX8 967 aa18.34■□□□□ 0.53
TRAFD1-201ENST00000257604 CHL1O00533 1208 aa18.33■□□□□ 0.53
TRAFD1-201ENST00000257604 SMARCA5O60264 1052 aaPredicted RBP18.33■□□□□ 0.53
TRAFD1-201ENST00000257604 CSB-PGBD3P0DP91 1061 aa18.33■□□□□ 0.53
TRAFD1-201ENST00000257604 MEIS3Q99687 375 aa18.33■□□□□ 0.52
TRAFD1-201ENST00000257604 API5Q9BZZ5 524 aaKnown RBP18.33■□□□□ 0.52
TRAFD1-201ENST00000257604 CHRNA2Q15822 529 aa18.32■□□□□ 0.52
TRAFD1-201ENST00000257604 GAS2L2Q8NHY3 880 aa18.32■□□□□ 0.52
TRAFD1-201ENST00000257604 SBNO1A3KN83 1393 aa18.32■□□□□ 0.52
TRAFD1-201ENST00000257604 C16orf71Q8IYS4 520 aaPredicted RBP18.32■□□□□ 0.52
TRAFD1-201ENST00000257604 KRT28Q7Z3Y7 464 aa18.32■□□□□ 0.52
TRAFD1-201ENST00000257604 DIP2AQ14689 1571 aa18.32■□□□□ 0.52
TRAFD1-201ENST00000257604 ATF3P18847 181 aa18.31■□□□□ 0.52
TRAFD1-201ENST00000257604 IL17REQ8NFR9 667 aa18.31■□□□□ 0.52
TRAFD1-201ENST00000257604 GCP02774 474 aa18.31■□□□□ 0.52
TRAFD1-201ENST00000257604 NLRP2Q9NX02 1062 aa18.31■□□□□ 0.52
TRAFD1-201ENST00000257604 CHD1LQ86WJ1 897 aa18.3■□□□□ 0.52
TRAFD1-201ENST00000257604 ZNF530Q6P9A1 599 aaPredicted RBP18.3■□□□□ 0.52
TRAFD1-201ENST00000257604 ITSN1Q15811 1721 aa18.3■□□□□ 0.52
TRAFD1-201ENST00000257604 KCNQ3O43525 872 aa18.3■□□□□ 0.52
TRAFD1-201ENST00000257604 SIRT2Q8IXJ6 389 aa18.29■□□□□ 0.52
TRAFD1-201ENST00000257604 ANKRD26Q9UPS8 1709 aa18.29■□□□□ 0.52
TRAFD1-201ENST00000257604 TEFQ10587 303 aa18.29■□□□□ 0.52
TRAFD1-201ENST00000257604 HAP1P54257 671 aaPredicted RBP18.28■□□□□ 0.52
TRAFD1-201ENST00000257604 ARHGAP23Q9P227 1491 aa18.28■□□□□ 0.52
TRAFD1-201ENST00000257604 NCBP3Q53F19 620 aaKnown RBP18.28■□□□□ 0.52
TRAFD1-201ENST00000257604 CEP170BQ9Y4F5 1589 aaPredicted RBP18.27■□□□□ 0.52
TRAFD1-201ENST00000257604 HDAC1Q13547 482 aaPredicted RBP18.27■□□□□ 0.52
TRAFD1-201ENST00000257604 TSHZ3Q63HK5 1081 aa18.27■□□□□ 0.51
TRAFD1-201ENST00000257604 AXIN2Q9Y2T1 843 aa18.27■□□□□ 0.51
TRAFD1-201ENST00000257604 SLIT1O75093 1534 aa18.26■□□□□ 0.51
TRAFD1-201ENST00000257604 OTUD7AQ8TE49 926 aaPredicted RBP18.26■□□□□ 0.51
TRAFD1-201ENST00000257604 FOXD4L1Q9NU39 408 aa18.26■□□□□ 0.51
TRAFD1-201ENST00000257604 HDGFL1Q5TGJ6 251 aa18.26■□□□□ 0.51
TRAFD1-201ENST00000257604 PHAXQ9H814 394 aaKnown RBP18.26■□□□□ 0.51
TRAFD1-201ENST00000257604 IGSF1Q8N6C5 1336 aa18.25■□□□□ 0.51
TRAFD1-201ENST00000257604 PTCH1Q13635 1447 aa18.25■□□□□ 0.51
TRAFD1-201ENST00000257604 ANKRD24Q8TF21 1146 aa18.25■□□□□ 0.51
TRAFD1-201ENST00000257604 USP31Q70CQ4 1352 aa18.25■□□□□ 0.51
TRAFD1-201ENST00000257604 SMC5Q8IY18 1101 aa18.25■□□□□ 0.51
TRAFD1-201ENST00000257604 EXOC6BQ9Y2D4 811 aa18.25■□□□□ 0.51
TRAFD1-201ENST00000257604 AAMPQ13685 434 aa18.24■□□□□ 0.51
TRAFD1-201ENST00000257604 AIMP1Q12904 312 aaKnown RBP18.24■□□□□ 0.51
TRAFD1-201ENST00000257604 C1orf141Q5JVX7 400 aa18.24■□□□□ 0.51
TRAFD1-201ENST00000257604 IP6K1Q92551 441 aa18.24■□□□□ 0.51
TRAFD1-201ENST00000257604 NUCB1Q02818 461 aa18.23■□□□□ 0.51
TRAFD1-201ENST00000257604 TAF7Q15545 349 aaPredicted RBP18.23■□□□□ 0.51
TRAFD1-201ENST00000257604 NPHP4O75161 1426 aaPredicted RBP18.23■□□□□ 0.51
TRAFD1-201ENST00000257604 USP19O94966 1318 aa18.23■□□□□ 0.51
TRAFD1-201ENST00000257604 PIP4K2AP48426 406 aaPredicted RBP18.23■□□□□ 0.51
TRAFD1-201ENST00000257604 MSH6P52701 1360 aa18.23■□□□□ 0.51
TRAFD1-201ENST00000257604 C22orf23Q9BZE7 217 aa18.22■□□□□ 0.51
TRAFD1-201ENST00000257604 MON2Q7Z3U7 1717 aa18.22■□□□□ 0.51
TRAFD1-201ENST00000257604 SSH2Q76I76 1423 aa18.22■□□□□ 0.51
TRAFD1-201ENST00000257604 FLIIQ13045 1269 aa18.22■□□□□ 0.51
TRAFD1-201ENST00000257604 PKNOX2Q96KN3 472 aa18.22■□□□□ 0.51
TRAFD1-201ENST00000257604 ARHGAP45Q92619 1136 aa18.22■□□□□ 0.51
TRAFD1-201ENST00000257604 PIK3R4Q99570 1358 aa18.21■□□□□ 0.51
TRAFD1-201ENST00000257604 BTBD11A6QL63 1104 aa18.21■□□□□ 0.51
TRAFD1-201ENST00000257604 SLC39A6Q13433 755 aa18.21■□□□□ 0.51
TRAFD1-201ENST00000257604 PEAK1Q9H792 1746 aa18.21■□□□□ 0.51
TRAFD1-201ENST00000257604 ABCC4O15439 1325 aa18.21■□□□□ 0.51
TRAFD1-201ENST00000257604 PRAMEF22A3QJZ6 481 aa18.21■□□□□ 0.51
TRAFD1-201ENST00000257604 C19orf44Q9H6X5 657 aa18.2■□□□□ 0.5
TRAFD1-201ENST00000257604 ARHGEF10O15013 1369 aa18.2■□□□□ 0.5
TRAFD1-201ENST00000257604 CCDC30Q5VVM6 783 aa18.2■□□□□ 0.5
TRAFD1-201ENST00000257604 KCNH5Q8NCM2 988 aa18.2■□□□□ 0.5
TRAFD1-201ENST00000257604 CHMP4BQ9H444 224 aaKnown RBP18.2■□□□□ 0.5
TRAFD1-201ENST00000257604 KNDC1Q76NI1 1749 aa18.19■□□□□ 0.5
TRAFD1-201ENST00000257604 BECN1Q14457 450 aa18.19■□□□□ 0.5
TRAFD1-201ENST00000257604 DLG5Q8TDM6 1919 aa18.18■□□□□ 0.5
TRAFD1-201ENST00000257604 A0A0G2JS52 829 aa18.18■□□□□ 0.5
TRAFD1-201ENST00000257604 DNAJC5Q9H3Z4 198 aa18.18■□□□□ 0.5
TRAFD1-201ENST00000257604 CHPF2Q9P2E5 772 aa18.18■□□□□ 0.5
TRAFD1-201ENST00000257604 AKAP12Q02952 1782 aa18.18■□□□□ 0.5
TRAFD1-201ENST00000257604 MAP3K5Q99683 1374 aa18.17■□□□□ 0.5
TRAFD1-201ENST00000257604 TMEM94Q12767 1356 aa18.17■□□□□ 0.5
TRAFD1-201ENST00000257604 PLEKHO1Q53GL0 409 aaPredicted RBP18.17■□□□□ 0.5
TRAFD1-201ENST00000257604 CEP85Q6P2H3 762 aa18.16■□□□□ 0.5
TRAFD1-201ENST00000257604 GCC1Q96CN9 775 aa18.16■□□□□ 0.5
TRAFD1-201ENST00000257604 CRB1P82279 1406 aa18.16■□□□□ 0.5
TRAFD1-201ENST00000257604 HSP90AA1P07900 732 aaKnown RBP18.16■□□□□ 0.5
TRAFD1-201ENST00000257604 RAPGEF4Q8WZA2 1011 aa18.16■□□□□ 0.5
TRAFD1-201ENST00000257604 IL1RAPL2Q9NP60 686 aa18.16■□□□□ 0.5
TRAFD1-201ENST00000257604 LRRFIP2Q9Y608 721 aaKnown RBP18.16■□□□□ 0.5
TRAFD1-201ENST00000257604 MYL6BP14649 208 aa18.15■□□□□ 0.5
TRAFD1-201ENST00000257604 INTS3Q68E01 1043 aaKnown RBP18.14■□□□□ 0.49
TRAFD1-201ENST00000257604 ARHGEF25Q86VW2 580 aa18.14■□□□□ 0.49
TRAFD1-201ENST00000257604 RBM42Q9BTD8 480 aaKnown RBP18.14■□□□□ 0.49
TRAFD1-201ENST00000257604 JARID2Q92833 1246 aaPredicted RBP18.14■□□□□ 0.49
TRAFD1-201ENST00000257604 TBC1D32Q96NH3 1257 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms