RNA–Protein interactions for RNA: ENST00000257013.8

RTL8C-201, Transcript of retrotransposon Gag like 8C, humanhuman

APPRIS P1 BASIC

Gene RTL8C, Length 1,181 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8C-201ENST00000257013 RGPD1P0DJD0 1748 aa29.55■■■□□ 2.32
RTL8C-201ENST00000257013 COL3A1P02461 1466 aaPredicted RBP29.55■■■□□ 2.32
RTL8C-201ENST00000257013 SF3B2Q13435 895 aaKnown RBP29.52■■■□□ 2.32
RTL8C-201ENST00000257013 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.5■■■□□ 2.31
RTL8C-201ENST00000257013 KDRP35968 1356 aa29.5■■■□□ 2.31
RTL8C-201ENST00000257013 PKD1L3Q7Z443 1732 aa29.49■■■□□ 2.31
RTL8C-201ENST00000257013 SHANK3Q9BYB0 1731 aa29.49■■■□□ 2.31
RTL8C-201ENST00000257013 DDX54Q8TDD1 881 aaKnown RBP29.49■■■□□ 2.31
RTL8C-201ENST00000257013 PCDH11XQ9BZA7 1347 aa29.48■■■□□ 2.31
RTL8C-201ENST00000257013 PCDH11YQ9BZA8 1340 aa29.48■■■□□ 2.31
RTL8C-201ENST00000257013 SULT6B1Q6IMI4 303 aa29.48■■■□□ 2.31
RTL8C-201ENST00000257013 SPG7Q9UQ90 795 aa29.48■■■□□ 2.31
RTL8C-201ENST00000257013 TRIM37O94972 964 aa29.47■■■□□ 2.31
RTL8C-201ENST00000257013 SBF2Q86WG5 1849 aa29.46■■■□□ 2.31
RTL8C-201ENST00000257013 AEBP1Q8IUX7 1158 aa29.45■■■□□ 2.31
RTL8C-201ENST00000257013 NUDCQ9Y266 331 aa29.45■■■□□ 2.31
RTL8C-201ENST00000257013 MYBBP1AQ9BQG0 1328 aaKnown RBP29.45■■■□□ 2.3
RTL8C-201ENST00000257013 TNS1Q9HBL0 1735 aaKnown RBP29.44■■■□□ 2.3
RTL8C-201ENST00000257013 PRKRIP1Q9H875 184 aaPredicted RBP29.43■■■□□ 2.3
RTL8C-201ENST00000257013 U2SURPO15042 1029 aaKnown RBP29.42■■■□□ 2.3
RTL8C-201ENST00000257013 BAG6P46379 1132 aa29.42■■■□□ 2.3
RTL8C-201ENST00000257013 BCL11BQ9C0K0 894 aaPredicted RBP29.42■■■□□ 2.3
RTL8C-201ENST00000257013 AMOTQ4VCS5 1084 aa29.41■■■□□ 2.3
RTL8C-201ENST00000257013 PLEKHO1Q53GL0 409 aaPredicted RBP29.41■■■□□ 2.3
RTL8C-201ENST00000257013 CYP27B1O15528 508 aa29.4■■■□□ 2.3
RTL8C-201ENST00000257013 HMOX1P09601 288 aa29.39■■■□□ 2.3
RTL8C-201ENST00000257013 NHSQ6T4R5 1651 aa29.38■■■□□ 2.29
RTL8C-201ENST00000257013 APBA3O96018 575 aa29.37■■■□□ 2.29
RTL8C-201ENST00000257013 IFNL2Q8IZJ0 200 aa29.37■■■□□ 2.29
RTL8C-201ENST00000257013 DEFB132Q7Z7B7 95 aa29.36■■■□□ 2.29
RTL8C-201ENST00000257013 ACSBG1Q96GR2 724 aa29.36■■■□□ 2.29
RTL8C-201ENST00000257013 NKX1-1Q15270 411 aaPredicted RBP29.35■■■□□ 2.29
RTL8C-201ENST00000257013 PHKG2P15735 406 aa29.34■■■□□ 2.29
RTL8C-201ENST00000257013 KCNQ2O43526 872 aa29.33■■■□□ 2.29
RTL8C-201ENST00000257013 U2AF1L5P0DN76 240 aaPredicted RBP29.33■■■□□ 2.29
RTL8C-201ENST00000257013 U2AF1Q01081 240 aaKnown RBP eCLIP29.33■■■□□ 2.29
RTL8C-201ENST00000257013 KAT6BQ8WYB5 2073 aa29.32■■■□□ 2.28
RTL8C-201ENST00000257013 DOT1LQ8TEK3 1739 aa29.32■■■□□ 2.28
RTL8C-201ENST00000257013 ZNF530Q6P9A1 599 aaPredicted RBP29.31■■■□□ 2.28
RTL8C-201ENST00000257013 PTF1AQ7RTS3 328 aa29.31■■■□□ 2.28
RTL8C-201ENST00000257013 PLSCR1O15162 318 aa29.3■■■□□ 2.28
RTL8C-201ENST00000257013 HSP90AB1P08238 724 aaKnown RBP29.3■■■□□ 2.28
RTL8C-201ENST00000257013 EN1Q05925 392 aaPredicted RBP29.3■■■□□ 2.28
RTL8C-201ENST00000257013 FCHSD2O94868 740 aa29.29■■■□□ 2.28
RTL8C-201ENST00000257013 PRIM1P49642 420 aaKnown RBP29.29■■■□□ 2.28
RTL8C-201ENST00000257013 C1orf141Q5JVX7 400 aa29.29■■■□□ 2.28
RTL8C-201ENST00000257013 CAMKK2Q96RR4 588 aa29.29■■■□□ 2.28
RTL8C-201ENST00000257013 RSPH6AQ9H0K4 717 aa29.29■■■□□ 2.28
RTL8C-201ENST00000257013 ANP32CO43423 234 aa29.28■■■□□ 2.28
RTL8C-201ENST00000257013 RGPD3A6NKT7 1758 aaPredicted RBP29.28■■■□□ 2.28
RTL8C-201ENST00000257013 RGPD4Q7Z3J3 1758 aa29.28■■■□□ 2.28
RTL8C-201ENST00000257013 SYTL4Q96C24 671 aaPredicted RBP29.27■■■□□ 2.28
RTL8C-201ENST00000257013 BTAF1O14981 1849 aa29.26■■■□□ 2.27
RTL8C-201ENST00000257013 PRKAR2BP31323 418 aa29.25■■■□□ 2.27
RTL8C-201ENST00000257013 EZH2Q15910 746 aaKnown RBP29.25■■■□□ 2.27
RTL8C-201ENST00000257013 AKAP4Q5JQC9 854 aa29.25■■■□□ 2.27
RTL8C-201ENST00000257013 DCAF5Q96JK2 942 aa29.25■■■□□ 2.27
RTL8C-201ENST00000257013 MTHFSDQ2M296 383 aaKnown RBP29.24■■■□□ 2.27
RTL8C-201ENST00000257013 TOGARAM1Q9Y4F4 1720 aa29.24■■■□□ 2.27
RTL8C-201ENST00000257013 GAS2L2Q8NHY3 880 aa29.22■■■□□ 2.27
RTL8C-201ENST00000257013 PNNQ9H307 717 aaKnown RBP29.21■■■□□ 2.27
RTL8C-201ENST00000257013 ITGB4P16144 1822 aa29.2■■■□□ 2.27
RTL8C-201ENST00000257013 ERVV-2B6SEH9 535 aa29.2■■■□□ 2.26
RTL8C-201ENST00000257013 RREB1Q92766 1687 aa29.19■■■□□ 2.26
RTL8C-201ENST00000257013 KDM6AO15550 1401 aaPredicted RBP29.19■■■□□ 2.26
RTL8C-201ENST00000257013 MPRIPQ6WCQ1 1025 aa29.18■■■□□ 2.26
RTL8C-201ENST00000257013 PHACTR3Q96KR7 559 aa29.18■■■□□ 2.26
RTL8C-201ENST00000257013 NEFMP07197 916 aa29.17■■■□□ 2.26
RTL8C-201ENST00000257013 TMOD3Q9NYL9 352 aa29.17■■■□□ 2.26
RTL8C-201ENST00000257013 WDR43Q15061 677 aaKnown RBP eCLIP29.15■■■□□ 2.26
RTL8C-201ENST00000257013 PIGBQ92521 554 aa29.15■■■□□ 2.26
RTL8C-201ENST00000257013 SCN11AQ9UI33 1791 aa29.14■■■□□ 2.26
RTL8C-201ENST00000257013 TXNRD1Q16881 649 aa29.14■■■□□ 2.26
RTL8C-201ENST00000257013 MAP3K5Q99683 1374 aa29.13■■■□□ 2.25
RTL8C-201ENST00000257013 PROM2Q8N271 834 aa29.13■■■□□ 2.25
RTL8C-201ENST00000257013 PLEKHF1Q96S99 279 aa29.13■■■□□ 2.25
RTL8C-201ENST00000257013 NUP188Q5SRE5 1749 aa29.13■■■□□ 2.25
RTL8C-201ENST00000257013 GNAT3A8MTJ3 354 aa29.12■■■□□ 2.25
RTL8C-201ENST00000257013 CABP4P57796 275 aa29.12■■■□□ 2.25
RTL8C-201ENST00000257013 SMARCC1Q92922 1105 aaPredicted RBP29.12■■■□□ 2.25
RTL8C-201ENST00000257013 ADAMTS7Q9UKP4 1686 aa29.12■■■□□ 2.25
RTL8C-201ENST00000257013 RNMTO43148 476 aaKnown RBP29.11■■■□□ 2.25
RTL8C-201ENST00000257013 SLC27A3Q5K4L6 730 aa29.1■■■□□ 2.25
RTL8C-201ENST00000257013 LY75O60449 1722 aa29.09■■■□□ 2.25
RTL8C-201ENST00000257013 LGR6Q9HBX8 967 aa29.09■■■□□ 2.25
RTL8C-201ENST00000257013 MAPK8IP3Q9UPT6 1336 aa29.09■■■□□ 2.25
RTL8C-201ENST00000257013 VIRMAQ69YN4 1812 aaKnown RBP29.08■■■□□ 2.25
RTL8C-201ENST00000257013 MRC1P22897 1456 aa29.07■■■□□ 2.24
RTL8C-201ENST00000257013 NBPF14Q5TI25 921 aa29.07■■■□□ 2.24
RTL8C-201ENST00000257013 PALLDQ8WX93 1383 aa29.07■■■□□ 2.24
RTL8C-201ENST00000257013 NFATC2IPQ8NCF5 419 aa29.06■■■□□ 2.24
RTL8C-201ENST00000257013 SLC52A2Q9HAB3 445 aa29.06■■■□□ 2.24
RTL8C-201ENST00000257013 ADAMTS8Q9UP79 889 aa29.06■■■□□ 2.24
RTL8C-201ENST00000257013 HTATSF1O43719 755 aaKnown RBP29.05■■■□□ 2.24
RTL8C-201ENST00000257013 HMGB2P26583 209 aaKnown RBP29.04■■■□□ 2.24
RTL8C-201ENST00000257013 CCDC184Q52MB2 194 aa29.04■■■□□ 2.24
RTL8C-201ENST00000257013 NFE2L2Q16236 605 aa29.03■■■□□ 2.24
RTL8C-201ENST00000257013 IL17REQ8NFR9 667 aa29.03■■■□□ 2.24
RTL8C-201ENST00000257013 RTF1Q92541 710 aaKnown RBP29.03■■■□□ 2.24
RTL8C-201ENST00000257013 MRS2Q9HD23 443 aa29.03■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms