RNA–Protein interactions for RNA: ENST00000255622.10

PDE6B-201, Transcript of phosphodiesterase 6B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDE6B, Length 3,280 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-201ENST00000255622 PPP6R1Q9UPN7 881 aa14.04□□□□□ -0.16
PDE6B-201ENST00000255622 SOX12O15370 315 aa14.04□□□□□ -0.16
PDE6B-201ENST00000255622 BRPF1P55201 1214 aaPredicted RBP14.04□□□□□ -0.16
PDE6B-201ENST00000255622 PTCH1Q13635 1447 aa14.04□□□□□ -0.16
PDE6B-201ENST00000255622 RGS22Q8NE09 1264 aa14.03□□□□□ -0.16
PDE6B-201ENST00000255622 AATKQ6ZMQ8 1374 aa14.03□□□□□ -0.16
PDE6B-201ENST00000255622 MON2Q7Z3U7 1717 aa14.03□□□□□ -0.16
PDE6B-201ENST00000255622 TMED8Q6PL24 325 aaPredicted RBP14.03□□□□□ -0.16
PDE6B-201ENST00000255622 SMAP1Q8IYB5 467 aaPredicted RBP14.03□□□□□ -0.16
PDE6B-201ENST00000255622 ZNF428Q96B54 188 aa14.03□□□□□ -0.16
PDE6B-201ENST00000255622 ESF1Q9H501 851 aaKnown RBP14.03□□□□□ -0.16
PDE6B-201ENST00000255622 ABCC4O15439 1325 aa14.03□□□□□ -0.16
PDE6B-201ENST00000255622 ROBO2Q9HCK4 1378 aa14.02□□□□□ -0.16
PDE6B-201ENST00000255622 TPM2P07951 284 aa14.02□□□□□ -0.17
PDE6B-201ENST00000255622 SULT6B1Q6IMI4 303 aa14.02□□□□□ -0.17
PDE6B-201ENST00000255622 C3P01024 1663 aa14.01□□□□□ -0.17
PDE6B-201ENST00000255622 PIK3R4Q99570 1358 aa14.01□□□□□ -0.17
PDE6B-201ENST00000255622 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.01□□□□□ -0.17
PDE6B-201ENST00000255622 ARHGAP45Q92619 1136 aa14.01□□□□□ -0.17
PDE6B-201ENST00000255622 EIF4A2Q14240 407 aaKnown RBP14.01□□□□□ -0.17
PDE6B-201ENST00000255622 MCM10Q7L590 875 aa14.01□□□□□ -0.17
PDE6B-201ENST00000255622 ITSN1Q15811 1721 aa14□□□□□ -0.17
PDE6B-201ENST00000255622 AKAP12Q02952 1782 aa14□□□□□ -0.17
PDE6B-201ENST00000255622 MYCNP04198 464 aaPredicted RBP13.99□□□□□ -0.17
PDE6B-201ENST00000255622 BMP2KLQ5H9B9 411 aa13.99□□□□□ -0.17
PDE6B-201ENST00000255622 HSCBQ8IWL3 235 aa13.99□□□□□ -0.17
PDE6B-201ENST00000255622 GZF1Q9H116 711 aaPredicted RBP13.99□□□□□ -0.17
PDE6B-201ENST00000255622 KNDC1Q76NI1 1749 aa13.99□□□□□ -0.17
PDE6B-201ENST00000255622 HSP90AB2PQ58FF8 381 aa13.99□□□□□ -0.17
PDE6B-201ENST00000255622 GCC1Q96CN9 775 aa13.99□□□□□ -0.17
PDE6B-201ENST00000255622 LMOD3Q0VAK6 560 aa13.98□□□□□ -0.17
PDE6B-201ENST00000255622 HDAC5Q9UQL6 1122 aa13.98□□□□□ -0.17
PDE6B-201ENST00000255622 ACEP12821 1306 aa13.98□□□□□ -0.17
PDE6B-201ENST00000255622 RBM25P49756 843 aaKnown RBP13.98□□□□□ -0.17
PDE6B-201ENST00000255622 FAM193AP78312 1265 aa13.98□□□□□ -0.17
PDE6B-201ENST00000255622 MCM4P33991 863 aa13.98□□□□□ -0.17
PDE6B-201ENST00000255622 TBC1D9Q6ZT07 1266 aa13.98□□□□□ -0.17
PDE6B-201ENST00000255622 TECPR2O15040 1411 aa13.98□□□□□ -0.17
PDE6B-201ENST00000255622 CD2BP2O95400 341 aaKnown RBP13.97□□□□□ -0.17
PDE6B-201ENST00000255622 TTC21BQ7Z4L5 1316 aa13.97□□□□□ -0.17
PDE6B-201ENST00000255622 KIF2CQ99661 725 aa13.97□□□□□ -0.17
PDE6B-201ENST00000255622 MIS18AQ9NYP9 233 aa13.97□□□□□ -0.17
PDE6B-201ENST00000255622 CHMP5Q9NZZ3 219 aa13.97□□□□□ -0.17
PDE6B-201ENST00000255622 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.97□□□□□ -0.17
PDE6B-201ENST00000255622 TNRQ92752 1358 aa13.97□□□□□ -0.17
PDE6B-201ENST00000255622 L1TD1Q5T7N2 865 aaKnown RBP13.96□□□□□ -0.17
PDE6B-201ENST00000255622 KIAA1211Q6ZU35 1233 aa13.96□□□□□ -0.17
PDE6B-201ENST00000255622 RBM42Q9BTD8 480 aaKnown RBP13.96□□□□□ -0.17
PDE6B-201ENST00000255622 ZNF692Q9BU19 519 aaPredicted RBP13.96□□□□□ -0.17
PDE6B-201ENST00000255622 FOXD4L1Q9NU39 408 aa13.96□□□□□ -0.17
PDE6B-201ENST00000255622 CHMP4CQ96CF2 233 aa13.96□□□□□ -0.17
PDE6B-201ENST00000255622 TAOK2Q9UL54 1235 aa13.96□□□□□ -0.17
PDE6B-201ENST00000255622 TMEM2Q9UHN6 1383 aa13.96□□□□□ -0.17
PDE6B-201ENST00000255622 LTKP29376 864 aa13.96□□□□□ -0.18
PDE6B-201ENST00000255622 C16orf71Q8IYS4 520 aaPredicted RBP13.96□□□□□ -0.18
PDE6B-201ENST00000255622 SLC26A8Q96RN1 970 aa13.96□□□□□ -0.18
PDE6B-201ENST00000255622 API5Q9BZZ5 524 aaKnown RBP13.96□□□□□ -0.18
PDE6B-201ENST00000255622 PEAK1Q9H792 1746 aa13.95□□□□□ -0.18
PDE6B-201ENST00000255622 GSPT1P15170 499 aaKnown RBP13.95□□□□□ -0.18
PDE6B-201ENST00000255622 NRKQ7Z2Y5 1582 aa13.95□□□□□ -0.18
PDE6B-201ENST00000255622 ADAMTS13Q76LX8 1427 aa13.95□□□□□ -0.18
PDE6B-201ENST00000255622 APBB1O00213 710 aa13.95□□□□□ -0.18
PDE6B-201ENST00000255622 FOXO3O43524 673 aa13.95□□□□□ -0.18
PDE6B-201ENST00000255622 ZBTB9Q96C00 473 aa13.95□□□□□ -0.18
PDE6B-201ENST00000255622 UBR1Q8IWV7 1749 aa13.94□□□□□ -0.18
PDE6B-201ENST00000255622 CEBPAP49715 358 aaPredicted RBP13.94□□□□□ -0.18
PDE6B-201ENST00000255622 OTUD7AQ8TE49 926 aaPredicted RBP13.94□□□□□ -0.18
PDE6B-201ENST00000255622 RGS12O14924 1447 aa13.94□□□□□ -0.18
PDE6B-201ENST00000255622 SIRT1Q96EB6 747 aa13.93□□□□□ -0.18
PDE6B-201ENST00000255622 RIMS1Q86UR5 1692 aaKnown RBP13.93□□□□□ -0.18
PDE6B-201ENST00000255622 OVOS2A0A0J9YW53 1432 aa13.93□□□□□ -0.18
PDE6B-201ENST00000255622 OVOS2Q6IE36 1432 aa13.93□□□□□ -0.18
PDE6B-201ENST00000255622 HDGFP51858 240 aaKnown RBP13.93□□□□□ -0.18
PDE6B-201ENST00000255622 MSH6P52701 1360 aa13.93□□□□□ -0.18
PDE6B-201ENST00000255622 NCOA3Q9Y6Q9 1424 aa13.93□□□□□ -0.18
PDE6B-201ENST00000255622 CHL1O00533 1208 aa13.92□□□□□ -0.18
PDE6B-201ENST00000255622 HSP90AB1P08238 724 aaKnown RBP13.92□□□□□ -0.18
PDE6B-201ENST00000255622 DDIT3P35638 169 aa13.92□□□□□ -0.18
PDE6B-201ENST00000255622 TPRNQ4KMQ1 711 aa13.92□□□□□ -0.18
PDE6B-201ENST00000255622 PLEKHM2Q8IWE5 1019 aa13.92□□□□□ -0.18
PDE6B-201ENST00000255622 USP6P35125 1406 aa13.92□□□□□ -0.18
PDE6B-201ENST00000255622 SMARCA5O60264 1052 aaPredicted RBP13.91□□□□□ -0.18
PDE6B-201ENST00000255622 DMTNQ08495 405 aa13.91□□□□□ -0.18
PDE6B-201ENST00000255622 CGNQ9P2M7 1197 aaKnown RBP13.91□□□□□ -0.18
PDE6B-201ENST00000255622 ATP10DQ9P241 1426 aa13.91□□□□□ -0.18
PDE6B-201ENST00000255622 TRAK2O60296 914 aa13.91□□□□□ -0.18
PDE6B-201ENST00000255622 INTS3Q68E01 1043 aaKnown RBP13.91□□□□□ -0.18
PDE6B-201ENST00000255622 SNX21Q969T3 373 aa13.91□□□□□ -0.18
PDE6B-201ENST00000255622 MEIS3Q99687 375 aa13.91□□□□□ -0.18
PDE6B-201ENST00000255622 KIF13AQ9H1H9 1805 aa13.91□□□□□ -0.18
PDE6B-201ENST00000255622 MAP3K19Q56UN5 1328 aa13.91□□□□□ -0.18
PDE6B-201ENST00000255622 PTPRUQ92729 1446 aa13.91□□□□□ -0.18
PDE6B-201ENST00000255622 PANK2Q9BZ23 570 aa13.9□□□□□ -0.18
PDE6B-201ENST00000255622 DCTPP1Q9H773 170 aa13.9□□□□□ -0.18
PDE6B-201ENST00000255622 TOPAZ1Q8N9V7 1692 aa13.9□□□□□ -0.18
PDE6B-201ENST00000255622 TNPO1Q92973 898 aaKnown RBP13.89□□□□□ -0.19
PDE6B-201ENST00000255622 CDC45O75419 566 aa13.89□□□□□ -0.19
PDE6B-201ENST00000255622 SLC4A2P04920 1241 aa13.89□□□□□ -0.19
PDE6B-201ENST00000255622 MTHFSDQ2M296 383 aaKnown RBP13.89□□□□□ -0.19
PDE6B-201ENST00000255622 CEP85Q6P2H3 762 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms