RNA–Protein interactions for RNA: ENST00000253925.11

PPFIA1-201, Transcript of PTPRF interacting protein alpha 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPFIA1, Length 5,234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-201ENST00000253925 ZNF518AQ6AHZ1 1483 aa22.97■■□□□ 1.27
PPFIA1-201ENST00000253925 PDIA4P13667 645 aaKnown RBP22.96■■□□□ 1.27
PPFIA1-201ENST00000253925 GOLGA6L1Q8N7Z2 621 aa22.96■■□□□ 1.27
PPFIA1-201ENST00000253925 KDM2BQ8NHM5 1336 aa22.96■■□□□ 1.27
PPFIA1-201ENST00000253925 TRIM5Q9C035 493 aa22.96■■□□□ 1.27
PPFIA1-201ENST00000253925 CCDC192P0DO97 292 aa22.96■■□□□ 1.27
PPFIA1-201ENST00000253925 ADGBQ8N7X0 1667 aa22.96■■□□□ 1.27
PPFIA1-201ENST00000253925 CWC27Q6UX04 472 aaKnown RBP22.95■■□□□ 1.27
PPFIA1-201ENST00000253925 ZSCAN30Q86W11 494 aa22.95■■□□□ 1.27
PPFIA1-201ENST00000253925 TTC21BQ7Z4L5 1316 aa22.95■■□□□ 1.26
PPFIA1-201ENST00000253925 TPM1P09493 284 aa22.95■■□□□ 1.26
PPFIA1-201ENST00000253925 NFXL1Q6ZNB6 911 aa22.95■■□□□ 1.26
PPFIA1-201ENST00000253925 TAF7Q15545 349 aaPredicted RBP22.95■■□□□ 1.26
PPFIA1-201ENST00000253925 AACSQ86V21 672 aa22.95■■□□□ 1.26
PPFIA1-201ENST00000253925 WDR7Q9Y4E6 1490 aa22.95■■□□□ 1.26
PPFIA1-201ENST00000253925 TATP17735 454 aaPredicted RBP22.95■■□□□ 1.26
PPFIA1-201ENST00000253925 BTBD11A6QL63 1104 aa22.94■■□□□ 1.26
PPFIA1-201ENST00000253925 LARP1BQ659C4 914 aaKnown RBP22.94■■□□□ 1.26
PPFIA1-201ENST00000253925 F6X3S4 739 aa22.94■■□□□ 1.26
PPFIA1-201ENST00000253925 KINO60870 393 aaKnown RBP22.94■■□□□ 1.26
PPFIA1-201ENST00000253925 BLOC1S2Q6QNY1 142 aa22.94■■□□□ 1.26
PPFIA1-201ENST00000253925 PDRG1Q9NUG6 133 aa22.94■■□□□ 1.26
PPFIA1-201ENST00000253925 MAST1Q9Y2H9 1570 aa22.94■■□□□ 1.26
PPFIA1-201ENST00000253925 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.94■■□□□ 1.26
PPFIA1-201ENST00000253925 GLRX3O76003 335 aaKnown RBP22.94■■□□□ 1.26
PPFIA1-201ENST00000253925 TNNQ9UQP3 1299 aa22.94■■□□□ 1.26
PPFIA1-201ENST00000253925 NUTM1Q86Y26 1132 aa22.93■■□□□ 1.26
PPFIA1-201ENST00000253925 JAKMIP1Q96N16 626 aaKnown RBP22.93■■□□□ 1.26
PPFIA1-201ENST00000253925 SAFBQ15424 915 aaKnown RBP eCLIP22.93■■□□□ 1.26
PPFIA1-201ENST00000253925 TTC22Q5TAA0 569 aa22.93■■□□□ 1.26
PPFIA1-201ENST00000253925 ASXL2Q76L83 1435 aa22.93■■□□□ 1.26
PPFIA1-201ENST00000253925 HOMER1Q86YM7 354 aa22.93■■□□□ 1.26
PPFIA1-201ENST00000253925 KDM6BO15054 1643 aa22.92■■□□□ 1.26
PPFIA1-201ENST00000253925 UPF3BQ9BZI7 483 aaKnown RBP22.92■■□□□ 1.26
PPFIA1-201ENST00000253925 SIL1Q9H173 461 aa22.92■■□□□ 1.26
PPFIA1-201ENST00000253925 SMC5Q8IY18 1101 aa22.91■■□□□ 1.26
PPFIA1-201ENST00000253925 FAM83GA6ND36 823 aa22.91■■□□□ 1.26
PPFIA1-201ENST00000253925 TSR1Q2NL82 804 aaKnown RBP22.91■■□□□ 1.26
PPFIA1-201ENST00000253925 ZNF396Q96N95 335 aaPredicted RBP22.91■■□□□ 1.26
PPFIA1-201ENST00000253925 SYCE3A1L190 88 aa22.9■■□□□ 1.26
PPFIA1-201ENST00000253925 ERICH2A1L162 156 aa22.9■■□□□ 1.26
PPFIA1-201ENST00000253925 SNX21Q969T3 373 aa22.9■■□□□ 1.26
PPFIA1-201ENST00000253925 ABCC10Q5T3U5 1492 aa22.9■■□□□ 1.26
PPFIA1-201ENST00000253925 ABCC2Q92887 1545 aa22.9■■□□□ 1.26
PPFIA1-201ENST00000253925 DHX16O60231 1041 aaKnown RBP22.9■■□□□ 1.26
PPFIA1-201ENST00000253925 FLIIQ13045 1269 aa22.9■■□□□ 1.26
PPFIA1-201ENST00000253925 MRPL50Q8N5N7 158 aaKnown RBP22.9■■□□□ 1.26
PPFIA1-201ENST00000253925 FBXW7Q969H0 707 aa22.89■■□□□ 1.26
PPFIA1-201ENST00000253925 KCNH5Q8NCM2 988 aa22.89■■□□□ 1.25
PPFIA1-201ENST00000253925 POGZQ7Z3K3 1410 aa22.88■■□□□ 1.25
PPFIA1-201ENST00000253925 KRT32Q14532 448 aa22.88■■□□□ 1.25
PPFIA1-201ENST00000253925 TNMDQ9H2S6 317 aa22.88■■□□□ 1.25
PPFIA1-201ENST00000253925 ZBTB40Q9NUA8 1239 aa22.88■■□□□ 1.25
PPFIA1-201ENST00000253925 TARBP1Q13395 1621 aaKnown RBP22.88■■□□□ 1.25
PPFIA1-201ENST00000253925 BAG4O95429 457 aaKnown RBP22.88■■□□□ 1.25
PPFIA1-201ENST00000253925 LRRFIP2Q9Y608 721 aaKnown RBP22.88■■□□□ 1.25
PPFIA1-201ENST00000253925 PES1O00541 588 aaKnown RBP22.87■■□□□ 1.25
PPFIA1-201ENST00000253925 FBLN1P23142 703 aa22.87■■□□□ 1.25
PPFIA1-201ENST00000253925 PROSER2Q86WR7 435 aaPredicted RBP22.87■■□□□ 1.25
PPFIA1-201ENST00000253925 CASTP20810 708 aaKnown RBP22.87■■□□□ 1.25
PPFIA1-201ENST00000253925 POLKQ9UBT6 870 aa22.87■■□□□ 1.25
PPFIA1-201ENST00000253925 SPG7Q9UQ90 795 aa22.87■■□□□ 1.25
PPFIA1-201ENST00000253925 ARHGEF5Q12774 1597 aa22.87■■□□□ 1.25
PPFIA1-201ENST00000253925 KLHL40Q2TBA0 621 aa22.86■■□□□ 1.25
PPFIA1-201ENST00000253925 CCAR2Q8N163 923 aaKnown RBP22.86■■□□□ 1.25
PPFIA1-201ENST00000253925 ANKRD44Q8N8A2 993 aa22.86■■□□□ 1.25
PPFIA1-201ENST00000253925 ANKRD20A12PQ8NF67 263 aa22.86■■□□□ 1.25
PPFIA1-201ENST00000253925 STK3Q13188 491 aa22.86■■□□□ 1.25
PPFIA1-201ENST00000253925 SEC24BO95487 1268 aa22.85■■□□□ 1.25
PPFIA1-201ENST00000253925 ANKLE2Q86XL3 938 aa22.85■■□□□ 1.25
PPFIA1-201ENST00000253925 KDM5CP41229 1560 aa22.84■■□□□ 1.25
PPFIA1-201ENST00000253925 VAMP4O75379 141 aa22.84■■□□□ 1.25
PPFIA1-201ENST00000253925 MYL6BP14649 208 aa22.84■■□□□ 1.25
PPFIA1-201ENST00000253925 ZMYND15Q9H091 742 aa22.84■■□□□ 1.25
PPFIA1-201ENST00000253925 A0A1W2PP64 1363 aa22.84■■□□□ 1.25
PPFIA1-201ENST00000253925 SYTL4Q96C24 671 aaPredicted RBP22.84■■□□□ 1.25
PPFIA1-201ENST00000253925 TBC1D2BQ9UPU7 963 aa22.84■■□□□ 1.25
PPFIA1-201ENST00000253925 CCDC158Q5M9N0 1113 aa22.83■■□□□ 1.25
PPFIA1-201ENST00000253925 SPC24Q8NBT2 197 aa22.83■■□□□ 1.25
PPFIA1-201ENST00000253925 DNAAF4Q8WXU2 420 aa22.83■■□□□ 1.25
PPFIA1-201ENST00000253925 ZFYVE9O95405 1425 aa22.83■■□□□ 1.25
PPFIA1-201ENST00000253925 OLFM4Q6UX06 510 aa22.83■■□□□ 1.25
PPFIA1-201ENST00000253925 STK38Q15208 465 aa22.83■■□□□ 1.24
PPFIA1-201ENST00000253925 C8orf58Q8NAV2 365 aa22.83■■□□□ 1.24
PPFIA1-201ENST00000253925 SPATA32Q96LK8 384 aa22.83■■□□□ 1.24
PPFIA1-201ENST00000253925 NUP62CLQ9H1M0 184 aa22.83■■□□□ 1.24
PPFIA1-201ENST00000253925 AMOTL2Q9Y2J4 779 aa22.83■■□□□ 1.24
PPFIA1-201ENST00000253925 ACEP12821 1306 aa22.82■■□□□ 1.24
PPFIA1-201ENST00000253925 NCBP3Q53F19 620 aaKnown RBP22.82■■□□□ 1.24
PPFIA1-201ENST00000253925 SH2B1Q9NRF2 756 aaPredicted RBP22.82■■□□□ 1.24
PPFIA1-201ENST00000253925 SDSP20132 328 aa22.82■■□□□ 1.24
PPFIA1-201ENST00000253925 CABP4P57796 275 aa22.82■■□□□ 1.24
PPFIA1-201ENST00000253925 CEBPZQ03701 1054 aaKnown RBP22.82■■□□□ 1.24
PPFIA1-201ENST00000253925 CFAP45Q9UL16 551 aa22.82■■□□□ 1.24
PPFIA1-201ENST00000253925 VPS37DQ86XT2 251 aa22.81■■□□□ 1.24
PPFIA1-201ENST00000253925 GPS2Q13227 327 aa22.81■■□□□ 1.24
PPFIA1-201ENST00000253925 AMOTQ4VCS5 1084 aa22.81■■□□□ 1.24
PPFIA1-201ENST00000253925 TMX4Q9H1E5 349 aaPredicted RBP22.81■■□□□ 1.24
PPFIA1-201ENST00000253925 MEIS3Q99687 375 aa22.81■■□□□ 1.24
PPFIA1-201ENST00000253925 TEX35Q5T0J7 233 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms