RNA–Protein interactions for RNA: ENST00000253408.10

GFAP-201, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5 BASIC

Gene GFAP, Length 3,135 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-201ENST00000253408 TRIM6-TRIM34B2RNG4 842 aa16.98■□□□□ 0.31
GFAP-201ENST00000253408 PRIM1P49642 420 aaKnown RBP16.98■□□□□ 0.31
GFAP-201ENST00000253408 CEP85Q6P2H3 762 aa16.98■□□□□ 0.31
GFAP-201ENST00000253408 MPNDQ8N594 471 aa16.98■□□□□ 0.31
GFAP-201ENST00000253408 MLH3Q9UHC1 1453 aa16.98■□□□□ 0.31
GFAP-201ENST00000253408 ZNF853P0CG23 659 aa16.98■□□□□ 0.31
GFAP-201ENST00000253408 BRPF1P55201 1214 aaPredicted RBP16.98■□□□□ 0.31
GFAP-201ENST00000253408 ZSCAN30Q86W11 494 aa16.98■□□□□ 0.31
GFAP-201ENST00000253408 RBSNQ9H1K0 784 aa16.98■□□□□ 0.31
GFAP-201ENST00000253408 R3HCC1Q9Y3T6 440 aaKnown RBP16.98■□□□□ 0.31
GFAP-201ENST00000253408 SYCE3A1L190 88 aa16.97■□□□□ 0.31
GFAP-201ENST00000253408 ANKRD44Q8N8A2 993 aa16.97■□□□□ 0.31
GFAP-201ENST00000253408 MSH6P52701 1360 aa16.97■□□□□ 0.31
GFAP-201ENST00000253408 NUDT16Q96DE0 195 aaKnown RBP16.96■□□□□ 0.31
GFAP-201ENST00000253408 LMBRD1Q9NUN5 540 aa16.96■□□□□ 0.31
GFAP-201ENST00000253408 RIMS2Q9UQ26 1411 aa16.96■□□□□ 0.31
GFAP-201ENST00000253408 REC8O95072 547 aa16.96■□□□□ 0.31
GFAP-201ENST00000253408 YEATS2Q9ULM3 1422 aa16.96■□□□□ 0.31
GFAP-201ENST00000253408 PIK3C2BO00750 1634 aa16.96■□□□□ 0.31
GFAP-201ENST00000253408 XPCQ01831 940 aaPredicted RBP16.96■□□□□ 0.31
GFAP-201ENST00000253408 RRP9O43818 475 aaKnown RBP16.95■□□□□ 0.3
GFAP-201ENST00000253408 WASLO00401 505 aaPredicted RBP16.94■□□□□ 0.3
GFAP-201ENST00000253408 ERC2O15083 957 aa16.94■□□□□ 0.3
GFAP-201ENST00000253408 ANO2Q9NQ90 1003 aa16.94■□□□□ 0.3
GFAP-201ENST00000253408 PTMAP06454 111 aaKnown RBP16.94■□□□□ 0.3
GFAP-201ENST00000253408 RPAP2Q8IXW5 612 aaPredicted RBP16.94■□□□□ 0.3
GFAP-201ENST00000253408 GPT2Q8TD30 523 aa16.93■□□□□ 0.3
GFAP-201ENST00000253408 MYO5BQ9ULV0 1848 aa16.93■□□□□ 0.3
GFAP-201ENST00000253408 PLPPR3Q6T4P5 718 aa16.93■□□□□ 0.3
GFAP-201ENST00000253408 G2E3Q7L622 706 aa16.93■□□□□ 0.3
GFAP-201ENST00000253408 GDPD2Q9HCC8 539 aa16.93■□□□□ 0.3
GFAP-201ENST00000253408 FAM13BQ9NYF5 915 aa16.93■□□□□ 0.3
GFAP-201ENST00000253408 NSFL1CQ9UNZ2 370 aaKnown RBP16.93■□□□□ 0.3
GFAP-201ENST00000253408 PIK3R4Q99570 1358 aa16.93■□□□□ 0.3
GFAP-201ENST00000253408 FOXO3O43524 673 aa16.92■□□□□ 0.3
GFAP-201ENST00000253408 HMMRO75330 724 aa16.92■□□□□ 0.3
GFAP-201ENST00000253408 EIF4A2Q14240 407 aaKnown RBP16.92■□□□□ 0.3
GFAP-201ENST00000253408 TSPYL4Q9UJ04 414 aa16.92■□□□□ 0.3
GFAP-201ENST00000253408 MAP2P11137 1827 aaKnown RBP16.92■□□□□ 0.3
GFAP-201ENST00000253408 RTF1Q92541 710 aaKnown RBP16.92■□□□□ 0.3
GFAP-201ENST00000253408 UPF3BQ9BZI7 483 aaKnown RBP16.92■□□□□ 0.3
GFAP-201ENST00000253408 HSP90AB2PQ58FF8 381 aa16.91■□□□□ 0.3
GFAP-201ENST00000253408 PPP1R9BQ96SB3 815 aa16.91■□□□□ 0.3
GFAP-201ENST00000253408 CWC22Q9HCG8 908 aaKnown RBP16.91■□□□□ 0.3
GFAP-201ENST00000253408 MAP4K4O95819 1239 aaPredicted RBP16.9■□□□□ 0.3
GFAP-201ENST00000253408 TMEM63CQ9P1W3 806 aa16.9■□□□□ 0.3
GFAP-201ENST00000253408 ZDHHC9Q9Y397 364 aa16.9■□□□□ 0.3
GFAP-201ENST00000253408 ARHGEF40Q8TER5 1519 aa16.9■□□□□ 0.3
GFAP-201ENST00000253408 TPM2P07951 284 aa16.9■□□□□ 0.3
GFAP-201ENST00000253408 TMX3Q96JJ7 454 aa16.9■□□□□ 0.3
GFAP-201ENST00000253408 CCDC61Q9Y6R9 512 aa16.9■□□□□ 0.3
GFAP-201ENST00000253408 RTL1A6NKG5 1358 aa16.89■□□□□ 0.29
GFAP-201ENST00000253408 DTNBO60941 627 aa16.89■□□□□ 0.29
GFAP-201ENST00000253408 PDE1AP54750 535 aa16.89■□□□□ 0.29
GFAP-201ENST00000253408 ZNF445P59923 1031 aa16.89■□□□□ 0.29
GFAP-201ENST00000253408 HAP1P54257 671 aaPredicted RBP16.88■□□□□ 0.29
GFAP-201ENST00000253408 FKBP5Q13451 457 aaPredicted RBP16.88■□□□□ 0.29
GFAP-201ENST00000253408 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.88■□□□□ 0.29
GFAP-201ENST00000253408 LARP6Q9BRS8 491 aaKnown RBP16.88■□□□□ 0.29
GFAP-201ENST00000253408 PLCB2Q00722 1185 aa16.88■□□□□ 0.29
GFAP-201ENST00000253408 OSCARQ8IYS5 282 aa16.88■□□□□ 0.29
GFAP-201ENST00000253408 ALKQ9UM73 1620 aa16.88■□□□□ 0.29
GFAP-201ENST00000253408 MCCP23508 829 aa16.87■□□□□ 0.29
GFAP-201ENST00000253408 ZMYND15Q9H091 742 aa16.87■□□□□ 0.29
GFAP-201ENST00000253408 IL1RAPL2Q9NP60 686 aa16.87■□□□□ 0.29
GFAP-201ENST00000253408 PALD1Q9ULE6 856 aa16.87■□□□□ 0.29
GFAP-201ENST00000253408 DNTTIP2Q5QJE6 756 aaKnown RBP16.87■□□□□ 0.29
GFAP-201ENST00000253408 STK31Q9BXU1 1019 aa16.87■□□□□ 0.29
GFAP-201ENST00000253408 ESF1Q9H501 851 aaKnown RBP16.87■□□□□ 0.29
GFAP-201ENST00000253408 KIF20BQ96Q89 1820 aa16.87■□□□□ 0.29
GFAP-201ENST00000253408 CYP2E1P05181 493 aaPredicted RBP16.86■□□□□ 0.29
GFAP-201ENST00000253408 EDC4Q6P2E9 1401 aaKnown RBP16.85■□□□□ 0.29
GFAP-201ENST00000253408 ATP10DQ9P241 1426 aa16.85■□□□□ 0.29
GFAP-201ENST00000253408 ANKRD26Q9UPS8 1709 aa16.85■□□□□ 0.29
GFAP-201ENST00000253408 CHL1O00533 1208 aa16.85■□□□□ 0.29
GFAP-201ENST00000253408 OFD1O75665 1012 aa16.85■□□□□ 0.29
GFAP-201ENST00000253408 PLEKHG5O94827 1062 aa16.85■□□□□ 0.29
GFAP-201ENST00000253408 CLEC17AQ6ZS10 378 aa16.85■□□□□ 0.29
GFAP-201ENST00000253408 GNAI2P04899 355 aa16.85■□□□□ 0.29
GFAP-201ENST00000253408 LRSAM1Q6UWE0 723 aa16.84■□□□□ 0.29
GFAP-201ENST00000253408 LTV1Q96GA3 475 aaPredicted RBP16.84■□□□□ 0.29
GFAP-201ENST00000253408 PKNOX2Q96KN3 472 aa16.84■□□□□ 0.29
GFAP-201ENST00000253408 LRRCC1Q9C099 1032 aa16.84■□□□□ 0.29
GFAP-201ENST00000253408 KNDC1Q76NI1 1749 aa16.84■□□□□ 0.29
GFAP-201ENST00000253408 DIP2CQ9Y2E4 1556 aa16.83■□□□□ 0.29
GFAP-201ENST00000253408 PTPRCP08575 1304 aa16.83■□□□□ 0.28
GFAP-201ENST00000253408 MX1P20591 662 aa16.83■□□□□ 0.28
GFAP-201ENST00000253408 NUTM1Q86Y26 1132 aa16.83■□□□□ 0.28
GFAP-201ENST00000253408 UQCRHLA0A096LP55 91 aa16.83■□□□□ 0.28
GFAP-201ENST00000253408 PNMA6EA0A0J9YXQ4 647 aa16.83■□□□□ 0.28
GFAP-201ENST00000253408 UQCRHP07919 91 aa16.83■□□□□ 0.28
GFAP-201ENST00000253408 NUTM2GQ5VZR2 741 aa16.82■□□□□ 0.28
GFAP-201ENST00000253408 ESYT1Q9BSJ8 1104 aa16.82■□□□□ 0.28
GFAP-201ENST00000253408 ARHGAP31Q2M1Z3 1444 aa16.82■□□□□ 0.28
GFAP-201ENST00000253408 METP08581 1390 aa16.82■□□□□ 0.28
GFAP-201ENST00000253408 ATP7BP35670 1465 aa16.82■□□□□ 0.28
GFAP-201ENST00000253408 CPS1P31327 1500 aa16.81■□□□□ 0.28
GFAP-201ENST00000253408 TMEM131LA2VDJ0 1609 aa16.81■□□□□ 0.28
GFAP-201ENST00000253408 CDK12Q9NYV4 1490 aaPredicted RBP16.81■□□□□ 0.28
GFAP-201ENST00000253408 MTHFSDQ2M296 383 aaKnown RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms