RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 IL1RAPL2Q9NP60 686 aa14.66□□□□□ -0.06
USHBP1-201ENST00000252597 NUTM2GQ5VZR2 741 aa14.65□□□□□ -0.06
USHBP1-201ENST00000252597 ABCC11Q96J66 1382 aa14.65□□□□□ -0.06
USHBP1-201ENST00000252597 NSFL1CQ9UNZ2 370 aaKnown RBP14.65□□□□□ -0.06
USHBP1-201ENST00000252597 FAM177BA6PVY3 158 aa14.64□□□□□ -0.07
USHBP1-201ENST00000252597 RRP9O43818 475 aaKnown RBP14.64□□□□□ -0.07
USHBP1-201ENST00000252597 KLHL40Q2TBA0 621 aa14.64□□□□□ -0.07
USHBP1-201ENST00000252597 TTC22Q5TAA0 569 aa14.64□□□□□ -0.07
USHBP1-201ENST00000252597 PRDM10Q9NQV6 1147 aa14.64□□□□□ -0.07
USHBP1-201ENST00000252597 NEXMIFQ5QGS0 1516 aa14.64□□□□□ -0.07
USHBP1-201ENST00000252597 PIK3C2BO00750 1634 aa14.63□□□□□ -0.07
USHBP1-201ENST00000252597 ZC3H13Q5T200 1668 aaKnown RBP14.63□□□□□ -0.07
USHBP1-201ENST00000252597 RTF1Q92541 710 aaKnown RBP14.63□□□□□ -0.07
USHBP1-201ENST00000252597 TAOK2Q9UL54 1235 aa14.63□□□□□ -0.07
USHBP1-201ENST00000252597 KIF13AQ9H1H9 1805 aa14.63□□□□□ -0.07
USHBP1-201ENST00000252597 PREX1Q8TCU6 1659 aa14.63□□□□□ -0.07
USHBP1-201ENST00000252597 FOXO3O43524 673 aa14.63□□□□□ -0.07
USHBP1-201ENST00000252597 CEBPAP49715 358 aaPredicted RBP14.63□□□□□ -0.07
USHBP1-201ENST00000252597 FKBP5Q13451 457 aaPredicted RBP14.63□□□□□ -0.07
USHBP1-201ENST00000252597 TSC1Q92574 1164 aa14.63□□□□□ -0.07
USHBP1-201ENST00000252597 MYO5BQ9ULV0 1848 aa14.62□□□□□ -0.07
USHBP1-201ENST00000252597 REC8O95072 547 aa14.62□□□□□ -0.07
USHBP1-201ENST00000252597 UQCRHLA0A096LP55 91 aa14.62□□□□□ -0.07
USHBP1-201ENST00000252597 UQCRHP07919 91 aa14.62□□□□□ -0.07
USHBP1-201ENST00000252597 USP26Q9BXU7 913 aa14.62□□□□□ -0.07
USHBP1-201ENST00000252597 ADGRB1O14514 1584 aa14.61□□□□□ -0.07
USHBP1-201ENST00000252597 CLTCQ00610 1675 aaKnown RBP14.61□□□□□ -0.07
USHBP1-201ENST00000252597 TSPYL4Q9UJ04 414 aa14.61□□□□□ -0.07
USHBP1-201ENST00000252597 PTMSP20962 102 aa14.61□□□□□ -0.07
USHBP1-201ENST00000252597 G2E3Q7L622 706 aa14.61□□□□□ -0.07
USHBP1-201ENST00000252597 JARID2Q92833 1246 aaPredicted RBP14.61□□□□□ -0.07
USHBP1-201ENST00000252597 C17orf53Q8N3J3 647 aaPredicted RBP14.6□□□□□ -0.07
USHBP1-201ENST00000252597 RBM33Q96EV2 1170 aaKnown RBP14.6□□□□□ -0.07
USHBP1-201ENST00000252597 LMBRD1Q9NUN5 540 aa14.6□□□□□ -0.07
USHBP1-201ENST00000252597 ERC2O15083 957 aa14.59□□□□□ -0.07
USHBP1-201ENST00000252597 EIF2S2P20042 333 aaKnown RBP14.59□□□□□ -0.07
USHBP1-201ENST00000252597 GPT2Q8TD30 523 aa14.59□□□□□ -0.07
USHBP1-201ENST00000252597 CFAP44Q96MT7 982 aa14.59□□□□□ -0.07
USHBP1-201ENST00000252597 IFT57Q9NWB7 429 aa14.59□□□□□ -0.07
USHBP1-201ENST00000252597 TMEM63CQ9P1W3 806 aa14.59□□□□□ -0.07
USHBP1-201ENST00000252597 IL16Q14005 1332 aa14.59□□□□□ -0.07
USHBP1-201ENST00000252597 SETBP1Q9Y6X0 1596 aa14.59□□□□□ -0.07
USHBP1-201ENST00000252597 MYOM1P52179 1685 aa14.59□□□□□ -0.07
USHBP1-201ENST00000252597 AK9Q5TCS8 1911 aa14.59□□□□□ -0.07
USHBP1-201ENST00000252597 LMOD3Q0VAK6 560 aa14.59□□□□□ -0.07
USHBP1-201ENST00000252597 OS9Q13438 667 aaPredicted RBP14.59□□□□□ -0.07
USHBP1-201ENST00000252597 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.59□□□□□ -0.07
USHBP1-201ENST00000252597 NUTM1Q86Y26 1132 aa14.59□□□□□ -0.07
USHBP1-201ENST00000252597 HMMRO75330 724 aa14.58□□□□□ -0.07
USHBP1-201ENST00000252597 HSP90AB2PQ58FF8 381 aa14.58□□□□□ -0.07
USHBP1-201ENST00000252597 TMX3Q96JJ7 454 aa14.58□□□□□ -0.07
USHBP1-201ENST00000252597 DCTPP1Q9H773 170 aa14.58□□□□□ -0.07
USHBP1-201ENST00000252597 ZMYM3Q14202 1370 aa14.58□□□□□ -0.08
USHBP1-201ENST00000252597 FIBPO43427 364 aa14.58□□□□□ -0.08
USHBP1-201ENST00000252597 CEP85Q6P2H3 762 aa14.58□□□□□ -0.08
USHBP1-201ENST00000252597 PPP6R1Q9UPN7 881 aa14.58□□□□□ -0.08
USHBP1-201ENST00000252597 IQSEC2Q5JU85 1478 aa14.58□□□□□ -0.08
USHBP1-201ENST00000252597 MCCP23508 829 aa14.58□□□□□ -0.08
USHBP1-201ENST00000252597 STK31Q9BXU1 1019 aa14.58□□□□□ -0.08
USHBP1-201ENST00000252597 ISY1Q9ULR0 285 aaKnown RBP14.58□□□□□ -0.08
USHBP1-201ENST00000252597 TMEM131LA2VDJ0 1609 aa14.57□□□□□ -0.08
USHBP1-201ENST00000252597 QRICH2Q9H0J4 1663 aa14.57□□□□□ -0.08
USHBP1-201ENST00000252597 SBNO2Q9Y2G9 1366 aa14.57□□□□□ -0.08
USHBP1-201ENST00000252597 DDIT3P35638 169 aa14.57□□□□□ -0.08
USHBP1-201ENST00000252597 PALD1Q9ULE6 856 aa14.57□□□□□ -0.08
USHBP1-201ENST00000252597 TPM2P07951 284 aa14.56□□□□□ -0.08
USHBP1-201ENST00000252597 USP25Q9UHP3 1055 aa14.56□□□□□ -0.08
USHBP1-201ENST00000252597 AGLP35573 1532 aa14.56□□□□□ -0.08
USHBP1-201ENST00000252597 CPA1P15085 419 aa14.55□□□□□ -0.08
USHBP1-201ENST00000252597 SPC24Q8NBT2 197 aa14.55□□□□□ -0.08
USHBP1-201ENST00000252597 NSD2O96028 1365 aa14.55□□□□□ -0.08
USHBP1-201ENST00000252597 GADD45BO75293 160 aaPredicted RBP14.55□□□□□ -0.08
USHBP1-201ENST00000252597 KCNJ4P48050 445 aa14.55□□□□□ -0.08
USHBP1-201ENST00000252597 ANKRD44Q8N8A2 993 aa14.55□□□□□ -0.08
USHBP1-201ENST00000252597 NUDT16Q96DE0 195 aaKnown RBP14.55□□□□□ -0.08
USHBP1-201ENST00000252597 MSH6P52701 1360 aa14.54□□□□□ -0.08
USHBP1-201ENST00000252597 ARHGEF40Q8TER5 1519 aa14.54□□□□□ -0.08
USHBP1-201ENST00000252597 IL13P35225 146 aa14.54□□□□□ -0.08
USHBP1-201ENST00000252597 TTC12Q9H892 705 aaPredicted RBP14.54□□□□□ -0.08
USHBP1-201ENST00000252597 RIMS2Q9UQ26 1411 aa14.53□□□□□ -0.08
USHBP1-201ENST00000252597 AMPHP49418 695 aa14.53□□□□□ -0.08
USHBP1-201ENST00000252597 PDE1AP54750 535 aa14.53□□□□□ -0.08
USHBP1-201ENST00000252597 CCDC9Q9Y3X0 531 aaKnown RBP14.53□□□□□ -0.08
USHBP1-201ENST00000252597 YTHDC2Q9H6S0 1430 aaKnown RBP14.53□□□□□ -0.08
USHBP1-201ENST00000252597 MYO3AQ8NEV4 1616 aa14.53□□□□□ -0.08
USHBP1-201ENST00000252597 VPS37CA5D8V6 355 aaPredicted RBP14.53□□□□□ -0.08
USHBP1-201ENST00000252597 OFD1O75665 1012 aa14.53□□□□□ -0.08
USHBP1-201ENST00000252597 SURF6O75683 361 aaKnown RBP14.53□□□□□ -0.08
USHBP1-201ENST00000252597 RPAP2Q8IXW5 612 aaPredicted RBP14.53□□□□□ -0.08
USHBP1-201ENST00000252597 TSPY26PQ9H489 355 aa14.53□□□□□ -0.08
USHBP1-201ENST00000252597 ZDHHC9Q9Y397 364 aa14.53□□□□□ -0.08
USHBP1-201ENST00000252597 ARHGAP45Q92619 1136 aa14.52□□□□□ -0.08
USHBP1-201ENST00000252597 ZFYVE9O95405 1425 aa14.52□□□□□ -0.09
USHBP1-201ENST00000252597 ABCC4O15439 1325 aa14.52□□□□□ -0.09
USHBP1-201ENST00000252597 A2ML1A8K2U0 1454 aa14.52□□□□□ -0.09
USHBP1-201ENST00000252597 ANXA1P04083 346 aa14.52□□□□□ -0.09
USHBP1-201ENST00000252597 KIAA2012Q0VF49 1180 aa14.52□□□□□ -0.09
USHBP1-201ENST00000252597 REREQ9P2R6 1566 aa14.52□□□□□ -0.09
USHBP1-201ENST00000252597 CWC22Q9HCG8 908 aaKnown RBP14.51□□□□□ -0.09
USHBP1-201ENST00000252597 SPG7Q9UQ90 795 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms