RNA–Protein interactions for RNA: ENST00000251654.8

PCCB-201, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCCB, Length 1,833 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-201ENST00000251654 ANKRD24Q8TF21 1146 aa22.26■■□□□ 1.15
PCCB-201ENST00000251654 ZNF428Q96B54 188 aa22.25■■□□□ 1.15
PCCB-201ENST00000251654 SMC4Q9NTJ3 1288 aa22.25■■□□□ 1.15
PCCB-201ENST00000251654 LTBP4Q8N2S1 1624 aa22.25■■□□□ 1.15
PCCB-201ENST00000251654 ABCA3Q99758 1704 aa22.25■■□□□ 1.15
PCCB-201ENST00000251654 CHL1O00533 1208 aa22.24■■□□□ 1.15
PCCB-201ENST00000251654 HTATSF1O43719 755 aaKnown RBP22.24■■□□□ 1.15
PCCB-201ENST00000251654 TSPYL6Q8N831 410 aa22.24■■□□□ 1.15
PCCB-201ENST00000251654 PANK1Q8TE04 598 aa22.24■■□□□ 1.15
PCCB-201ENST00000251654 CPDO75976 1380 aa22.23■■□□□ 1.15
PCCB-201ENST00000251654 MAP3K5Q99683 1374 aa22.23■■□□□ 1.15
PCCB-201ENST00000251654 ALDH1L2Q3SY69 923 aa22.23■■□□□ 1.15
PCCB-201ENST00000251654 FAM208AQ9UK61 1670 aaKnown RBP22.22■■□□□ 1.15
PCCB-201ENST00000251654 VAMP4O75379 141 aa22.22■■□□□ 1.15
PCCB-201ENST00000251654 RTF1Q92541 710 aaKnown RBP22.22■■□□□ 1.15
PCCB-201ENST00000251654 TNNQ9UQP3 1299 aa22.22■■□□□ 1.15
PCCB-201ENST00000251654 GNAT3A8MTJ3 354 aa22.22■■□□□ 1.15
PCCB-201ENST00000251654 RLBP1P12271 317 aa22.22■■□□□ 1.15
PCCB-201ENST00000251654 C8orf58Q8NAV2 365 aa22.21■■□□□ 1.15
PCCB-201ENST00000251654 KIAA0232Q92628 1395 aa22.2■■□□□ 1.14
PCCB-201ENST00000251654 BRPF1P55201 1214 aaPredicted RBP22.2■■□□□ 1.14
PCCB-201ENST00000251654 ZKSCAN2Q63HK3 967 aa22.2■■□□□ 1.14
PCCB-201ENST00000251654 TWISTNBQ3B726 338 aaPredicted RBP22.19■■□□□ 1.14
PCCB-201ENST00000251654 COG6Q9Y2V7 657 aa22.19■■□□□ 1.14
PCCB-201ENST00000251654 KIF16BQ96L93 1317 aa22.18■■□□□ 1.14
PCCB-201ENST00000251654 ROBO1Q9Y6N7 1651 aa22.17■■□□□ 1.14
PCCB-201ENST00000251654 ELL2O00472 640 aaPredicted RBP22.17■■□□□ 1.14
PCCB-201ENST00000251654 TRIM27P14373 513 aa22.17■■□□□ 1.14
PCCB-201ENST00000251654 IL17REQ8NFR9 667 aa22.17■■□□□ 1.14
PCCB-201ENST00000251654 CEMIPQ8WUJ3 1361 aa22.16■■□□□ 1.14
PCCB-201ENST00000251654 ATF7IPQ6VMQ6 1270 aa22.16■■□□□ 1.14
PCCB-201ENST00000251654 CLUAP1Q96AJ1 413 aa22.16■■□□□ 1.14
PCCB-201ENST00000251654 VIRMAQ69YN4 1812 aaKnown RBP22.16■■□□□ 1.14
PCCB-201ENST00000251654 CHRNA2Q15822 529 aa22.15■■□□□ 1.14
PCCB-201ENST00000251654 TSHZ2Q9NRE2 1034 aa22.15■■□□□ 1.14
PCCB-201ENST00000251654 NOB1Q9ULX3 412 aaKnown RBP22.15■■□□□ 1.14
PCCB-201ENST00000251654 KRT24Q2M2I5 525 aa22.14■■□□□ 1.13
PCCB-201ENST00000251654 DZIP1LQ8IYY4 767 aaKnown RBP22.14■■□□□ 1.13
PCCB-201ENST00000251654 KDM2BQ8NHM5 1336 aa22.14■■□□□ 1.13
PCCB-201ENST00000251654 MIS18AQ9NYP9 233 aa22.13■■□□□ 1.13
PCCB-201ENST00000251654 MS4A1P11836 297 aa22.13■■□□□ 1.13
PCCB-201ENST00000251654 AMOTQ4VCS5 1084 aa22.13■■□□□ 1.13
PCCB-201ENST00000251654 MRPL50Q8N5N7 158 aaKnown RBP22.13■■□□□ 1.13
PCCB-201ENST00000251654 TSPYL4Q9UJ04 414 aa22.13■■□□□ 1.13
PCCB-201ENST00000251654 AHDC1Q5TGY3 1603 aaPredicted RBP22.12■■□□□ 1.13
PCCB-201ENST00000251654 PLEKHO1Q53GL0 409 aaPredicted RBP22.12■■□□□ 1.13
PCCB-201ENST00000251654 FTSJ3Q8IY81 847 aaKnown RBP22.12■■□□□ 1.13
PCCB-201ENST00000251654 ADAMTS7Q9UKP4 1686 aa22.11■■□□□ 1.13
PCCB-201ENST00000251654 MVPQ14764 893 aaKnown RBP22.11■■□□□ 1.13
PCCB-201ENST00000251654 IPO8O15397 1037 aaKnown RBP22.1■■□□□ 1.13
PCCB-201ENST00000251654 AAMPQ13685 434 aa22.1■■□□□ 1.13
PCCB-201ENST00000251654 AKAP4Q5JQC9 854 aa22.1■■□□□ 1.13
PCCB-201ENST00000251654 ZNF530Q6P9A1 599 aaPredicted RBP22.1■■□□□ 1.13
PCCB-201ENST00000251654 NLRP2Q9NX02 1062 aa22.1■■□□□ 1.13
PCCB-201ENST00000251654 MEGF6O75095 1541 aa22.1■■□□□ 1.13
PCCB-201ENST00000251654 OVOS2A0A0G2JMS6 1433 aa22.09■■□□□ 1.13
PCCB-201ENST00000251654 HAP1P54257 671 aaPredicted RBP22.09■■□□□ 1.13
PCCB-201ENST00000251654 KDM3BQ7LBC6 1761 aa22.09■■□□□ 1.13
PCCB-201ENST00000251654 BABAM1Q9NWV8 329 aa22.09■■□□□ 1.13
PCCB-201ENST00000251654 PLEKHG2Q9H7P9 1386 aa22.08■■□□□ 1.13
PCCB-201ENST00000251654 ARHGAP45Q92619 1136 aa22.08■■□□□ 1.13
PCCB-201ENST00000251654 PRDM11Q9NQV5 511 aa22.08■■□□□ 1.13
PCCB-201ENST00000251654 TAF7Q15545 349 aaPredicted RBP22.08■■□□□ 1.12
PCCB-201ENST00000251654 COL5A2P05997 1499 aaPredicted RBP22.07■■□□□ 1.12
PCCB-201ENST00000251654 PKD1L3Q7Z443 1732 aa22.07■■□□□ 1.12
PCCB-201ENST00000251654 TCERG1O14776 1098 aaKnown RBP22.07■■□□□ 1.12
PCCB-201ENST00000251654 CENPQQ7L2Z9 268 aaPredicted RBP22.07■■□□□ 1.12
PCCB-201ENST00000251654 LGR6Q9HBX8 967 aa22.06■■□□□ 1.12
PCCB-201ENST00000251654 SIPA1L3O60292 1781 aaPredicted RBP22.06■■□□□ 1.12
PCCB-201ENST00000251654 CSB-PGBD3P0DP91 1061 aa22.06■■□□□ 1.12
PCCB-201ENST00000251654 RAPGEF4Q8WZA2 1011 aa22.06■■□□□ 1.12
PCCB-201ENST00000251654 TMEM57Q8N5G2 664 aa22.05■■□□□ 1.12
PCCB-201ENST00000251654 COL22A1Q8NFW1 1626 aaPredicted RBP22.05■■□□□ 1.12
PCCB-201ENST00000251654 C1orf141Q5JVX7 400 aa22.04■■□□□ 1.12
PCCB-201ENST00000251654 WDR17Q8IZU2 1322 aa22.04■■□□□ 1.12
PCCB-201ENST00000251654 MPRIPQ6WCQ1 1025 aa22.03■■□□□ 1.12
PCCB-201ENST00000251654 DDX19BQ9UMR2 479 aa22.03■■□□□ 1.12
PCCB-201ENST00000251654 ITPRIPQ8IWB1 547 aa22.03■■□□□ 1.12
PCCB-201ENST00000251654 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.03■■□□□ 1.12
PCCB-201ENST00000251654 SCN11AQ9UI33 1791 aa22.03■■□□□ 1.12
PCCB-201ENST00000251654 ABCC4O15439 1325 aa22.02■■□□□ 1.12
PCCB-201ENST00000251654 RNMTO43148 476 aaKnown RBP22.01■■□□□ 1.11
PCCB-201ENST00000251654 PCDHB15Q9Y5E8 787 aa22.01■■□□□ 1.11
PCCB-201ENST00000251654 PARP4Q9UKK3 1724 aaKnown RBP22.01■■□□□ 1.11
PCCB-201ENST00000251654 RGS12O14924 1447 aa22.01■■□□□ 1.11
PCCB-201ENST00000251654 TATP17735 454 aaPredicted RBP22.01■■□□□ 1.11
PCCB-201ENST00000251654 SOS1Q07889 1333 aaPredicted RBP22■■□□□ 1.11
PCCB-201ENST00000251654 IGHDP01880 384 aa22■■□□□ 1.11
PCCB-201ENST00000251654 CACNA1FO60840 1977 aa22■■□□□ 1.11
PCCB-201ENST00000251654 COL16A1Q07092 1604 aaPredicted RBP21.99■■□□□ 1.11
PCCB-201ENST00000251654 TEFQ10587 303 aa21.99■■□□□ 1.11
PCCB-201ENST00000251654 KDM6AO15550 1401 aaPredicted RBP21.98■■□□□ 1.11
PCCB-201ENST00000251654 API5Q9BZZ5 524 aaKnown RBP21.98■■□□□ 1.11
PCCB-201ENST00000251654 SPG7Q9UQ90 795 aa21.98■■□□□ 1.11
PCCB-201ENST00000251654 PHLPP1O60346 1717 aa21.97■■□□□ 1.11
PCCB-201ENST00000251654 ZBTB40Q9NUA8 1239 aa21.97■■□□□ 1.11
PCCB-201ENST00000251654 PHKG2P15735 406 aa21.96■■□□□ 1.11
PCCB-201ENST00000251654 PTPRCP08575 1304 aa21.96■■□□□ 1.11
PCCB-201ENST00000251654 COL14A1Q05707 1796 aaKnown RBP21.96■■□□□ 1.11
PCCB-201ENST00000251654 SLC4A2P04920 1241 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms