RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 KIF24Q5T7B8 1368 aa24.52■■□□□ 1.52
CDC42EP1-201ENST00000249014 MTHFSDQ2M296 383 aaKnown RBP24.51■■□□□ 1.51
CDC42EP1-201ENST00000249014 BMP2KLQ5H9B9 411 aa24.51■■□□□ 1.51
CDC42EP1-201ENST00000249014 CEP170BQ9Y4F5 1589 aaPredicted RBP24.51■■□□□ 1.51
CDC42EP1-201ENST00000249014 KDRP35968 1356 aa24.5■■□□□ 1.51
CDC42EP1-201ENST00000249014 INTS3Q68E01 1043 aaKnown RBP24.5■■□□□ 1.51
CDC42EP1-201ENST00000249014 MARF1Q9Y4F3 1742 aaKnown RBP24.49■■□□□ 1.51
CDC42EP1-201ENST00000249014 KCNA6P17658 529 aa24.49■■□□□ 1.51
CDC42EP1-201ENST00000249014 EYA1Q99502 592 aa24.49■■□□□ 1.51
CDC42EP1-201ENST00000249014 MIS18AQ9NYP9 233 aa24.49■■□□□ 1.51
CDC42EP1-201ENST00000249014 HAP1P54257 671 aaPredicted RBP24.48■■□□□ 1.51
CDC42EP1-201ENST00000249014 IGSF1Q8N6C5 1336 aa24.48■■□□□ 1.51
CDC42EP1-201ENST00000249014 AMPHP49418 695 aa24.47■■□□□ 1.51
CDC42EP1-201ENST00000249014 ANKARQ7Z5J8 1434 aa24.46■■□□□ 1.51
CDC42EP1-201ENST00000249014 NLRP6P59044 892 aa24.46■■□□□ 1.51
CDC42EP1-201ENST00000249014 ATP10DQ9P241 1426 aa24.44■■□□□ 1.5
CDC42EP1-201ENST00000249014 RBM25P49756 843 aaKnown RBP24.44■■□□□ 1.5
CDC42EP1-201ENST00000249014 MSH6P52701 1360 aa24.43■■□□□ 1.5
CDC42EP1-201ENST00000249014 NUTM2GQ5VZR2 741 aa24.43■■□□□ 1.5
CDC42EP1-201ENST00000249014 SPRYD3Q8NCJ5 442 aa24.43■■□□□ 1.5
CDC42EP1-201ENST00000249014 RTF1Q92541 710 aaKnown RBP24.43■■□□□ 1.5
CDC42EP1-201ENST00000249014 PTPRCP08575 1304 aa24.43■■□□□ 1.5
CDC42EP1-201ENST00000249014 DCTPP1Q9H773 170 aa24.43■■□□□ 1.5
CDC42EP1-201ENST00000249014 SLC4A2P04920 1241 aa24.42■■□□□ 1.5
CDC42EP1-201ENST00000249014 TSPYL4Q9UJ04 414 aa24.42■■□□□ 1.5
CDC42EP1-201ENST00000249014 USP54Q70EL1 1684 aa24.41■■□□□ 1.5
CDC42EP1-201ENST00000249014 ANKRD44Q8N8A2 993 aa24.4■■□□□ 1.5
CDC42EP1-201ENST00000249014 HOXC9P31274 260 aa24.4■■□□□ 1.5
CDC42EP1-201ENST00000249014 NWD1Q149M9 1564 aa24.4■■□□□ 1.5
CDC42EP1-201ENST00000249014 TBC1D9Q6ZT07 1266 aa24.39■■□□□ 1.5
CDC42EP1-201ENST00000249014 GAS2L2Q8NHY3 880 aa24.39■■□□□ 1.5
CDC42EP1-201ENST00000249014 RTL1A6NKG5 1358 aa24.39■■□□□ 1.5
CDC42EP1-201ENST00000249014 LRRC37A3O60309 1634 aa24.39■■□□□ 1.49
CDC42EP1-201ENST00000249014 CEP85Q6P2H3 762 aa24.39■■□□□ 1.49
CDC42EP1-201ENST00000249014 G2E3Q7L622 706 aa24.38■■□□□ 1.49
CDC42EP1-201ENST00000249014 MEIS3Q99687 375 aa24.38■■□□□ 1.49
CDC42EP1-201ENST00000249014 PLEKHM2Q8IWE5 1019 aa24.37■■□□□ 1.49
CDC42EP1-201ENST00000249014 GSPT1P15170 499 aaKnown RBP24.37■■□□□ 1.49
CDC42EP1-201ENST00000249014 ABTB2Q8N961 1025 aa24.37■■□□□ 1.49
CDC42EP1-201ENST00000249014 RPAP2Q8IXW5 612 aaPredicted RBP24.36■■□□□ 1.49
CDC42EP1-201ENST00000249014 CHD2O14647 1828 aaKnown RBP24.35■■□□□ 1.49
CDC42EP1-201ENST00000249014 HSCBQ8IWL3 235 aa24.35■■□□□ 1.49
CDC42EP1-201ENST00000249014 C16orf71Q8IYS4 520 aaPredicted RBP24.35■■□□□ 1.49
CDC42EP1-201ENST00000249014 KIF2CQ99661 725 aa24.35■■□□□ 1.49
CDC42EP1-201ENST00000249014 F6X3S4 739 aa24.33■■□□□ 1.49
CDC42EP1-201ENST00000249014 HTATSF1O43719 755 aaKnown RBP24.33■■□□□ 1.48
CDC42EP1-201ENST00000249014 GNAT3A8MTJ3 354 aa24.32■■□□□ 1.48
CDC42EP1-201ENST00000249014 LTN1O94822 1766 aa24.32■■□□□ 1.48
CDC42EP1-201ENST00000249014 SNX21Q969T3 373 aa24.32■■□□□ 1.48
CDC42EP1-201ENST00000249014 LTV1Q96GA3 475 aaPredicted RBP24.32■■□□□ 1.48
CDC42EP1-201ENST00000249014 FAM208AQ9UK61 1670 aaKnown RBP24.31■■□□□ 1.48
CDC42EP1-201ENST00000249014 RBM33Q96EV2 1170 aaKnown RBP24.31■■□□□ 1.48
CDC42EP1-201ENST00000249014 NCOA3Q9Y6Q9 1424 aa24.31■■□□□ 1.48
CDC42EP1-201ENST00000249014 CDC45O75419 566 aa24.3■■□□□ 1.48
CDC42EP1-201ENST00000249014 SLC4A10Q6U841 1118 aa24.3■■□□□ 1.48
CDC42EP1-201ENST00000249014 OTUD7AQ8TE49 926 aaPredicted RBP24.3■■□□□ 1.48
CDC42EP1-201ENST00000249014 TTC22Q5TAA0 569 aa24.3■■□□□ 1.48
CDC42EP1-201ENST00000249014 CHMP5Q9NZZ3 219 aa24.3■■□□□ 1.48
CDC42EP1-201ENST00000249014 IL17REQ8NFR9 667 aa24.29■■□□□ 1.48
CDC42EP1-201ENST00000249014 PHF8Q9UPP1 1060 aa24.29■■□□□ 1.48
CDC42EP1-201ENST00000249014 C14orf37Q86TY3 774 aa24.29■■□□□ 1.48
CDC42EP1-201ENST00000249014 MAP3K5Q99683 1374 aa24.28■■□□□ 1.48
CDC42EP1-201ENST00000249014 SMARCA5O60264 1052 aaPredicted RBP24.28■■□□□ 1.48
CDC42EP1-201ENST00000249014 TRHP20396 242 aaPredicted RBP24.27■■□□□ 1.48
CDC42EP1-201ENST00000249014 APBB1O00213 710 aa24.27■■□□□ 1.48
CDC42EP1-201ENST00000249014 CCT4P50991 539 aaKnown RBP24.27■■□□□ 1.48
CDC42EP1-201ENST00000249014 USHBP1Q8N6Y0 703 aa24.27■■□□□ 1.48
CDC42EP1-201ENST00000249014 IL27Q8NEV9 243 aa24.27■■□□□ 1.48
CDC42EP1-201ENST00000249014 STK31Q9BXU1 1019 aa24.26■■□□□ 1.47
CDC42EP1-201ENST00000249014 DDIT3P35638 169 aa24.26■■□□□ 1.47
CDC42EP1-201ENST00000249014 ANKLE2Q86XL3 938 aa24.26■■□□□ 1.47
CDC42EP1-201ENST00000249014 CD2BP2O95400 341 aaKnown RBP24.25■■□□□ 1.47
CDC42EP1-201ENST00000249014 SETD1BQ9UPS6 1966 aaKnown RBP24.25■■□□□ 1.47
CDC42EP1-201ENST00000249014 NECTIN2Q92692 538 aa24.25■■□□□ 1.47
CDC42EP1-201ENST00000249014 CACNA1FO60840 1977 aa24.24■■□□□ 1.47
CDC42EP1-201ENST00000249014 FLIIQ13045 1269 aa24.24■■□□□ 1.47
CDC42EP1-201ENST00000249014 ZNF142P52746 1687 aaPredicted RBP24.24■■□□□ 1.47
CDC42EP1-201ENST00000249014 NFAT5O94916 1531 aa24.24■■□□□ 1.47
CDC42EP1-201ENST00000249014 CCDC30Q5VVM6 783 aa24.23■■□□□ 1.47
CDC42EP1-201ENST00000249014 RBM42Q9BTD8 480 aaKnown RBP24.23■■□□□ 1.47
CDC42EP1-201ENST00000249014 MCM4P33991 863 aa24.23■■□□□ 1.47
CDC42EP1-201ENST00000249014 TAF7Q15545 349 aaPredicted RBP24.22■■□□□ 1.47
CDC42EP1-201ENST00000249014 BRPF3Q9ULD4 1205 aa24.22■■□□□ 1.47
CDC42EP1-201ENST00000249014 HMMRO75330 724 aa24.21■■□□□ 1.47
CDC42EP1-201ENST00000249014 FKBP5Q13451 457 aaPredicted RBP24.21■■□□□ 1.47
CDC42EP1-201ENST00000249014 IP6K1Q92551 441 aa24.21■■□□□ 1.47
CDC42EP1-201ENST00000249014 SDSP20132 328 aa24.2■■□□□ 1.47
CDC42EP1-201ENST00000249014 RGPD2P0DJD1 1756 aa24.2■■□□□ 1.46
CDC42EP1-201ENST00000249014 GNAI2P04899 355 aa24.19■■□□□ 1.46
CDC42EP1-201ENST00000249014 HSP90AB1P08238 724 aaKnown RBP24.19■■□□□ 1.46
CDC42EP1-201ENST00000249014 N4BP2Q86UW6 1770 aaPredicted RBP24.19■■□□□ 1.46
CDC42EP1-201ENST00000249014 ADGRL3Q9HAR2 1447 aa24.19■■□□□ 1.46
CDC42EP1-201ENST00000249014 ESCO1Q5FWF5 840 aa24.19■■□□□ 1.46
CDC42EP1-201ENST00000249014 NBPF6Q5VWK0 638 aa24.19■■□□□ 1.46
CDC42EP1-201ENST00000249014 NBPF4Q96M43 638 aa24.19■■□□□ 1.46
CDC42EP1-201ENST00000249014 BABAM1Q9NWV8 329 aa24.19■■□□□ 1.46
CDC42EP1-201ENST00000249014 SOS1Q07889 1333 aaPredicted RBP24.17■■□□□ 1.46
CDC42EP1-201ENST00000249014 PSME1Q06323 249 aa24.17■■□□□ 1.46
CDC42EP1-201ENST00000249014 CEMIPQ8WUJ3 1361 aa24.16■■□□□ 1.46
CDC42EP1-201ENST00000249014 K7ELQ4 463 aaPredicted RBP24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms