RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 ADGRB2O60241 1585 aa15.52■□□□□ 0.08
RAB3IP-201ENST00000247833 USP32Q8NFA0 1604 aa15.52■□□□□ 0.07
RAB3IP-201ENST00000247833 TTC22Q5TAA0 569 aa15.52■□□□□ 0.07
RAB3IP-201ENST00000247833 RPAP2Q8IXW5 612 aaPredicted RBP15.52■□□□□ 0.07
RAB3IP-201ENST00000247833 DCTPP1Q9H773 170 aa15.52■□□□□ 0.07
RAB3IP-201ENST00000247833 SDSP20132 328 aa15.52■□□□□ 0.07
RAB3IP-201ENST00000247833 SNX21Q969T3 373 aa15.52■□□□□ 0.07
RAB3IP-201ENST00000247833 CEP85Q6P2H3 762 aa15.51■□□□□ 0.07
RAB3IP-201ENST00000247833 ANKRD44Q8N8A2 993 aa15.51■□□□□ 0.07
RAB3IP-201ENST00000247833 RBM33Q96EV2 1170 aaKnown RBP15.51■□□□□ 0.07
RAB3IP-201ENST00000247833 MSH6P52701 1360 aa15.51■□□□□ 0.07
RAB3IP-201ENST00000247833 RABEP1Q15276 862 aa15.5■□□□□ 0.07
RAB3IP-201ENST00000247833 MTHFSDQ2M296 383 aaKnown RBP15.5■□□□□ 0.07
RAB3IP-201ENST00000247833 ANO2Q9NQ90 1003 aa15.5■□□□□ 0.07
RAB3IP-201ENST00000247833 A2ML1A8K2U0 1454 aa15.5■□□□□ 0.07
RAB3IP-201ENST00000247833 USHBP1Q8N6Y0 703 aa15.5■□□□□ 0.07
RAB3IP-201ENST00000247833 REC8O95072 547 aa15.5■□□□□ 0.07
RAB3IP-201ENST00000247833 RRAGDQ9NQL2 400 aaPredicted RBP15.49■□□□□ 0.07
RAB3IP-201ENST00000247833 CIZ1Q9ULV3 898 aaPredicted RBP15.49■□□□□ 0.07
RAB3IP-201ENST00000247833 AMOTL2Q9Y2J4 779 aa15.49■□□□□ 0.07
RAB3IP-201ENST00000247833 PPP6R1Q9UPN7 881 aa15.49■□□□□ 0.07
RAB3IP-201ENST00000247833 ATP7BP35670 1465 aa15.49■□□□□ 0.07
RAB3IP-201ENST00000247833 MED14O60244 1454 aa15.49■□□□□ 0.07
RAB3IP-201ENST00000247833 NEK4P51957 841 aa15.48■□□□□ 0.07
RAB3IP-201ENST00000247833 OS9Q13438 667 aaPredicted RBP15.48■□□□□ 0.07
RAB3IP-201ENST00000247833 MAP3K19Q56UN5 1328 aa15.48■□□□□ 0.07
RAB3IP-201ENST00000247833 TMEM131LA2VDJ0 1609 aa15.48■□□□□ 0.07
RAB3IP-201ENST00000247833 CHL1O00533 1208 aa15.48■□□□□ 0.07
RAB3IP-201ENST00000247833 BRPF1P55201 1214 aaPredicted RBP15.48■□□□□ 0.07
RAB3IP-201ENST00000247833 TNRQ92752 1358 aa15.48■□□□□ 0.07
RAB3IP-201ENST00000247833 GNAI2P04899 355 aa15.48■□□□□ 0.07
RAB3IP-201ENST00000247833 SKOR2Q2VWA4 1001 aaPredicted RBP15.48■□□□□ 0.07
RAB3IP-201ENST00000247833 CAVIN1Q6NZI2 390 aaKnown RBP15.48■□□□□ 0.07
RAB3IP-201ENST00000247833 IL1RAPL2Q9NP60 686 aa15.48■□□□□ 0.07
RAB3IP-201ENST00000247833 LTKP29376 864 aa15.47■□□□□ 0.07
RAB3IP-201ENST00000247833 ABTB2Q8N961 1025 aa15.47■□□□□ 0.07
RAB3IP-201ENST00000247833 PREX1Q8TCU6 1659 aa15.47■□□□□ 0.07
RAB3IP-201ENST00000247833 MAP4K4O95819 1239 aaPredicted RBP15.47■□□□□ 0.07
RAB3IP-201ENST00000247833 RAB3GAP1Q15042 981 aa15.47■□□□□ 0.07
RAB3IP-201ENST00000247833 ROBO2Q9HCK4 1378 aa15.46■□□□□ 0.07
RAB3IP-201ENST00000247833 KIF2CQ99661 725 aa15.46■□□□□ 0.07
RAB3IP-201ENST00000247833 MCCP23508 829 aa15.46■□□□□ 0.06
RAB3IP-201ENST00000247833 PTCH1Q13635 1447 aa15.46■□□□□ 0.06
RAB3IP-201ENST00000247833 ERC2O15083 957 aa15.45■□□□□ 0.06
RAB3IP-201ENST00000247833 PRPF40AO75400 957 aaKnown RBP15.45■□□□□ 0.06
RAB3IP-201ENST00000247833 CCT4P50991 539 aaKnown RBP15.45■□□□□ 0.06
RAB3IP-201ENST00000247833 EYA1Q99502 592 aa15.45■□□□□ 0.06
RAB3IP-201ENST00000247833 CPS1P31327 1500 aa15.45■□□□□ 0.06
RAB3IP-201ENST00000247833 MAP2P11137 1827 aaKnown RBP15.44■□□□□ 0.06
RAB3IP-201ENST00000247833 PTPRCP08575 1304 aa15.44■□□□□ 0.06
RAB3IP-201ENST00000247833 FLIIQ13045 1269 aa15.44■□□□□ 0.06
RAB3IP-201ENST00000247833 CCDC30Q5VVM6 783 aa15.44■□□□□ 0.06
RAB3IP-201ENST00000247833 ZGPATQ8N5A5 531 aaKnown RBP15.44■□□□□ 0.06
RAB3IP-201ENST00000247833 BAG4O95429 457 aaKnown RBP15.44■□□□□ 0.06
RAB3IP-201ENST00000247833 NUCB2P80303 420 aa15.44■□□□□ 0.06
RAB3IP-201ENST00000247833 USP26Q9BXU7 913 aa15.44■□□□□ 0.06
RAB3IP-201ENST00000247833 AATKQ6ZMQ8 1374 aa15.44■□□□□ 0.06
RAB3IP-201ENST00000247833 CDK12Q9NYV4 1490 aaPredicted RBP15.44■□□□□ 0.06
RAB3IP-201ENST00000247833 LRRCC1Q9C099 1032 aa15.44■□□□□ 0.06
RAB3IP-201ENST00000247833 PTMSP20962 102 aa15.43■□□□□ 0.06
RAB3IP-201ENST00000247833 HDGFL1Q5TGJ6 251 aa15.43■□□□□ 0.06
RAB3IP-201ENST00000247833 UBTFL1P0CB47 393 aaPredicted RBP15.43■□□□□ 0.06
RAB3IP-201ENST00000247833 UPF3BQ9BZI7 483 aaKnown RBP15.43■□□□□ 0.06
RAB3IP-201ENST00000247833 LRRFIP2Q9Y608 721 aaKnown RBP15.43■□□□□ 0.06
RAB3IP-201ENST00000247833 CPSF1Q10570 1443 aaKnown RBP15.43■□□□□ 0.06
RAB3IP-201ENST00000247833 PKP1Q13835 747 aa15.42■□□□□ 0.06
RAB3IP-201ENST00000247833 CHAMP1Q96JM3 812 aa15.42■□□□□ 0.06
RAB3IP-201ENST00000247833 SURF6O75683 361 aaKnown RBP15.42■□□□□ 0.06
RAB3IP-201ENST00000247833 PDE1AP54750 535 aa15.42■□□□□ 0.06
RAB3IP-201ENST00000247833 RTL1A6NKG5 1358 aa15.42■□□□□ 0.06
RAB3IP-201ENST00000247833 PIK3R4Q99570 1358 aa15.42■□□□□ 0.06
RAB3IP-201ENST00000247833 GNAI3P08754 354 aa15.42■□□□□ 0.06
RAB3IP-201ENST00000247833 NASPP49321 788 aaPredicted RBP15.42■□□□□ 0.06
RAB3IP-201ENST00000247833 GAS2L3Q86XJ1 694 aa15.42■□□□□ 0.06
RAB3IP-201ENST00000247833 NUTM1Q86Y26 1132 aa15.42■□□□□ 0.06
RAB3IP-201ENST00000247833 GNAT3A8MTJ3 354 aa15.41■□□□□ 0.06
RAB3IP-201ENST00000247833 ANXA1P04083 346 aa15.41■□□□□ 0.06
RAB3IP-201ENST00000247833 VIRMAQ69YN4 1812 aaKnown RBP15.41■□□□□ 0.06
RAB3IP-201ENST00000247833 FSD2A1L4K1 749 aa15.4■□□□□ 0.06
RAB3IP-201ENST00000247833 MX1P20591 662 aa15.4■□□□□ 0.06
RAB3IP-201ENST00000247833 TMEM2Q9UHN6 1383 aa15.4■□□□□ 0.06
RAB3IP-201ENST00000247833 RICTORQ6R327 1708 aa15.39■□□□□ 0.05
RAB3IP-201ENST00000247833 CLTCQ00610 1675 aaKnown RBP15.39■□□□□ 0.05
RAB3IP-201ENST00000247833 PNMA6EA0A0J9YXQ4 647 aa15.39■□□□□ 0.05
RAB3IP-201ENST00000247833 TEFQ10587 303 aa15.39■□□□□ 0.05
RAB3IP-201ENST00000247833 XPCQ01831 940 aaPredicted RBP15.38■□□□□ 0.05
RAB3IP-201ENST00000247833 RBM27Q9P2N5 1060 aaKnown RBP15.38■□□□□ 0.05
RAB3IP-201ENST00000247833 ESPNB1AK53 854 aa15.38■□□□□ 0.05
RAB3IP-201ENST00000247833 RNF214Q8ND24 703 aa15.38■□□□□ 0.05
RAB3IP-201ENST00000247833 LARP6Q9BRS8 491 aaKnown RBP15.38■□□□□ 0.05
RAB3IP-201ENST00000247833 PLEKHG3A1L390 1219 aa15.37■□□□□ 0.05
RAB3IP-201ENST00000247833 MSNP26038 577 aaKnown RBP15.37■□□□□ 0.05
RAB3IP-201ENST00000247833 KIAA1211Q6ZU35 1233 aa15.37■□□□□ 0.05
RAB3IP-201ENST00000247833 PHAXQ9H814 394 aaKnown RBP15.37■□□□□ 0.05
RAB3IP-201ENST00000247833 FLT4P35916 1363 aa15.36■□□□□ 0.05
RAB3IP-201ENST00000247833 SRGAP3O43295 1099 aa15.36■□□□□ 0.05
RAB3IP-201ENST00000247833 KIF20BQ96Q89 1820 aa15.36■□□□□ 0.05
RAB3IP-201ENST00000247833 KCNJ4P48050 445 aa15.36■□□□□ 0.05
RAB3IP-201ENST00000247833 TAF7Q15545 349 aaPredicted RBP15.36■□□□□ 0.05
RAB3IP-201ENST00000247833 PTMAP06454 111 aaKnown RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms