RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 ATP10DQ9P241 1426 aa26.98■■□□□ 1.91
SH2D3A-201ENST00000245908 FAM43AQ8N2R8 423 aa26.98■■□□□ 1.91
SH2D3A-201ENST00000245908 PTPRCP08575 1304 aa26.97■■□□□ 1.91
SH2D3A-201ENST00000245908 SLC26A8Q96RN1 970 aa26.97■■□□□ 1.91
SH2D3A-201ENST00000245908 ANKRD44Q8N8A2 993 aa26.96■■□□□ 1.91
SH2D3A-201ENST00000245908 EID1Q9Y6B2 187 aa26.96■■□□□ 1.91
SH2D3A-201ENST00000245908 DDIT3P35638 169 aa26.96■■□□□ 1.91
SH2D3A-201ENST00000245908 KIF2CQ99661 725 aa26.96■■□□□ 1.91
SH2D3A-201ENST00000245908 MAP3K19Q56UN5 1328 aa26.95■■□□□ 1.9
SH2D3A-201ENST00000245908 SBNO1A3KN83 1393 aa26.95■■□□□ 1.9
SH2D3A-201ENST00000245908 DIP2AQ14689 1571 aa26.94■■□□□ 1.9
SH2D3A-201ENST00000245908 RIMS1Q86UR5 1692 aaKnown RBP26.94■■□□□ 1.9
SH2D3A-201ENST00000245908 AMOTL2Q9Y2J4 779 aa26.94■■□□□ 1.9
SH2D3A-201ENST00000245908 FLT4P35916 1363 aa26.94■■□□□ 1.9
SH2D3A-201ENST00000245908 CDC45O75419 566 aa26.93■■□□□ 1.9
SH2D3A-201ENST00000245908 PLEKHM2Q8IWE5 1019 aa26.93■■□□□ 1.9
SH2D3A-201ENST00000245908 RPAP2Q8IXW5 612 aaPredicted RBP26.93■■□□□ 1.9
SH2D3A-201ENST00000245908 TBX22Q9Y458 520 aa26.93■■□□□ 1.9
SH2D3A-201ENST00000245908 KDRP35968 1356 aa26.92■■□□□ 1.9
SH2D3A-201ENST00000245908 MSH6P52701 1360 aa26.92■■□□□ 1.9
SH2D3A-201ENST00000245908 RGPD8O14715 1765 aaPredicted RBP26.92■■□□□ 1.9
SH2D3A-201ENST00000245908 GSPT1P15170 499 aaKnown RBP26.92■■□□□ 1.9
SH2D3A-201ENST00000245908 EIF5BO60841 1220 aaKnown RBP26.91■■□□□ 1.9
SH2D3A-201ENST00000245908 RTL1A6NKG5 1358 aa26.91■■□□□ 1.9
SH2D3A-201ENST00000245908 CEP85Q6P2H3 762 aa26.91■■□□□ 1.9
SH2D3A-201ENST00000245908 PIK3C2AO00443 1686 aa26.91■■□□□ 1.9
SH2D3A-201ENST00000245908 CEBPAP49715 358 aaPredicted RBP26.9■■□□□ 1.9
SH2D3A-201ENST00000245908 SOX12O15370 315 aa26.9■■□□□ 1.9
SH2D3A-201ENST00000245908 MTHFSDQ2M296 383 aaKnown RBP26.88■■□□□ 1.89
SH2D3A-201ENST00000245908 CIZ1Q9ULV3 898 aaPredicted RBP26.88■■□□□ 1.89
SH2D3A-201ENST00000245908 TTC22Q5TAA0 569 aa26.88■■□□□ 1.89
SH2D3A-201ENST00000245908 L1TD1Q5T7N2 865 aaKnown RBP26.87■■□□□ 1.89
SH2D3A-201ENST00000245908 IGSF1Q8N6C5 1336 aa26.87■■□□□ 1.89
SH2D3A-201ENST00000245908 XRN1Q8IZH2 1706 aaKnown RBP26.87■■□□□ 1.89
SH2D3A-201ENST00000245908 HSP90AB1P08238 724 aaKnown RBP26.87■■□□□ 1.89
SH2D3A-201ENST00000245908 CEP170BQ9Y4F5 1589 aaPredicted RBP26.87■■□□□ 1.89
SH2D3A-201ENST00000245908 LRRC37A3O60309 1634 aa26.86■■□□□ 1.89
SH2D3A-201ENST00000245908 FOXO3O43524 673 aa26.86■■□□□ 1.89
SH2D3A-201ENST00000245908 SLC4A2P04920 1241 aa26.86■■□□□ 1.89
SH2D3A-201ENST00000245908 RTF1Q92541 710 aaKnown RBP26.86■■□□□ 1.89
SH2D3A-201ENST00000245908 NGDNQ8NEJ9 315 aaKnown RBP26.85■■□□□ 1.89
SH2D3A-201ENST00000245908 MEIS3Q99687 375 aa26.85■■□□□ 1.89
SH2D3A-201ENST00000245908 TSPYL4Q9UJ04 414 aa26.85■■□□□ 1.89
SH2D3A-201ENST00000245908 DDX11L8A8MPP1 907 aa26.84■■□□□ 1.89
SH2D3A-201ENST00000245908 GAS2L2Q8NHY3 880 aa26.83■■□□□ 1.89
SH2D3A-201ENST00000245908 EYA1Q99502 592 aa26.83■■□□□ 1.89
SH2D3A-201ENST00000245908 USP54Q70EL1 1684 aa26.83■■□□□ 1.89
SH2D3A-201ENST00000245908 MIS18AQ9NYP9 233 aa26.83■■□□□ 1.89
SH2D3A-201ENST00000245908 AMPHP49418 695 aa26.82■■□□□ 1.88
SH2D3A-201ENST00000245908 C16orf71Q8IYS4 520 aaPredicted RBP26.82■■□□□ 1.88
SH2D3A-201ENST00000245908 ANKARQ7Z5J8 1434 aa26.82■■□□□ 1.88
SH2D3A-201ENST00000245908 MARF1Q9Y4F3 1742 aaKnown RBP26.82■■□□□ 1.88
SH2D3A-201ENST00000245908 K7ELQ4 463 aaPredicted RBP26.82■■□□□ 1.88
SH2D3A-201ENST00000245908 CD2BP2O95400 341 aaKnown RBP26.82■■□□□ 1.88
SH2D3A-201ENST00000245908 FER1L4A9Z1Z3 1794 aa26.82■■□□□ 1.88
SH2D3A-201ENST00000245908 TRAK2O60296 914 aa26.81■■□□□ 1.88
SH2D3A-201ENST00000245908 HTATSF1O43719 755 aaKnown RBP26.8■■□□□ 1.88
SH2D3A-201ENST00000245908 CCT4P50991 539 aaKnown RBP26.79■■□□□ 1.88
SH2D3A-201ENST00000245908 G2E3Q7L622 706 aa26.79■■□□□ 1.88
SH2D3A-201ENST00000245908 FSD2A1L4K1 749 aa26.78■■□□□ 1.88
SH2D3A-201ENST00000245908 RAB3GAP1Q15042 981 aa26.78■■□□□ 1.88
SH2D3A-201ENST00000245908 OTUD7AQ8TE49 926 aaPredicted RBP26.78■■□□□ 1.88
SH2D3A-201ENST00000245908 RBM42Q9BTD8 480 aaKnown RBP26.78■■□□□ 1.88
SH2D3A-201ENST00000245908 FAM208AQ9UK61 1670 aaKnown RBP26.78■■□□□ 1.88
SH2D3A-201ENST00000245908 THEMISQ8N1K5 641 aaPredicted RBP26.78■■□□□ 1.88
SH2D3A-201ENST00000245908 TNPO1Q92973 898 aaKnown RBP26.78■■□□□ 1.88
SH2D3A-201ENST00000245908 NWD1Q149M9 1564 aa26.77■■□□□ 1.88
SH2D3A-201ENST00000245908 HMMRO75330 724 aa26.77■■□□□ 1.88
SH2D3A-201ENST00000245908 SMARCA5O60264 1052 aaPredicted RBP26.75■■□□□ 1.87
SH2D3A-201ENST00000245908 GOLGA6L3A6NEY3 463 aa26.74■■□□□ 1.87
SH2D3A-201ENST00000245908 NLRP6P59044 892 aa26.74■■□□□ 1.87
SH2D3A-201ENST00000245908 RABEP1Q15276 862 aa26.74■■□□□ 1.87
SH2D3A-201ENST00000245908 SDSP20132 328 aa26.74■■□□□ 1.87
SH2D3A-201ENST00000245908 USP26Q9BXU7 913 aa26.74■■□□□ 1.87
SH2D3A-201ENST00000245908 F6X3S4 739 aa26.73■■□□□ 1.87
SH2D3A-201ENST00000245908 HSP90AA1P07900 732 aaKnown RBP26.73■■□□□ 1.87
SH2D3A-201ENST00000245908 HOXC9P31274 260 aa26.73■■□□□ 1.87
SH2D3A-201ENST00000245908 GBP4Q96PP9 640 aa26.73■■□□□ 1.87
SH2D3A-201ENST00000245908 SLC4A10Q6U841 1118 aa26.73■■□□□ 1.87
SH2D3A-201ENST00000245908 CACNA1FO60840 1977 aa26.72■■□□□ 1.87
SH2D3A-201ENST00000245908 STK31Q9BXU1 1019 aa26.72■■□□□ 1.87
SH2D3A-201ENST00000245908 GZF1Q9H116 711 aaPredicted RBP26.72■■□□□ 1.87
SH2D3A-201ENST00000245908 N4BP2Q86UW6 1770 aaPredicted RBP26.72■■□□□ 1.87
SH2D3A-201ENST00000245908 GNAT3A8MTJ3 354 aa26.72■■□□□ 1.87
SH2D3A-201ENST00000245908 CASC1Q6TDU7 716 aa26.7■■□□□ 1.87
SH2D3A-201ENST00000245908 SOS1Q07889 1333 aaPredicted RBP26.7■■□□□ 1.86
SH2D3A-201ENST00000245908 APBB1O00213 710 aa26.7■■□□□ 1.86
SH2D3A-201ENST00000245908 OSBPL3Q9H4L5 887 aa26.7■■□□□ 1.86
SH2D3A-201ENST00000245908 GNAI2P04899 355 aa26.69■■□□□ 1.86
SH2D3A-201ENST00000245908 CCDC30Q5VVM6 783 aa26.69■■□□□ 1.86
SH2D3A-201ENST00000245908 MAP3K5Q99683 1374 aa26.69■■□□□ 1.86
SH2D3A-201ENST00000245908 XRCC6P12956 609 aaKnown RBP eCLIP26.68■■□□□ 1.86
SH2D3A-201ENST00000245908 KCNA6P17658 529 aa26.68■■□□□ 1.86
SH2D3A-201ENST00000245908 PTMSP20962 102 aa26.68■■□□□ 1.86
SH2D3A-201ENST00000245908 FLIIQ13045 1269 aa26.68■■□□□ 1.86
SH2D3A-201ENST00000245908 FOXD4L1Q9NU39 408 aa26.68■■□□□ 1.86
SH2D3A-201ENST00000245908 BABAM1Q9NWV8 329 aa26.68■■□□□ 1.86
SH2D3A-201ENST00000245908 PLPPR3Q6T4P5 718 aa26.67■■□□□ 1.86
SH2D3A-201ENST00000245908 TUBGCP6Q96RT7 1819 aa26.65■■□□□ 1.86
SH2D3A-201ENST00000245908 PXDNLA1KZ92 1463 aa26.64■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms