RNA–Protein interactions for RNA: ENST00000244050.2

SNAI1-201, Transcript of snail family transcriptional repressor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAI1, Length 1,686 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI1-201ENST00000244050 GJD4Q96KN9 370 aaPredicted RBP16.25■□□□□ 0.19
SNAI1-201ENST00000244050 LTN1O94822 1766 aa16.25■□□□□ 0.19
SNAI1-201ENST00000244050 SLIT2O94813 1529 aa16.25■□□□□ 0.19
SNAI1-201ENST00000244050 RLBP1P12271 317 aa16.24■□□□□ 0.19
SNAI1-201ENST00000244050 ZKSCAN2Q63HK3 967 aa16.24■□□□□ 0.19
SNAI1-201ENST00000244050 RGPD1P0DJD0 1748 aa16.24■□□□□ 0.19
SNAI1-201ENST00000244050 TRPM3Q9HCF6 1732 aaPredicted RBP16.24■□□□□ 0.19
SNAI1-201ENST00000244050 EXOSC9Q06265 439 aaKnown RBP16.24■□□□□ 0.19
SNAI1-201ENST00000244050 C8orf34Q49A92 452 aa16.24■□□□□ 0.19
SNAI1-201ENST00000244050 NPM2Q86SE8 214 aaKnown RBP16.24■□□□□ 0.19
SNAI1-201ENST00000244050 TSR2Q969E8 191 aaKnown RBP16.24■□□□□ 0.19
SNAI1-201ENST00000244050 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.23■□□□□ 0.19
SNAI1-201ENST00000244050 GLI3P10071 1580 aa16.23■□□□□ 0.19
SNAI1-201ENST00000244050 KRT28Q7Z3Y7 464 aa16.23■□□□□ 0.19
SNAI1-201ENST00000244050 BCL2L13Q9BXK5 485 aa16.23■□□□□ 0.19
SNAI1-201ENST00000244050 DLG5Q8TDM6 1919 aa16.22■□□□□ 0.19
SNAI1-201ENST00000244050 MVPQ14764 893 aaKnown RBP16.21■□□□□ 0.19
SNAI1-201ENST00000244050 UNC5CLQ8IV45 518 aa16.21■□□□□ 0.19
SNAI1-201ENST00000244050 DDRGK1Q96HY6 314 aa16.21■□□□□ 0.19
SNAI1-201ENST00000244050 KIF24Q5T7B8 1368 aa16.21■□□□□ 0.19
SNAI1-201ENST00000244050 RGS3P49796 1198 aa16.21■□□□□ 0.18
SNAI1-201ENST00000244050 DZIP1LQ8IYY4 767 aaKnown RBP16.21■□□□□ 0.18
SNAI1-201ENST00000244050 PHACTR3Q96KR7 559 aa16.21■□□□□ 0.18
SNAI1-201ENST00000244050 TNNQ9UQP3 1299 aa16.21■□□□□ 0.18
SNAI1-201ENST00000244050 NFE2L2Q16236 605 aa16.2■□□□□ 0.18
SNAI1-201ENST00000244050 SULT6B1Q6IMI4 303 aa16.2■□□□□ 0.18
SNAI1-201ENST00000244050 SMC4Q9NTJ3 1288 aa16.2■□□□□ 0.18
SNAI1-201ENST00000244050 PCDHB15Q9Y5E8 787 aa16.2■□□□□ 0.18
SNAI1-201ENST00000244050 NFAT5O94916 1531 aa16.2■□□□□ 0.18
SNAI1-201ENST00000244050 TNS3Q68CZ2 1445 aa16.2■□□□□ 0.18
SNAI1-201ENST00000244050 SSH1Q8WYL5 1049 aa16.19■□□□□ 0.18
SNAI1-201ENST00000244050 ZNF428Q96B54 188 aa16.19■□□□□ 0.18
SNAI1-201ENST00000244050 ARHGEF10O15013 1369 aa16.18■□□□□ 0.18
SNAI1-201ENST00000244050 HOXC9P31274 260 aa16.18■□□□□ 0.18
SNAI1-201ENST00000244050 CALD1Q05682 793 aaKnown RBP16.18■□□□□ 0.18
SNAI1-201ENST00000244050 ALDH1L2Q3SY69 923 aa16.18■□□□□ 0.18
SNAI1-201ENST00000244050 LMOD2Q6P5Q4 547 aa16.18■□□□□ 0.18
SNAI1-201ENST00000244050 AEBP1Q8IUX7 1158 aa16.18■□□□□ 0.18
SNAI1-201ENST00000244050 KCNH5Q8NCM2 988 aa16.18■□□□□ 0.18
SNAI1-201ENST00000244050 CABLES1Q8TDN4 633 aa16.18■□□□□ 0.18
SNAI1-201ENST00000244050 RWDD1Q9H446 243 aaPredicted RBP16.18■□□□□ 0.18
SNAI1-201ENST00000244050 RTL1A6NKG5 1358 aa16.18■□□□□ 0.18
SNAI1-201ENST00000244050 ALS2Q96Q42 1657 aa16.18■□□□□ 0.18
SNAI1-201ENST00000244050 BRPF1P55201 1214 aaPredicted RBP16.18■□□□□ 0.18
SNAI1-201ENST00000244050 CCDC125Q86Z20 511 aa16.18■□□□□ 0.18
SNAI1-201ENST00000244050 ATF7IPQ6VMQ6 1270 aa16.17■□□□□ 0.18
SNAI1-201ENST00000244050 FTSJ3Q8IY81 847 aaKnown RBP16.17■□□□□ 0.18
SNAI1-201ENST00000244050 SLIT3O75094 1523 aa16.16■□□□□ 0.18
SNAI1-201ENST00000244050 PHRF1Q9P1Y6 1649 aaKnown RBP16.16■□□□□ 0.18
SNAI1-201ENST00000244050 TRIM27P14373 513 aa16.16■□□□□ 0.18
SNAI1-201ENST00000244050 IPO8O15397 1037 aaKnown RBP16.15■□□□□ 0.18
SNAI1-201ENST00000244050 LMOD3Q0VAK6 560 aa16.15■□□□□ 0.18
SNAI1-201ENST00000244050 DDX19BQ9UMR2 479 aa16.15■□□□□ 0.18
SNAI1-201ENST00000244050 KIF16BQ96L93 1317 aa16.15■□□□□ 0.18
SNAI1-201ENST00000244050 ABCA3Q99758 1704 aa16.15■□□□□ 0.18
SNAI1-201ENST00000244050 BRWD3Q6RI45 1802 aa16.15■□□□□ 0.18
SNAI1-201ENST00000244050 PLEKHG5O94827 1062 aa16.14■□□□□ 0.18
SNAI1-201ENST00000244050 VPS72Q15906 364 aa16.14■□□□□ 0.18
SNAI1-201ENST00000244050 IGSF1Q8N6C5 1336 aa16.14■□□□□ 0.17
SNAI1-201ENST00000244050 ZBTB7CA1YPR0 619 aa16.14■□□□□ 0.17
SNAI1-201ENST00000244050 EYA1Q99502 592 aa16.14■□□□□ 0.17
SNAI1-201ENST00000244050 IFT57Q9NWB7 429 aa16.14■□□□□ 0.17
SNAI1-201ENST00000244050 NOB1Q9ULX3 412 aaKnown RBP16.14■□□□□ 0.17
SNAI1-201ENST00000244050 PLCH1Q4KWH8 1693 aa16.13■□□□□ 0.17
SNAI1-201ENST00000244050 ONECUT3O60422 494 aaPredicted RBP16.13■□□□□ 0.17
SNAI1-201ENST00000244050 GCP02774 474 aa16.13■□□□□ 0.17
SNAI1-201ENST00000244050 ZNF853P0CG23 659 aa16.13■□□□□ 0.17
SNAI1-201ENST00000244050 GNAI1P63096 354 aa16.13■□□□□ 0.17
SNAI1-201ENST00000244050 SEPT12Q8IYM1 358 aa16.12■□□□□ 0.17
SNAI1-201ENST00000244050 IP6K1Q92551 441 aa16.12■□□□□ 0.17
SNAI1-201ENST00000244050 LTV1Q96GA3 475 aaPredicted RBP16.12■□□□□ 0.17
SNAI1-201ENST00000244050 USP19O94966 1318 aa16.12■□□□□ 0.17
SNAI1-201ENST00000244050 KDRP35968 1356 aa16.12■□□□□ 0.17
SNAI1-201ENST00000244050 NWD2Q9ULI1 1742 aa16.12■□□□□ 0.17
SNAI1-201ENST00000244050 FAM83GA6ND36 823 aa16.11■□□□□ 0.17
SNAI1-201ENST00000244050 HDAC1Q13547 482 aaPredicted RBP16.11■□□□□ 0.17
SNAI1-201ENST00000244050 PDZRN3Q9UPQ7 1066 aa16.11■□□□□ 0.17
SNAI1-201ENST00000244050 HAP1P54257 671 aaPredicted RBP16.11■□□□□ 0.17
SNAI1-201ENST00000244050 DEFB132Q7Z7B7 95 aa16.11■□□□□ 0.17
SNAI1-201ENST00000244050 LAS1LQ9Y4W2 734 aaKnown RBP16.11■□□□□ 0.17
SNAI1-201ENST00000244050 VAMP4O75379 141 aa16.1■□□□□ 0.17
SNAI1-201ENST00000244050 THUMPD2Q9BTF0 503 aaKnown RBP16.1■□□□□ 0.17
SNAI1-201ENST00000244050 VIRMAQ69YN4 1812 aaKnown RBP16.1■□□□□ 0.17
SNAI1-201ENST00000244050 ARHGAP45Q92619 1136 aa16.09■□□□□ 0.17
SNAI1-201ENST00000244050 RGPD2P0DJD1 1756 aa16.09■□□□□ 0.17
SNAI1-201ENST00000244050 ARHGEF25Q86VW2 580 aa16.08■□□□□ 0.17
SNAI1-201ENST00000244050 ITPRIPQ8IWB1 547 aa16.08■□□□□ 0.17
SNAI1-201ENST00000244050 CFAP44Q96MT7 982 aa16.08■□□□□ 0.17
SNAI1-201ENST00000244050 ZBTB40Q9NUA8 1239 aa16.08■□□□□ 0.17
SNAI1-201ENST00000244050 TMEM57Q8N5G2 664 aa16.08■□□□□ 0.16
SNAI1-201ENST00000244050 NRAPQ86VF7 1730 aa16.07■□□□□ 0.16
SNAI1-201ENST00000244050 RGPD5Q99666 1765 aa16.07■□□□□ 0.16
SNAI1-201ENST00000244050 DCTN1Q14203 1278 aa16.07■□□□□ 0.16
SNAI1-201ENST00000244050 NBR1Q14596 966 aa16.07■□□□□ 0.16
SNAI1-201ENST00000244050 MBIPQ9NS73 344 aa16.07■□□□□ 0.16
SNAI1-201ENST00000244050 MRPL50Q8N5N7 158 aaKnown RBP16.06■□□□□ 0.16
SNAI1-201ENST00000244050 CCDC9Q9Y3X0 531 aaKnown RBP16.06■□□□□ 0.16
SNAI1-201ENST00000244050 CRYBG1Q9Y4K1 1723 aa16.06■□□□□ 0.16
SNAI1-201ENST00000244050 MTHFSDQ2M296 383 aaKnown RBP16.05■□□□□ 0.16
SNAI1-201ENST00000244050 KRT27Q7Z3Y8 459 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms