RNA–Protein interactions for RNA: ENST00000240100.6

DUSP4-201, Transcript of dual specificity phosphatase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DUSP4, Length 5,537 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP4-201ENST00000240100 NOS1P29475 1434 aa20.41■□□□□ 0.86
DUSP4-201ENST00000240100 ZSCAN25Q6NSZ9 544 aa20.41■□□□□ 0.86
DUSP4-201ENST00000240100 PTPRCP08575 1304 aa20.41■□□□□ 0.86
DUSP4-201ENST00000240100 DUOX2Q9NRD8 1548 aa20.41■□□□□ 0.86
DUSP4-201ENST00000240100 SIL1Q9H173 461 aa20.41■□□□□ 0.86
DUSP4-201ENST00000240100 PDE4CQ08493 712 aa20.4■□□□□ 0.86
DUSP4-201ENST00000240100 CEBPZQ03701 1054 aaKnown RBP20.4■□□□□ 0.86
DUSP4-201ENST00000240100 RBM33Q96EV2 1170 aaKnown RBP20.4■□□□□ 0.86
DUSP4-201ENST00000240100 IL1RAPL2Q9NP60 686 aa20.4■□□□□ 0.86
DUSP4-201ENST00000240100 BMP2KLQ5H9B9 411 aa20.4■□□□□ 0.86
DUSP4-201ENST00000240100 PRAG1Q86YV5 1406 aa20.39■□□□□ 0.86
DUSP4-201ENST00000240100 ME1P48163 572 aa20.39■□□□□ 0.86
DUSP4-201ENST00000240100 NOM1Q5C9Z4 860 aaKnown RBP20.39■□□□□ 0.86
DUSP4-201ENST00000240100 SLC3A2P08195 630 aaKnown RBP20.39■□□□□ 0.85
DUSP4-201ENST00000240100 CABP4P57796 275 aa20.39■□□□□ 0.85
DUSP4-201ENST00000240100 TBC1D32Q96NH3 1257 aa20.39■□□□□ 0.85
DUSP4-201ENST00000240100 THUMPD2Q9BTF0 503 aaKnown RBP20.39■□□□□ 0.85
DUSP4-201ENST00000240100 CD109Q6YHK3 1445 aa20.39■□□□□ 0.85
DUSP4-201ENST00000240100 UQCRHLA0A096LP55 91 aa20.39■□□□□ 0.85
DUSP4-201ENST00000240100 UQCRHP07919 91 aa20.39■□□□□ 0.85
DUSP4-201ENST00000240100 C14orf93Q9H972 538 aaKnown RBP20.39■□□□□ 0.85
DUSP4-201ENST00000240100 TCEAL9Q9UHQ7 104 aa20.39■□□□□ 0.85
DUSP4-201ENST00000240100 GLRX3O76003 335 aaKnown RBP20.39■□□□□ 0.85
DUSP4-201ENST00000240100 CDR1P51861 262 aa20.39■□□□□ 0.85
DUSP4-201ENST00000240100 CBFA2T2O43439 604 aa20.38■□□□□ 0.85
DUSP4-201ENST00000240100 CTNNA3Q9UI47 895 aa20.38■□□□□ 0.85
DUSP4-201ENST00000240100 EXOC6BQ9Y2D4 811 aa20.38■□□□□ 0.85
DUSP4-201ENST00000240100 TXLNAP40222 546 aa20.38■□□□□ 0.85
DUSP4-201ENST00000240100 RAD21O60216 631 aa20.38■□□□□ 0.85
DUSP4-201ENST00000240100 CASTP20810 708 aaKnown RBP20.37■□□□□ 0.85
DUSP4-201ENST00000240100 CCDC112Q8NEF3 446 aa20.37■□□□□ 0.85
DUSP4-201ENST00000240100 CDKL5O76039 1030 aa20.37■□□□□ 0.85
DUSP4-201ENST00000240100 CNNM1Q9NRU3 951 aa20.37■□□□□ 0.85
DUSP4-201ENST00000240100 FYB1O15117 783 aa20.37■□□□□ 0.85
DUSP4-201ENST00000240100 MCM10Q7L590 875 aa20.37■□□□□ 0.85
DUSP4-201ENST00000240100 SYCE3A1L190 88 aa20.37■□□□□ 0.85
DUSP4-201ENST00000240100 RRP9O43818 475 aaKnown RBP20.37■□□□□ 0.85
DUSP4-201ENST00000240100 RBM10P98175 930 aaKnown RBP20.37■□□□□ 0.85
DUSP4-201ENST00000240100 FMNL2Q96PY5 1086 aa20.37■□□□□ 0.85
DUSP4-201ENST00000240100 IGHDP01880 384 aa20.37■□□□□ 0.85
DUSP4-201ENST00000240100 NAP1L1P55209 391 aaKnown RBP20.37■□□□□ 0.85
DUSP4-201ENST00000240100 NUTM1Q86Y26 1132 aa20.37■□□□□ 0.85
DUSP4-201ENST00000240100 TNPO1Q92973 898 aaKnown RBP20.37■□□□□ 0.85
DUSP4-201ENST00000240100 CCDC66A2RUB6 948 aa20.36■□□□□ 0.85
DUSP4-201ENST00000240100 TRIM22Q8IYM9 498 aa20.36■□□□□ 0.85
DUSP4-201ENST00000240100 HDAC1Q13547 482 aaPredicted RBP20.36■□□□□ 0.85
DUSP4-201ENST00000240100 CWC15Q9P013 229 aaKnown RBP20.36■□□□□ 0.85
DUSP4-201ENST00000240100 ARHGEF12Q9NZN5 1544 aa20.36■□□□□ 0.85
DUSP4-201ENST00000240100 SERPINC1P01008 464 aa20.36■□□□□ 0.85
DUSP4-201ENST00000240100 CEP57L1Q8IYX8 460 aa20.36■□□□□ 0.85
DUSP4-201ENST00000240100 MAP3K11Q16584 847 aa20.35■□□□□ 0.85
DUSP4-201ENST00000240100 SH2B1Q9NRF2 756 aaPredicted RBP20.35■□□□□ 0.85
DUSP4-201ENST00000240100 SMARCA5O60264 1052 aaPredicted RBP20.35■□□□□ 0.85
DUSP4-201ENST00000240100 PROSER2Q86WR7 435 aaPredicted RBP20.35■□□□□ 0.85
DUSP4-201ENST00000240100 NACAP1Q9BZK3 213 aa20.35■□□□□ 0.85
DUSP4-201ENST00000240100 CAGE1Q8TC20 777 aa20.35■□□□□ 0.85
DUSP4-201ENST00000240100 CCDC183Q5T5S1 534 aa20.35■□□□□ 0.85
DUSP4-201ENST00000240100 MAGEC2Q9UBF1 373 aaPredicted RBP20.35■□□□□ 0.85
DUSP4-201ENST00000240100 ANO8Q9HCE9 1232 aaPredicted RBP20.34■□□□□ 0.85
DUSP4-201ENST00000240100 GNL3LQ9NVN8 582 aaKnown RBP20.34■□□□□ 0.85
DUSP4-201ENST00000240100 KCNH5Q8NCM2 988 aa20.34■□□□□ 0.85
DUSP4-201ENST00000240100 MYL6BP14649 208 aa20.33■□□□□ 0.85
DUSP4-201ENST00000240100 FANCAO15360 1455 aa20.33■□□□□ 0.85
DUSP4-201ENST00000240100 NUP153P49790 1475 aaKnown RBP20.33■□□□□ 0.84
DUSP4-201ENST00000240100 CCDC69A6NI79 296 aa20.33■□□□□ 0.84
DUSP4-201ENST00000240100 NME9Q86XW9 330 aa20.33■□□□□ 0.84
DUSP4-201ENST00000240100 TAF7Q15545 349 aaPredicted RBP20.33■□□□□ 0.84
DUSP4-201ENST00000240100 CCDC57Q2TAC2 916 aa20.33■□□□□ 0.84
DUSP4-201ENST00000240100 WAPLQ7Z5K2 1190 aa20.33■□□□□ 0.84
DUSP4-201ENST00000240100 CTDP1Q9Y5B0 961 aaPredicted RBP20.33■□□□□ 0.84
DUSP4-201ENST00000240100 SSFA2P28290 1259 aa20.32■□□□□ 0.84
DUSP4-201ENST00000240100 KDM4AO75164 1064 aa20.32■□□□□ 0.84
DUSP4-201ENST00000240100 EPS15P42566 896 aa20.32■□□□□ 0.84
DUSP4-201ENST00000240100 ARHGAP45Q92619 1136 aa20.32■□□□□ 0.84
DUSP4-201ENST00000240100 DCTN1Q14203 1278 aa20.32■□□□□ 0.84
DUSP4-201ENST00000240100 RRP12Q5JTH9 1297 aaKnown RBP20.32■□□□□ 0.84
DUSP4-201ENST00000240100 TBC1D9Q6ZT07 1266 aa20.32■□□□□ 0.84
DUSP4-201ENST00000240100 KDM5BQ9UGL1 1544 aa20.32■□□□□ 0.84
DUSP4-201ENST00000240100 WASLO00401 505 aaPredicted RBP20.31■□□□□ 0.84
DUSP4-201ENST00000240100 TTC21BQ7Z4L5 1316 aa20.31■□□□□ 0.84
DUSP4-201ENST00000240100 SMTNL1A8MU46 457 aa20.31■□□□□ 0.84
DUSP4-201ENST00000240100 RBM42Q9BTD8 480 aaKnown RBP20.31■□□□□ 0.84
DUSP4-201ENST00000240100 EMILIN1Q9Y6C2 1016 aa20.31■□□□□ 0.84
DUSP4-201ENST00000240100 ZNF608Q9ULD9 1512 aaPredicted RBP20.3■□□□□ 0.84
DUSP4-201ENST00000240100 ATP2B1P20020 1258 aa20.3■□□□□ 0.84
DUSP4-201ENST00000240100 SHANK2Q9UPX8 1470 aa20.3■□□□□ 0.84
DUSP4-201ENST00000240100 MIS18AQ9NYP9 233 aa20.3■□□□□ 0.84
DUSP4-201ENST00000240100 NUCB1Q02818 461 aa20.3■□□□□ 0.84
DUSP4-201ENST00000240100 PPFIBP1Q86W92 1011 aa20.3■□□□□ 0.84
DUSP4-201ENST00000240100 WDR62O43379 1518 aa20.3■□□□□ 0.84
DUSP4-201ENST00000240100 SLC26A8Q96RN1 970 aa20.29■□□□□ 0.84
DUSP4-201ENST00000240100 SCAND2PQ9GZW5 306 aaPredicted RBP20.29■□□□□ 0.84
DUSP4-201ENST00000240100 CCDC83Q8IWF9 413 aa20.29■□□□□ 0.84
DUSP4-201ENST00000240100 BCL11BQ9C0K0 894 aaPredicted RBP20.29■□□□□ 0.84
DUSP4-201ENST00000240100 CEP126Q9P2H0 1117 aa20.29■□□□□ 0.84
DUSP4-201ENST00000240100 KIF21AQ7Z4S6 1674 aa20.29■□□□□ 0.84
DUSP4-201ENST00000240100 POLR3AO14802 1390 aaPredicted RBP20.29■□□□□ 0.84
DUSP4-201ENST00000240100 MEX3CQ5U5Q3 659 aaKnown RBP20.29■□□□□ 0.84
DUSP4-201ENST00000240100 WASF1Q92558 559 aa20.28■□□□□ 0.84
DUSP4-201ENST00000240100 UPF3BQ9BZI7 483 aaKnown RBP20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms