RNA–Protein interactions for RNA: ENST00000238831.8

YIPF4-201, Transcript of Yip1 domain family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene YIPF4, Length 11,949 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4-201ENST00000238831 MRPS9P82933 396 aaKnown RBP10.17□□□□□ -0.78
YIPF4-201ENST00000238831 PABPN1LA6NDY0 278 aaKnown RBP10.17□□□□□ -0.78
YIPF4-201ENST00000238831 CDKL5O76039 1030 aa10.17□□□□□ -0.78
YIPF4-201ENST00000238831 CCDC96Q2M329 555 aa10.17□□□□□ -0.78
YIPF4-201ENST00000238831 CCDC102AQ96A19 550 aa10.17□□□□□ -0.78
YIPF4-201ENST00000238831 ZBED9Q6R2W3 1325 aa10.17□□□□□ -0.78
YIPF4-201ENST00000238831 SLC4A2P04920 1241 aa10.17□□□□□ -0.78
YIPF4-201ENST00000238831 DDX23Q9BUQ8 820 aaKnown RBP10.17□□□□□ -0.78
YIPF4-201ENST00000238831 DNA2P51530 1060 aa10.17□□□□□ -0.78
YIPF4-201ENST00000238831 TRAK2O60296 914 aa10.16□□□□□ -0.78
YIPF4-201ENST00000238831 CCDC178Q5BJE1 867 aa10.16□□□□□ -0.78
YIPF4-201ENST00000238831 MINDY4BA8MYZ0 360 aa10.16□□□□□ -0.78
YIPF4-201ENST00000238831 ERLIN1O75477 346 aa10.16□□□□□ -0.78
YIPF4-201ENST00000238831 MKNK2Q9HBH9 465 aa10.16□□□□□ -0.78
YIPF4-201ENST00000238831 BCCIPQ9P287 314 aaKnown RBP eCLIP10.16□□□□□ -0.78
YIPF4-201ENST00000238831 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.16□□□□□ -0.78
YIPF4-201ENST00000238831 MBD3O95983 291 aa10.16□□□□□ -0.78
YIPF4-201ENST00000238831 LARP1BQ659C4 914 aaKnown RBP10.16□□□□□ -0.78
YIPF4-201ENST00000238831 ZNF530Q6P9A1 599 aaPredicted RBP10.16□□□□□ -0.78
YIPF4-201ENST00000238831 CTNNA2P26232 953 aa10.16□□□□□ -0.78
YIPF4-201ENST00000238831 XPCQ01831 940 aaPredicted RBP10.16□□□□□ -0.78
YIPF4-201ENST00000238831 PRKAR2BP31323 418 aa10.16□□□□□ -0.78
YIPF4-201ENST00000238831 HOOK3Q86VS8 718 aa10.16□□□□□ -0.78
YIPF4-201ENST00000238831 NOB1Q9ULX3 412 aaKnown RBP10.16□□□□□ -0.78
YIPF4-201ENST00000238831 MCM2P49736 904 aa10.15□□□□□ -0.78
YIPF4-201ENST00000238831 LARP1Q6PKG0 1096 aaKnown RBP10.15□□□□□ -0.78
YIPF4-201ENST00000238831 AEBP1Q8IUX7 1158 aa10.15□□□□□ -0.78
YIPF4-201ENST00000238831 SMARCA2P51531 1590 aa10.15□□□□□ -0.78
YIPF4-201ENST00000238831 BTBD11A6QL63 1104 aa10.15□□□□□ -0.78
YIPF4-201ENST00000238831 SMC1AQ14683 1233 aaKnown RBP10.15□□□□□ -0.78
YIPF4-201ENST00000238831 TWISTNBQ3B726 338 aaPredicted RBP10.15□□□□□ -0.78
YIPF4-201ENST00000238831 SERPINA10Q9UK55 444 aa10.15□□□□□ -0.78
YIPF4-201ENST00000238831 ZNF354CQ86Y25 554 aa10.15□□□□□ -0.78
YIPF4-201ENST00000238831 VTI1AQ96AJ9 217 aa10.15□□□□□ -0.78
YIPF4-201ENST00000238831 PRDM11Q9NQV5 511 aa10.15□□□□□ -0.78
YIPF4-201ENST00000238831 PTPRGP23470 1445 aa10.15□□□□□ -0.79
YIPF4-201ENST00000238831 CWC27Q6UX04 472 aaKnown RBP10.15□□□□□ -0.79
YIPF4-201ENST00000238831 AIDAQ96BJ3 306 aa10.15□□□□□ -0.79
YIPF4-201ENST00000238831 CNTLNQ9NXG0 1405 aa10.15□□□□□ -0.79
YIPF4-201ENST00000238831 MRE11P49959 708 aa10.14□□□□□ -0.79
YIPF4-201ENST00000238831 CCDC148Q8NFR7 591 aa10.14□□□□□ -0.79
YIPF4-201ENST00000238831 PPM1EQ8WY54 764 aa10.14□□□□□ -0.79
YIPF4-201ENST00000238831 CUL5Q93034 780 aa10.14□□□□□ -0.79
YIPF4-201ENST00000238831 PRKRIP1Q9H875 184 aaPredicted RBP10.14□□□□□ -0.79
YIPF4-201ENST00000238831 KRT85P78386 507 aa10.14□□□□□ -0.79
YIPF4-201ENST00000238831 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.14□□□□□ -0.79
YIPF4-201ENST00000238831 GIMAP7Q8NHV1 300 aa10.14□□□□□ -0.79
YIPF4-201ENST00000238831 TSG101Q99816 390 aa10.14□□□□□ -0.79
YIPF4-201ENST00000238831 SSX2IPQ9Y2D8 614 aa10.14□□□□□ -0.79
YIPF4-201ENST00000238831 KLHL10Q6JEL2 608 aa10.14□□□□□ -0.79
YIPF4-201ENST00000238831 SPATA32Q96LK8 384 aa10.14□□□□□ -0.79
YIPF4-201ENST00000238831 SULT6B1Q6IMI4 303 aa10.14□□□□□ -0.79
YIPF4-201ENST00000238831 DZIP1Q86YF9 867 aaKnown RBP10.14□□□□□ -0.79
YIPF4-201ENST00000238831 PUF60Q9UHX1 559 aaKnown RBP10.14□□□□□ -0.79
YIPF4-201ENST00000238831 METTL24Q5JXM2 366 aa10.14□□□□□ -0.79
YIPF4-201ENST00000238831 CACNA2D4Q7Z3S7 1137 aa10.14□□□□□ -0.79
YIPF4-201ENST00000238831 MAP3K9P80192 1104 aa10.13□□□□□ -0.79
YIPF4-201ENST00000238831 CEP126Q9P2H0 1117 aa10.13□□□□□ -0.79
YIPF4-201ENST00000238831 ZNF287Q9HBT7 754 aa10.13□□□□□ -0.79
YIPF4-201ENST00000238831 PODXL2Q9NZ53 605 aa10.13□□□□□ -0.79
YIPF4-201ENST00000238831 BLOC1S2Q6QNY1 142 aa10.13□□□□□ -0.79
YIPF4-201ENST00000238831 DDX11Q96FC9 970 aa10.13□□□□□ -0.79
YIPF4-201ENST00000238831 ERICH4A6NGS2 130 aa10.13□□□□□ -0.79
YIPF4-201ENST00000238831 CEP131Q9UPN4 1083 aa10.13□□□□□ -0.79
YIPF4-201ENST00000238831 IFFO1Q0D2I5 559 aa10.13□□□□□ -0.79
YIPF4-201ENST00000238831 SPA17Q15506 151 aa10.13□□□□□ -0.79
YIPF4-201ENST00000238831 JAKMIP1Q96N16 626 aaKnown RBP10.13□□□□□ -0.79
YIPF4-201ENST00000238831 ARL1P40616 181 aaPredicted RBP10.13□□□□□ -0.79
YIPF4-201ENST00000238831 ZNF652Q9Y2D9 606 aa10.13□□□□□ -0.79
YIPF4-201ENST00000238831 BCAR3O75815 825 aa10.13□□□□□ -0.79
YIPF4-201ENST00000238831 ECM2O94769 699 aaPredicted RBP10.12□□□□□ -0.79
YIPF4-201ENST00000238831 CAVIN4Q5BKX8 364 aa10.12□□□□□ -0.79
YIPF4-201ENST00000238831 SPTY2D1Q68D10 685 aaPredicted RBP10.12□□□□□ -0.79
YIPF4-201ENST00000238831 MTERF4Q7Z6M4 381 aaKnown RBP10.12□□□□□ -0.79
YIPF4-201ENST00000238831 PDRG1Q9NUG6 133 aa10.12□□□□□ -0.79
YIPF4-201ENST00000238831 HMGB1P09429 215 aaKnown RBP10.12□□□□□ -0.79
YIPF4-201ENST00000238831 LMAN1P49257 510 aa10.12□□□□□ -0.79
YIPF4-201ENST00000238831 WASF1Q92558 559 aa10.12□□□□□ -0.79
YIPF4-201ENST00000238831 RPGRQ92834 1020 aaKnown RBP10.12□□□□□ -0.79
YIPF4-201ENST00000238831 ARHGAP29Q52LW3 1261 aa10.12□□□□□ -0.79
YIPF4-201ENST00000238831 FEZ1Q99689 392 aa10.12□□□□□ -0.79
YIPF4-201ENST00000238831 CTNNA3Q9UI47 895 aa10.12□□□□□ -0.79
YIPF4-201ENST00000238831 UPF3BQ9BZI7 483 aaKnown RBP10.12□□□□□ -0.79
YIPF4-201ENST00000238831 USP8P40818 1118 aa10.12□□□□□ -0.79
YIPF4-201ENST00000238831 IMMTQ16891 758 aaKnown RBP10.12□□□□□ -0.79
YIPF4-201ENST00000238831 CFAP100Q494V2 611 aa10.12□□□□□ -0.79
YIPF4-201ENST00000238831 FILIP1Q7Z7B0 1213 aa10.12□□□□□ -0.79
YIPF4-201ENST00000238831 TICAM2Q86XR7 235 aa10.12□□□□□ -0.79
YIPF4-201ENST00000238831 STARD3NLO95772 234 aa10.12□□□□□ -0.79
YIPF4-201ENST00000238831 CCT4P50991 539 aaKnown RBP10.11□□□□□ -0.79
YIPF4-201ENST00000238831 EXOSC9Q06265 439 aaKnown RBP10.11□□□□□ -0.79
YIPF4-201ENST00000238831 MAPK8IP2Q13387 824 aaPredicted RBP10.11□□□□□ -0.79
YIPF4-201ENST00000238831 PRAM1Q96QH2 718 aa10.11□□□□□ -0.79
YIPF4-201ENST00000238831 SLC4A8Q2Y0W8 1093 aa10.11□□□□□ -0.79
YIPF4-201ENST00000238831 FKBP15Q5T1M5 1219 aa10.11□□□□□ -0.79
YIPF4-201ENST00000238831 LUZP1Q86V48 1076 aa10.11□□□□□ -0.79
YIPF4-201ENST00000238831 TSR2Q969E8 191 aaKnown RBP10.11□□□□□ -0.79
YIPF4-201ENST00000238831 WDR33Q9C0J8 1336 aaKnown RBP10.11□□□□□ -0.79
YIPF4-201ENST00000238831 SRGAP3O43295 1099 aa10.1□□□□□ -0.79
YIPF4-201ENST00000238831 FERP16591 822 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms