RNA–Protein interactions for RNA: ENST00000228437.9

PRDM4-201, Transcript of PR/SET domain 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PRDM4, Length 4,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-201ENST00000228437 FCHSD2O94868 740 aa17.42■□□□□ 0.38
PRDM4-201ENST00000228437 CPA1P15085 419 aa17.42■□□□□ 0.38
PRDM4-201ENST00000228437 TFIP11Q9UBB9 837 aaKnown RBP17.42■□□□□ 0.38
PRDM4-201ENST00000228437 TSPYL4Q9UJ04 414 aa17.42■□□□□ 0.38
PRDM4-201ENST00000228437 TRHP20396 242 aaPredicted RBP17.42■□□□□ 0.38
PRDM4-201ENST00000228437 PTGS1P23219 599 aa17.42■□□□□ 0.38
PRDM4-201ENST00000228437 SULT6B1Q6IMI4 303 aa17.42■□□□□ 0.38
PRDM4-201ENST00000228437 CCDC186Q7Z3E2 898 aa17.42■□□□□ 0.38
PRDM4-201ENST00000228437 ATP10BO94823 1461 aa17.41■□□□□ 0.38
PRDM4-201ENST00000228437 NLRP1Q9C000 1473 aa17.41■□□□□ 0.38
PRDM4-201ENST00000228437 PLA2R1Q13018 1463 aa17.41■□□□□ 0.38
PRDM4-201ENST00000228437 HOMER1Q86YM7 354 aa17.41■□□□□ 0.38
PRDM4-201ENST00000228437 SIRT2Q8IXJ6 389 aa17.41■□□□□ 0.38
PRDM4-201ENST00000228437 RPAP2Q8IXW5 612 aaPredicted RBP17.41■□□□□ 0.38
PRDM4-201ENST00000228437 COG3Q96JB2 828 aa17.41■□□□□ 0.38
PRDM4-201ENST00000228437 LRRCC1Q9C099 1032 aa17.41■□□□□ 0.38
PRDM4-201ENST00000228437 GNL2Q13823 731 aaKnown RBP17.4■□□□□ 0.38
PRDM4-201ENST00000228437 SPG7Q9UQ90 795 aa17.4■□□□□ 0.38
PRDM4-201ENST00000228437 ABCC11Q96J66 1382 aa17.4■□□□□ 0.38
PRDM4-201ENST00000228437 CHMP4AQ9BY43 222 aa17.4■□□□□ 0.38
PRDM4-201ENST00000228437 TNMDQ9H2S6 317 aa17.4■□□□□ 0.38
PRDM4-201ENST00000228437 H3BQV1 296 aa17.4■□□□□ 0.38
PRDM4-201ENST00000228437 FYB1O15117 783 aa17.4■□□□□ 0.38
PRDM4-201ENST00000228437 ATP2B3Q16720 1220 aa17.4■□□□□ 0.38
PRDM4-201ENST00000228437 IFFO2Q5TF58 517 aa17.4■□□□□ 0.38
PRDM4-201ENST00000228437 PIBF1Q8WXW3 757 aa17.4■□□□□ 0.38
PRDM4-201ENST00000228437 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.39■□□□□ 0.38
PRDM4-201ENST00000228437 DISP1Q96F81 1524 aa17.39■□□□□ 0.38
PRDM4-201ENST00000228437 PPFIA3O75145 1194 aa17.39■□□□□ 0.37
PRDM4-201ENST00000228437 DCTPP1Q9H773 170 aa17.39■□□□□ 0.37
PRDM4-201ENST00000228437 DNM1Q05193 864 aaKnown RBP17.39■□□□□ 0.37
PRDM4-201ENST00000228437 FAM173BQ6P4H8 233 aa17.39■□□□□ 0.37
PRDM4-201ENST00000228437 PALD1Q9ULE6 856 aa17.39■□□□□ 0.37
PRDM4-201ENST00000228437 NRDCO43847 1150 aa17.38■□□□□ 0.37
PRDM4-201ENST00000228437 MX1P20591 662 aa17.38■□□□□ 0.37
PRDM4-201ENST00000228437 CASTP20810 708 aaKnown RBP17.38■□□□□ 0.37
PRDM4-201ENST00000228437 PRDM4Q9UKN5 801 aa17.38■□□□□ 0.37
PRDM4-201ENST00000228437 POLR1AO95602 1720 aaPredicted RBP17.38■□□□□ 0.37
PRDM4-201ENST00000228437 LARP1BQ659C4 914 aaKnown RBP17.38■□□□□ 0.37
PRDM4-201ENST00000228437 TCEANC2Q96MN5 208 aa17.38■□□□□ 0.37
PRDM4-201ENST00000228437 NOS1P29475 1434 aa17.38■□□□□ 0.37
PRDM4-201ENST00000228437 PDE1AP54750 535 aa17.38■□□□□ 0.37
PRDM4-201ENST00000228437 OSCARQ8IYS5 282 aa17.38■□□□□ 0.37
PRDM4-201ENST00000228437 CDK19Q9BWU1 502 aa17.38■□□□□ 0.37
PRDM4-201ENST00000228437 GNAI2P04899 355 aa17.37■□□□□ 0.37
PRDM4-201ENST00000228437 PDE4CQ08493 712 aa17.37■□□□□ 0.37
PRDM4-201ENST00000228437 DMTNQ08495 405 aa17.37■□□□□ 0.37
PRDM4-201ENST00000228437 NUP62CLQ9H1M0 184 aa17.37■□□□□ 0.37
PRDM4-201ENST00000228437 NUP160Q12769 1436 aa17.37■□□□□ 0.37
PRDM4-201ENST00000228437 KDM5DQ9BY66 1539 aa17.37■□□□□ 0.37
PRDM4-201ENST00000228437 JAKMIP1Q96N16 626 aaKnown RBP17.37■□□□□ 0.37
PRDM4-201ENST00000228437 LETM1O95202 739 aaPredicted RBP17.37■□□□□ 0.37
PRDM4-201ENST00000228437 NECAB1Q8N987 351 aa17.37■□□□□ 0.37
PRDM4-201ENST00000228437 PPIP5K1Q6PFW1 1433 aa17.37■□□□□ 0.37
PRDM4-201ENST00000228437 STX6O43752 255 aa17.36■□□□□ 0.37
PRDM4-201ENST00000228437 ZFP91Q96JP5 570 aaPredicted RBP17.36■□□□□ 0.37
PRDM4-201ENST00000228437 ZDHHC9Q9Y397 364 aa17.36■□□□□ 0.37
PRDM4-201ENST00000228437 LUZP1Q86V48 1076 aa17.36■□□□□ 0.37
PRDM4-201ENST00000228437 AEBP1Q8IUX7 1158 aa17.36■□□□□ 0.37
PRDM4-201ENST00000228437 FAM177A1Q8N128 213 aaPredicted RBP17.36■□□□□ 0.37
PRDM4-201ENST00000228437 SRCIN1Q9C0H9 1055 aa17.36■□□□□ 0.37
PRDM4-201ENST00000228437 PYCARDQ9ULZ3 195 aa17.36■□□□□ 0.37
PRDM4-201ENST00000228437 SYCP2Q9BX26 1530 aa17.36■□□□□ 0.37
PRDM4-201ENST00000228437 NPC1L1Q9UHC9 1359 aa17.36■□□□□ 0.37
PRDM4-201ENST00000228437 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.36■□□□□ 0.37
PRDM4-201ENST00000228437 ZRANB1Q9UGI0 708 aa17.35■□□□□ 0.37
PRDM4-201ENST00000228437 GRIN2AQ12879 1464 aa17.35■□□□□ 0.37
PRDM4-201ENST00000228437 KDM4AO75164 1064 aa17.35■□□□□ 0.37
PRDM4-201ENST00000228437 ZKSCAN1P17029 563 aaPredicted RBP17.35■□□□□ 0.37
PRDM4-201ENST00000228437 DDIT3P35638 169 aa17.35■□□□□ 0.37
PRDM4-201ENST00000228437 ANKRD44Q8N8A2 993 aa17.35■□□□□ 0.37
PRDM4-201ENST00000228437 GTPBP4Q9BZE4 634 aaKnown RBP17.35■□□□□ 0.37
PRDM4-201ENST00000228437 ZBTB22O15209 634 aa17.35■□□□□ 0.37
PRDM4-201ENST00000228437 PDLIM2Q96JY6 352 aa17.35■□□□□ 0.37
PRDM4-201ENST00000228437 MAP3K11Q16584 847 aa17.34■□□□□ 0.37
PRDM4-201ENST00000228437 CCDC66A2RUB6 948 aa17.34■□□□□ 0.37
PRDM4-201ENST00000228437 LRMPQ12912 555 aa17.34■□□□□ 0.37
PRDM4-201ENST00000228437 SKIDA1Q1XH10 827 aa17.34■□□□□ 0.37
PRDM4-201ENST00000228437 CEP85Q6P2H3 762 aa17.34■□□□□ 0.37
PRDM4-201ENST00000228437 ESYT1Q9BSJ8 1104 aa17.34■□□□□ 0.37
PRDM4-201ENST00000228437 NME9Q86XW9 330 aa17.34■□□□□ 0.37
PRDM4-201ENST00000228437 ABCC2Q92887 1545 aa17.34■□□□□ 0.37
PRDM4-201ENST00000228437 POLR3GO15318 223 aaPredicted RBP17.33■□□□□ 0.37
PRDM4-201ENST00000228437 UBTFL1P0CB47 393 aaPredicted RBP17.33■□□□□ 0.37
PRDM4-201ENST00000228437 SYTL4Q96C24 671 aaPredicted RBP17.33■□□□□ 0.37
PRDM4-201ENST00000228437 NAA30Q147X3 362 aaPredicted RBP17.33■□□□□ 0.36
PRDM4-201ENST00000228437 AK9Q5TCS8 1911 aa17.33■□□□□ 0.36
PRDM4-201ENST00000228437 GJB2P29033 226 aa17.33■□□□□ 0.36
PRDM4-201ENST00000228437 KIAA0556O60303 1618 aa17.33■□□□□ 0.36
PRDM4-201ENST00000228437 TPM3P06753 285 aa17.32■□□□□ 0.36
PRDM4-201ENST00000228437 KRT85P78386 507 aa17.32■□□□□ 0.36
PRDM4-201ENST00000228437 PRPF40BQ6NWY9 871 aaKnown RBP17.32■□□□□ 0.36
PRDM4-201ENST00000228437 UBE2HP62256 183 aa17.32■□□□□ 0.36
PRDM4-201ENST00000228437 WAPLQ7Z5K2 1190 aa17.32■□□□□ 0.36
PRDM4-201ENST00000228437 ITSN2Q9NZM3 1697 aa17.32■□□□□ 0.36
PRDM4-201ENST00000228437 CLIP2Q9UDT6 1046 aa17.32■□□□□ 0.36
PRDM4-201ENST00000228437 BRD1O95696 1058 aa17.32■□□□□ 0.36
PRDM4-201ENST00000228437 ZSCAN22P10073 491 aaPredicted RBP17.32■□□□□ 0.36
PRDM4-201ENST00000228437 DDX11Q96FC9 970 aa17.32■□□□□ 0.36
PRDM4-201ENST00000228437 HTATSF1O43719 755 aaKnown RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms