RNA–Protein interactions for RNA: ENST00000228136.8

C11orf58-201, Transcript of chromosome 11 open reading frame 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf58, Length 2,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf58-201ENST00000228136 RAPGEF4Q8WZA2 1011 aa23.52■■□□□ 1.36
C11orf58-201ENST00000228136 IL16Q14005 1332 aa23.52■■□□□ 1.36
C11orf58-201ENST00000228136 MYH16Q9H6N6 1097 aa23.52■■□□□ 1.36
C11orf58-201ENST00000228136 LAS1LQ9Y4W2 734 aaKnown RBP23.52■■□□□ 1.36
C11orf58-201ENST00000228136 RCAN3Q9UKA8 241 aa23.51■■□□□ 1.35
C11orf58-201ENST00000228136 FANCIQ9NVI1 1328 aa23.51■■□□□ 1.35
C11orf58-201ENST00000228136 MAP3K5Q99683 1374 aa23.5■■□□□ 1.35
C11orf58-201ENST00000228136 GNAT3A8MTJ3 354 aa23.5■■□□□ 1.35
C11orf58-201ENST00000228136 PLEKHO1Q53GL0 409 aaPredicted RBP23.5■■□□□ 1.35
C11orf58-201ENST00000228136 RTF1Q92541 710 aaKnown RBP23.5■■□□□ 1.35
C11orf58-201ENST00000228136 ZNF530Q6P9A1 599 aaPredicted RBP23.49■■□□□ 1.35
C11orf58-201ENST00000228136 VIRMAQ69YN4 1812 aaKnown RBP23.49■■□□□ 1.35
C11orf58-201ENST00000228136 TATP17735 454 aaPredicted RBP23.48■■□□□ 1.35
C11orf58-201ENST00000228136 CALD1Q05682 793 aaKnown RBP23.48■■□□□ 1.35
C11orf58-201ENST00000228136 AMOTQ4VCS5 1084 aa23.48■■□□□ 1.35
C11orf58-201ENST00000228136 USP35Q9P2H5 1018 aa23.48■■□□□ 1.35
C11orf58-201ENST00000228136 CRB1P82279 1406 aa23.47■■□□□ 1.35
C11orf58-201ENST00000228136 CARD10Q9BWT7 1032 aa23.47■■□□□ 1.35
C11orf58-201ENST00000228136 NRAPQ86VF7 1730 aa23.47■■□□□ 1.35
C11orf58-201ENST00000228136 LRRC37A3O60309 1634 aa23.47■■□□□ 1.35
C11orf58-201ENST00000228136 PARP4Q9UKK3 1724 aaKnown RBP23.46■■□□□ 1.35
C11orf58-201ENST00000228136 PKD1L3Q7Z443 1732 aa23.46■■□□□ 1.35
C11orf58-201ENST00000228136 IFT57Q9NWB7 429 aa23.45■■□□□ 1.35
C11orf58-201ENST00000228136 HTATSF1O43719 755 aaKnown RBP23.44■■□□□ 1.34
C11orf58-201ENST00000228136 LRP6O75581 1613 aa23.44■■□□□ 1.34
C11orf58-201ENST00000228136 ZNF853P0CG23 659 aa23.44■■□□□ 1.34
C11orf58-201ENST00000228136 GNAI1P63096 354 aa23.44■■□□□ 1.34
C11orf58-201ENST00000228136 IL17REQ8NFR9 667 aa23.44■■□□□ 1.34
C11orf58-201ENST00000228136 CFAP44Q96MT7 982 aa23.44■■□□□ 1.34
C11orf58-201ENST00000228136 IRX6P78412 446 aaPredicted RBP23.43■■□□□ 1.34
C11orf58-201ENST00000228136 AKAP4Q5JQC9 854 aa23.43■■□□□ 1.34
C11orf58-201ENST00000228136 MBIPQ9NS73 344 aa23.43■■□□□ 1.34
C11orf58-201ENST00000228136 NWD2Q9ULI1 1742 aa23.43■■□□□ 1.34
C11orf58-201ENST00000228136 OVOS2A0A0G2JMS6 1433 aa23.43■■□□□ 1.34
C11orf58-201ENST00000228136 EXOSC9Q06265 439 aaKnown RBP23.43■■□□□ 1.34
C11orf58-201ENST00000228136 C1orf141Q5JVX7 400 aa23.43■■□□□ 1.34
C11orf58-201ENST00000228136 SPATA31A6Q5VVP1 1343 aa23.42■■□□□ 1.34
C11orf58-201ENST00000228136 MPRIPQ6WCQ1 1025 aa23.41■■□□□ 1.34
C11orf58-201ENST00000228136 C8orf37Q96NL8 207 aa23.41■■□□□ 1.34
C11orf58-201ENST00000228136 LGR6Q9HBX8 967 aa23.41■■□□□ 1.34
C11orf58-201ENST00000228136 SPG7Q9UQ90 795 aa23.41■■□□□ 1.34
C11orf58-201ENST00000228136 SLIT2O94813 1529 aa23.41■■□□□ 1.34
C11orf58-201ENST00000228136 RNF123Q5XPI4 1314 aa23.4■■□□□ 1.34
C11orf58-201ENST00000228136 NEFLP07196 543 aa23.4■■□□□ 1.34
C11orf58-201ENST00000228136 IL2RBP14784 551 aa23.4■■□□□ 1.34
C11orf58-201ENST00000228136 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.4■■□□□ 1.341e-8■■□□□ 11.9
C11orf58-201ENST00000228136 MIS18AQ9NYP9 233 aa23.4■■□□□ 1.34
C11orf58-201ENST00000228136 FKBP8Q14318 412 aa23.39■■□□□ 1.34
C11orf58-201ENST00000228136 CEMIPQ8WUJ3 1361 aa23.39■■□□□ 1.33
C11orf58-201ENST00000228136 SHANK3Q9BYB0 1731 aa23.38■■□□□ 1.33
C11orf58-201ENST00000228136 CHL1O00533 1208 aa23.38■■□□□ 1.33
C11orf58-201ENST00000228136 PLEKHG2Q9H7P9 1386 aa23.38■■□□□ 1.33
C11orf58-201ENST00000228136 NGLY1Q96IV0 654 aa23.37■■□□□ 1.33
C11orf58-201ENST00000228136 WNK3Q9BYP7 1800 aa23.37■■□□□ 1.33
C11orf58-201ENST00000228136 CYP27B1O15528 508 aa23.37■■□□□ 1.33
C11orf58-201ENST00000228136 PHKG2P15735 406 aa23.37■■□□□ 1.33
C11orf58-201ENST00000228136 RRP1P56182 461 aaKnown RBP23.37■■□□□ 1.33
C11orf58-201ENST00000228136 SCN11AQ9UI33 1791 aa23.36■■□□□ 1.33
C11orf58-201ENST00000228136 BCAR3O75815 825 aa23.36■■□□□ 1.33
C11orf58-201ENST00000228136 ADAMTS7Q9UKP4 1686 aa23.35■■□□□ 1.33
C11orf58-201ENST00000228136 RNMTO43148 476 aaKnown RBP23.35■■□□□ 1.33
C11orf58-201ENST00000228136 ZCRB1Q8TBF4 217 aaKnown RBP23.35■■□□□ 1.33
C11orf58-201ENST00000228136 PLIN1O60240 522 aa23.35■■□□□ 1.33
C11orf58-201ENST00000228136 IFNL2Q8IZJ0 200 aa23.35■■□□□ 1.33
C11orf58-201ENST00000228136 TSPYL4Q9UJ04 414 aa23.35■■□□□ 1.33
C11orf58-201ENST00000228136 TSPYL6Q8N831 410 aa23.34■■□□□ 1.33
C11orf58-201ENST00000228136 KDM6AO15550 1401 aaPredicted RBP23.34■■□□□ 1.33
C11orf58-201ENST00000228136 ELL2O00472 640 aaPredicted RBP23.33■■□□□ 1.33
C11orf58-201ENST00000228136 BCL2L13Q9BXK5 485 aa23.33■■□□□ 1.33
C11orf58-201ENST00000228136 DISP2A7MBM2 1401 aa23.33■■□□□ 1.33
C11orf58-201ENST00000228136 RARSP54136 660 aaKnown RBP23.33■■□□□ 1.32
C11orf58-201ENST00000228136 KRT24Q2M2I5 525 aa23.33■■□□□ 1.32
C11orf58-201ENST00000228136 BCL9LQ86UU0 1499 aa23.33■■□□□ 1.32
C11orf58-201ENST00000228136 SPATA31A1Q5TZJ5 1347 aa23.33■■□□□ 1.32
C11orf58-201ENST00000228136 TAF7Q15545 349 aaPredicted RBP23.32■■□□□ 1.32
C11orf58-201ENST00000228136 C8orf58Q8NAV2 365 aa23.32■■□□□ 1.32
C11orf58-201ENST00000228136 CCDC9Q9Y3X0 531 aaKnown RBP23.32■■□□□ 1.32
C11orf58-201ENST00000228136 PCDH11XQ9BZA7 1347 aa23.32■■□□□ 1.32
C11orf58-201ENST00000228136 PCDH11YQ9BZA8 1340 aa23.32■■□□□ 1.32
C11orf58-201ENST00000228136 SIPA1L3O60292 1781 aaPredicted RBP23.32■■□□□ 1.32
C11orf58-201ENST00000228136 TEFQ10587 303 aa23.32■■□□□ 1.32
C11orf58-201ENST00000228136 UNC5CLQ8IV45 518 aa23.32■■□□□ 1.32
C11orf58-201ENST00000228136 MEX3CQ5U5Q3 659 aaKnown RBP23.31■■□□□ 1.32
C11orf58-201ENST00000228136 CT47B1P0C2W7 299 aaPredicted RBP23.3■■□□□ 1.32
C11orf58-201ENST00000228136 DDX54Q8TDD1 881 aaKnown RBP23.3■■□□□ 1.32
C11orf58-201ENST00000228136 SPATA31A5Q5VU36 1347 aa23.3■■□□□ 1.32
C11orf58-201ENST00000228136 SPATA31A7Q8IWB4 1347 aa23.3■■□□□ 1.32
C11orf58-201ENST00000228136 KDM3BQ7LBC6 1761 aa23.3■■□□□ 1.32
C11orf58-201ENST00000228136 TWISTNBQ3B726 338 aaPredicted RBP23.29■■□□□ 1.32
C11orf58-201ENST00000228136 FNBP4Q8N3X1 1017 aaPredicted RBP23.29■■□□□ 1.32
C11orf58-201ENST00000228136 VAMP4O75379 141 aa23.28■■□□□ 1.32
C11orf58-201ENST00000228136 DCAF5Q96JK2 942 aa23.27■■□□□ 1.32
C11orf58-201ENST00000228136 USP21Q9UK80 565 aa23.26■■□□□ 1.31
C11orf58-201ENST00000228136 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.26■■□□□ 1.31
C11orf58-201ENST00000228136 SSH1Q8WYL5 1049 aa23.26■■□□□ 1.31
C11orf58-201ENST00000228136 BTBD11A6QL63 1104 aa23.25■■□□□ 1.31
C11orf58-201ENST00000228136 SMC4Q9NTJ3 1288 aa23.25■■□□□ 1.31
C11orf58-201ENST00000228136 HSP90AB1P08238 724 aaKnown RBP23.25■■□□□ 1.31
C11orf58-201ENST00000228136 THRAP3Q9Y2W1 955 aaKnown RBP23.25■■□□□ 1.31
C11orf58-201ENST00000228136 KCNQ3O43525 872 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms