RNA–Protein interactions for RNA: ENST00000226218.8

VTN-201, Transcript of vitronectin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTN, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-201ENST00000226218 OTUD7AQ8TE49 926 aaPredicted RBP19.01■□□□□ 0.63
VTN-201ENST00000226218 SDSP20132 328 aa19■□□□□ 0.63
VTN-201ENST00000226218 LRSAM1Q6UWE0 723 aa19■□□□□ 0.63
VTN-201ENST00000226218 RBM27Q9P2N5 1060 aaKnown RBP19■□□□□ 0.63
VTN-201ENST00000226218 ZKSCAN5Q9Y2L8 839 aa19■□□□□ 0.63
VTN-201ENST00000226218 PRPF40AO75400 957 aaKnown RBP19■□□□□ 0.63
VTN-201ENST00000226218 SLC52A1Q9NWF4 448 aa19■□□□□ 0.63
VTN-201ENST00000226218 TMEM63CQ9P1W3 806 aa19■□□□□ 0.63
VTN-201ENST00000226218 ST18O60284 1047 aa18.99■□□□□ 0.63
VTN-201ENST00000226218 NCLP19338 710 aaKnown RBP18.99■□□□□ 0.63
VTN-201ENST00000226218 MCM5P33992 734 aa18.99■□□□□ 0.63
VTN-201ENST00000226218 DLC1Q96QB1 1528 aa18.99■□□□□ 0.63
VTN-201ENST00000226218 CEP85Q6P2H3 762 aa18.98■□□□□ 0.63
VTN-201ENST00000226218 RPAP2Q8IXW5 612 aaPredicted RBP18.98■□□□□ 0.63
VTN-201ENST00000226218 R3HCC1Q9Y3T6 440 aaKnown RBP18.98■□□□□ 0.63
VTN-201ENST00000226218 SETD1AO15047 1707 aaKnown RBP18.97■□□□□ 0.63
VTN-201ENST00000226218 AATKQ6ZMQ8 1374 aa18.97■□□□□ 0.63
VTN-201ENST00000226218 LMOD3Q0VAK6 560 aa18.97■□□□□ 0.63
VTN-201ENST00000226218 NSFL1CQ9UNZ2 370 aaKnown RBP18.97■□□□□ 0.63
VTN-201ENST00000226218 RTL1A6NKG5 1358 aa18.96■□□□□ 0.63
VTN-201ENST00000226218 XPCQ01831 940 aaPredicted RBP18.96■□□□□ 0.63
VTN-201ENST00000226218 MAP7D2Q96T17 732 aa18.96■□□□□ 0.63
VTN-201ENST00000226218 EMILIN1Q9Y6C2 1016 aa18.96■□□□□ 0.63
VTN-201ENST00000226218 RIMBP3CA6NJZ7 1639 aa18.95■□□□□ 0.62
VTN-201ENST00000226218 RIMBP3BA6NNM3 1639 aa18.95■□□□□ 0.62
VTN-201ENST00000226218 RIMBP3Q9UFD9 1639 aa18.95■□□□□ 0.62
VTN-201ENST00000226218 NRKQ7Z2Y5 1582 aa18.95■□□□□ 0.62
VTN-201ENST00000226218 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.95■□□□□ 0.62
VTN-201ENST00000226218 MON2Q7Z3U7 1717 aa18.95■□□□□ 0.62
VTN-201ENST00000226218 REC8O95072 547 aa18.94■□□□□ 0.62
VTN-201ENST00000226218 RBM10P98175 930 aaKnown RBP18.94■□□□□ 0.62
VTN-201ENST00000226218 CASC1Q6TDU7 716 aa18.94■□□□□ 0.62
VTN-201ENST00000226218 CHAMP1Q96JM3 812 aa18.94■□□□□ 0.62
VTN-201ENST00000226218 EDC4Q6P2E9 1401 aaKnown RBP18.93■□□□□ 0.62
VTN-201ENST00000226218 MSH6P52701 1360 aa18.93■□□□□ 0.62
VTN-201ENST00000226218 SYCE3A1L190 88 aa18.93■□□□□ 0.62
VTN-201ENST00000226218 CSPP1Q1MSJ5 1256 aa18.93■□□□□ 0.62
VTN-201ENST00000226218 OSBPL3Q9H4L5 887 aa18.93■□□□□ 0.62
VTN-201ENST00000226218 UQCRHLA0A096LP55 91 aa18.92■□□□□ 0.62
VTN-201ENST00000226218 FAM83GA6ND36 823 aa18.92■□□□□ 0.62
VTN-201ENST00000226218 ERC2O15083 957 aa18.92■□□□□ 0.62
VTN-201ENST00000226218 SMARCA5O60264 1052 aaPredicted RBP18.92■□□□□ 0.62
VTN-201ENST00000226218 MBD3O95983 291 aa18.92■□□□□ 0.62
VTN-201ENST00000226218 UQCRHP07919 91 aa18.92■□□□□ 0.62
VTN-201ENST00000226218 CCDC39Q9UFE4 941 aa18.92■□□□□ 0.62
VTN-201ENST00000226218 BRD1O95696 1058 aa18.91■□□□□ 0.62
VTN-201ENST00000226218 RICTORQ6R327 1708 aa18.91■□□□□ 0.62
VTN-201ENST00000226218 CUL4AQ13619 759 aa18.91■□□□□ 0.62
VTN-201ENST00000226218 DYNC1I1O14576 645 aa18.9■□□□□ 0.62
VTN-201ENST00000226218 NEO1Q92859 1461 aa18.9■□□□□ 0.62
VTN-201ENST00000226218 C3P01024 1663 aa18.9■□□□□ 0.62
VTN-201ENST00000226218 AKAP12Q02952 1782 aa18.89■□□□□ 0.62
VTN-201ENST00000226218 KIAA0232Q92628 1395 aa18.89■□□□□ 0.62
VTN-201ENST00000226218 TMX3Q96JJ7 454 aa18.89■□□□□ 0.62
VTN-201ENST00000226218 SENP3Q9H4L4 574 aaPredicted RBP18.89■□□□□ 0.62
VTN-201ENST00000226218 DCTN1Q14203 1278 aa18.89■□□□□ 0.61
VTN-201ENST00000226218 MEIS3Q99687 375 aa18.88■□□□□ 0.61
VTN-201ENST00000226218 FAM13BQ9NYF5 915 aa18.88■□□□□ 0.61
VTN-201ENST00000226218 CPS1P31327 1500 aa18.88■□□□□ 0.61
VTN-201ENST00000226218 PTPRCP08575 1304 aa18.88■□□□□ 0.61
VTN-201ENST00000226218 SASS6Q6UVJ0 657 aa18.88■□□□□ 0.61
VTN-201ENST00000226218 IL17RAQ96F46 866 aa18.88■□□□□ 0.61
VTN-201ENST00000226218 SALL3Q9BXA9 1300 aa18.87■□□□□ 0.61
VTN-201ENST00000226218 MCM2P49736 904 aa18.87■□□□□ 0.61
VTN-201ENST00000226218 NME9Q86XW9 330 aa18.86■□□□□ 0.61
VTN-201ENST00000226218 PRDM4Q9UKN5 801 aa18.86■□□□□ 0.61
VTN-201ENST00000226218 PDE1AP54750 535 aa18.86■□□□□ 0.61
VTN-201ENST00000226218 KRT24Q2M2I5 525 aa18.86■□□□□ 0.61
VTN-201ENST00000226218 MTERF4Q7Z6M4 381 aaKnown RBP18.86■□□□□ 0.61
VTN-201ENST00000226218 CHL1O00533 1208 aa18.85■□□□□ 0.61
VTN-201ENST00000226218 HAP1P54257 671 aaPredicted RBP18.85■□□□□ 0.61
VTN-201ENST00000226218 INTS4Q96HW7 963 aaKnown RBP18.85■□□□□ 0.61
VTN-201ENST00000226218 ZRANB1Q9UGI0 708 aa18.85■□□□□ 0.61
VTN-201ENST00000226218 RGPD1P0DJD0 1748 aa18.84■□□□□ 0.61
VTN-201ENST00000226218 NEK4P51957 841 aa18.84■□□□□ 0.61
VTN-201ENST00000226218 TSPY26PQ9H489 355 aa18.84■□□□□ 0.61
VTN-201ENST00000226218 TCHHQ07283 1943 aa18.84■□□□□ 0.61
VTN-201ENST00000226218 ITSN1Q15811 1721 aa18.83■□□□□ 0.61
VTN-201ENST00000226218 RAPGEF3O95398 923 aa18.83■□□□□ 0.6
VTN-201ENST00000226218 RNF214Q8ND24 703 aa18.83■□□□□ 0.6
VTN-201ENST00000226218 APBB1O00213 710 aa18.82■□□□□ 0.6
VTN-201ENST00000226218 ANAPC15P60006 121 aa18.82■□□□□ 0.6
VTN-201ENST00000226218 WAPLQ7Z5K2 1190 aa18.82■□□□□ 0.6
VTN-201ENST00000226218 ESYT1Q9BSJ8 1104 aa18.82■□□□□ 0.6
VTN-201ENST00000226218 SSH2Q76I76 1423 aa18.82■□□□□ 0.6
VTN-201ENST00000226218 FOXD4L5Q5VV16 416 aaPredicted RBP18.82■□□□□ 0.6
VTN-201ENST00000226218 OSCARQ8IYS5 282 aa18.82■□□□□ 0.6
VTN-201ENST00000226218 FOXD4L4Q8WXT5 416 aaPredicted RBP18.82■□□□□ 0.6
VTN-201ENST00000226218 PALD1Q9ULE6 856 aa18.82■□□□□ 0.6
VTN-201ENST00000226218 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.82■□□□□ 0.6
VTN-201ENST00000226218 HMMRO75330 724 aa18.81■□□□□ 0.6
VTN-201ENST00000226218 N4BP2Q86UW6 1770 aaPredicted RBP18.81■□□□□ 0.6
VTN-201ENST00000226218 RRS1Q15050 365 aaKnown RBP18.8■□□□□ 0.6
VTN-201ENST00000226218 CRB1P82279 1406 aa18.8■□□□□ 0.6
VTN-201ENST00000226218 NRXN3Q9Y4C0 1643 aa18.8■□□□□ 0.6
VTN-201ENST00000226218 KIAA2012Q0VF49 1180 aa18.79■□□□□ 0.6
VTN-201ENST00000226218 SYAP1Q96A49 352 aaPredicted RBP18.79■□□□□ 0.6
VTN-201ENST00000226218 AEBP1Q8IUX7 1158 aa18.79■□□□□ 0.6
VTN-201ENST00000226218 UVSSAQ2YD98 709 aa18.78■□□□□ 0.6
VTN-201ENST00000226218 SMAP1Q8IYB5 467 aaPredicted RBP18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms