RNA–Protein interactions for RNA: ENST00000222990.7

SNX8-201, Transcript of sorting nexin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX8, Length 4,727 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX8-201ENST00000222990 NPC1L1Q9UHC9 1359 aa23.61■■□□□ 1.37
SNX8-201ENST00000222990 GCC2Q8IWJ2 1684 aa23.6■■□□□ 1.37
SNX8-201ENST00000222990 MYL6BP14649 208 aa23.6■■□□□ 1.37
SNX8-201ENST00000222990 ZSCAN31Q96LW9 406 aaPredicted RBP23.6■■□□□ 1.37
SNX8-201ENST00000222990 TRIM5Q9C035 493 aa23.6■■□□□ 1.37
SNX8-201ENST00000222990 TTC21BQ7Z4L5 1316 aa23.6■■□□□ 1.37
SNX8-201ENST00000222990 ZNF518AQ6AHZ1 1483 aa23.6■■□□□ 1.37
SNX8-201ENST00000222990 TNPO1Q92973 898 aaKnown RBP23.6■■□□□ 1.37
SNX8-201ENST00000222990 JAKMIP1Q96N16 626 aaKnown RBP23.6■■□□□ 1.37
SNX8-201ENST00000222990 UPF3BQ9BZI7 483 aaKnown RBP23.6■■□□□ 1.37
SNX8-201ENST00000222990 NAT10Q9H0A0 1025 aaKnown RBP23.6■■□□□ 1.37
SNX8-201ENST00000222990 KRT85P78386 507 aa23.6■■□□□ 1.37
SNX8-201ENST00000222990 LARP1BQ659C4 914 aaKnown RBP23.6■■□□□ 1.37
SNX8-201ENST00000222990 KINO60870 393 aaKnown RBP23.59■■□□□ 1.37
SNX8-201ENST00000222990 TSR1Q2NL82 804 aaKnown RBP23.59■■□□□ 1.37
SNX8-201ENST00000222990 WDR7Q9Y4E6 1490 aa23.59■■□□□ 1.37
SNX8-201ENST00000222990 GLRX3O76003 335 aaKnown RBP23.59■■□□□ 1.37
SNX8-201ENST00000222990 RLBP1P12271 317 aa23.59■■□□□ 1.37
SNX8-201ENST00000222990 PDRG1Q9NUG6 133 aa23.59■■□□□ 1.37
SNX8-201ENST00000222990 AMOTL2Q9Y2J4 779 aa23.59■■□□□ 1.37
SNX8-201ENST00000222990 SPINK5Q9NQ38 1064 aaPredicted RBP23.59■■□□□ 1.37
SNX8-201ENST00000222990 CABP4P57796 275 aa23.58■■□□□ 1.37
SNX8-201ENST00000222990 HOMER1Q86YM7 354 aa23.58■■□□□ 1.37
SNX8-201ENST00000222990 MARCH6O60337 910 aa23.58■■□□□ 1.36
SNX8-201ENST00000222990 TNNQ9UQP3 1299 aa23.58■■□□□ 1.36
SNX8-201ENST00000222990 PBRM1Q86U86 1689 aa23.58■■□□□ 1.36
SNX8-201ENST00000222990 TPM2P07951 284 aa23.57■■□□□ 1.36
SNX8-201ENST00000222990 FLIIQ13045 1269 aa23.57■■□□□ 1.36
SNX8-201ENST00000222990 SSFA2P28290 1259 aa23.57■■□□□ 1.36
SNX8-201ENST00000222990 G3V3G9 751 aa23.56■■□□□ 1.36
SNX8-201ENST00000222990 CCDC192P0DO97 292 aa23.56■■□□□ 1.36
SNX8-201ENST00000222990 STK3Q13188 491 aa23.56■■□□□ 1.36
SNX8-201ENST00000222990 DCAF8Q5TAQ9 597 aa23.56■■□□□ 1.36
SNX8-201ENST00000222990 DHX16O60231 1041 aaKnown RBP23.56■■□□□ 1.36
SNX8-201ENST00000222990 TBC1D2BQ9UPU7 963 aa23.56■■□□□ 1.36
SNX8-201ENST00000222990 CCAR2Q8N163 923 aaKnown RBP23.55■■□□□ 1.36
SNX8-201ENST00000222990 LRRFIP2Q9Y608 721 aaKnown RBP23.55■■□□□ 1.36
SNX8-201ENST00000222990 CCDC158Q5M9N0 1113 aa23.55■■□□□ 1.36
SNX8-201ENST00000222990 AMOTL1Q8IY63 956 aa23.55■■□□□ 1.36
SNX8-201ENST00000222990 ZNF396Q96N95 335 aaPredicted RBP23.54■■□□□ 1.36
SNX8-201ENST00000222990 INSRP06213 1382 aa23.54■■□□□ 1.36
SNX8-201ENST00000222990 NOL10Q9BSC4 688 aaKnown RBP23.54■■□□□ 1.36
SNX8-201ENST00000222990 ACEP12821 1306 aa23.54■■□□□ 1.36
SNX8-201ENST00000222990 XPCQ01831 940 aaPredicted RBP23.53■■□□□ 1.36
SNX8-201ENST00000222990 POLKQ9UBT6 870 aa23.53■■□□□ 1.36
SNX8-201ENST00000222990 GOLGA6L1Q8N7Z2 621 aa23.53■■□□□ 1.36
SNX8-201ENST00000222990 ANKRD20A12PQ8NF67 263 aa23.53■■□□□ 1.36
SNX8-201ENST00000222990 ABCC10Q5T3U5 1492 aa23.53■■□□□ 1.36
SNX8-201ENST00000222990 TTC22Q5TAA0 569 aa23.53■■□□□ 1.36
SNX8-201ENST00000222990 PDIA4P13667 645 aaKnown RBP23.52■■□□□ 1.36
SNX8-201ENST00000222990 CASTP20810 708 aaKnown RBP23.52■■□□□ 1.36
SNX8-201ENST00000222990 KIF6Q6ZMV9 814 aa23.52■■□□□ 1.36
SNX8-201ENST00000222990 USHBP1Q8N6Y0 703 aa23.52■■□□□ 1.36
SNX8-201ENST00000222990 CLSTN1O94985 981 aa23.52■■□□□ 1.36
SNX8-201ENST00000222990 CEBPZQ03701 1054 aaKnown RBP23.52■■□□□ 1.36
SNX8-201ENST00000222990 KRT32Q14532 448 aa23.52■■□□□ 1.36
SNX8-201ENST00000222990 MAP7D2Q96T17 732 aa23.52■■□□□ 1.36
SNX8-201ENST00000222990 DNAAF4Q8WXU2 420 aa23.52■■□□□ 1.36
SNX8-201ENST00000222990 MRPL50Q8N5N7 158 aaKnown RBP23.51■■□□□ 1.35
SNX8-201ENST00000222990 TNMDQ9H2S6 317 aa23.51■■□□□ 1.35
SNX8-201ENST00000222990 PHF8Q9UPP1 1060 aa23.51■■□□□ 1.35
SNX8-201ENST00000222990 SYCE3A1L190 88 aa23.51■■□□□ 1.35
SNX8-201ENST00000222990 ZC3H6P61129 1189 aaKnown RBP23.51■■□□□ 1.35
SNX8-201ENST00000222990 HMGN5P82970 282 aaKnown RBP23.51■■□□□ 1.35
SNX8-201ENST00000222990 AMOTQ4VCS5 1084 aa23.51■■□□□ 1.35
SNX8-201ENST00000222990 MTERF4Q7Z6M4 381 aaKnown RBP23.51■■□□□ 1.35
SNX8-201ENST00000222990 STK38Q15208 465 aa23.5■■□□□ 1.35
SNX8-201ENST00000222990 TTC39AQ5SRH9 613 aa23.5■■□□□ 1.35
SNX8-201ENST00000222990 RBM42Q9BTD8 480 aaKnown RBP23.5■■□□□ 1.35
SNX8-201ENST00000222990 ZMYM4Q5VZL5 1548 aa23.5■■□□□ 1.35
SNX8-201ENST00000222990 ABCC2Q92887 1545 aa23.49■■□□□ 1.35
SNX8-201ENST00000222990 SART3Q15020 963 aaKnown RBP23.49■■□□□ 1.35
SNX8-201ENST00000222990 ANO8Q9HCE9 1232 aaPredicted RBP23.49■■□□□ 1.35
SNX8-201ENST00000222990 OLFM4Q6UX06 510 aa23.49■■□□□ 1.35
SNX8-201ENST00000222990 TOM1L2Q6ZVM7 507 aa23.49■■□□□ 1.35
SNX8-201ENST00000222990 C8orf58Q8NAV2 365 aa23.49■■□□□ 1.35
SNX8-201ENST00000222990 HSP90AB2PQ58FF8 381 aa23.48■■□□□ 1.35
SNX8-201ENST00000222990 LARP1Q6PKG0 1096 aaKnown RBP23.48■■□□□ 1.35
SNX8-201ENST00000222990 ZSCAN30Q86W11 494 aa23.48■■□□□ 1.35
SNX8-201ENST00000222990 SMC5Q8IY18 1101 aa23.48■■□□□ 1.35
SNX8-201ENST00000222990 MAST1Q9Y2H9 1570 aa23.48■■□□□ 1.35
SNX8-201ENST00000222990 SPC24Q8NBT2 197 aa23.47■■□□□ 1.35
SNX8-201ENST00000222990 STRN4Q9NRL3 753 aa23.47■■□□□ 1.35
SNX8-201ENST00000222990 CCDC47Q96A33 483 aaKnown RBP23.47■■□□□ 1.35
SNX8-201ENST00000222990 CNNM1Q9NRU3 951 aa23.47■■□□□ 1.35
SNX8-201ENST00000222990 DBF4Q9UBU7 674 aaPredicted RBP23.47■■□□□ 1.35
SNX8-201ENST00000222990 PRPF40BQ6NWY9 871 aaKnown RBP23.47■■□□□ 1.35
SNX8-201ENST00000222990 MPNDQ8N594 471 aa23.47■■□□□ 1.35
SNX8-201ENST00000222990 ANKRD44Q8N8A2 993 aa23.47■■□□□ 1.35
SNX8-201ENST00000222990 SPATA32Q96LK8 384 aa23.47■■□□□ 1.35
SNX8-201ENST00000222990 CEP126Q9P2H0 1117 aa23.47■■□□□ 1.35
SNX8-201ENST00000222990 CCDC57Q2TAC2 916 aa23.47■■□□□ 1.35
SNX8-201ENST00000222990 MEIS3Q99687 375 aa23.47■■□□□ 1.35
SNX8-201ENST00000222990 ZBTB40Q9NUA8 1239 aa23.47■■□□□ 1.35
SNX8-201ENST00000222990 A0A1W2PP64 1363 aa23.47■■□□□ 1.35
SNX8-201ENST00000222990 BLMP54132 1417 aaPredicted RBP23.47■■□□□ 1.35
SNX8-201ENST00000222990 VAMP4O75379 141 aa23.46■■□□□ 1.35
SNX8-201ENST00000222990 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.46■■□□□ 1.35
SNX8-201ENST00000222990 IPO7O95373 1038 aaKnown RBP23.46■■□□□ 1.35
SNX8-201ENST00000222990 XBP1P17861 261 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms