RNA–Protein interactions for RNA: ENST00000221504.12

TRMT1-201, Transcript of tRNA methyltransferase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRMT1, Length 2,179 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT1-201ENST00000221504 FRAT2O75474 233 aaPredicted RBP18.71■□□□□ 0.59
TRMT1-201ENST00000221504 ANKRD45Q5TZF3 282 aa18.71■□□□□ 0.59
TRMT1-201ENST00000221504 RGS12O14924 1447 aa18.7■□□□□ 0.58
TRMT1-201ENST00000221504 BMP2KLQ5H9B9 411 aa18.69■□□□□ 0.58
TRMT1-201ENST00000221504 INTS3Q68E01 1043 aaKnown RBP18.69■□□□□ 0.58
TRMT1-201ENST00000221504 IGSF1Q8N6C5 1336 aa18.68■□□□□ 0.58
TRMT1-201ENST00000221504 AMPHP49418 695 aa18.68■□□□□ 0.58
TRMT1-201ENST00000221504 SLKQ9H2G2 1235 aaPredicted RBP18.68■□□□□ 0.58
TRMT1-201ENST00000221504 ANTXR1Q9H6X2 564 aa18.68■□□□□ 0.58
TRMT1-201ENST00000221504 CEP170BQ9Y4F5 1589 aaPredicted RBP18.68■□□□□ 0.58
TRMT1-201ENST00000221504 KCNA6P17658 529 aa18.68■□□□□ 0.58
TRMT1-201ENST00000221504 MTHFSDQ2M296 383 aaKnown RBP18.67■□□□□ 0.58
TRMT1-201ENST00000221504 MARF1Q9Y4F3 1742 aaKnown RBP18.67■□□□□ 0.58
TRMT1-201ENST00000221504 GSE1Q14687 1217 aa18.66■□□□□ 0.58
TRMT1-201ENST00000221504 USP54Q70EL1 1684 aa18.66■□□□□ 0.58
TRMT1-201ENST00000221504 PTPRCP08575 1304 aa18.66■□□□□ 0.58
TRMT1-201ENST00000221504 FOXO3O43524 673 aa18.66■□□□□ 0.58
TRMT1-201ENST00000221504 EYA1Q99502 592 aa18.66■□□□□ 0.58
TRMT1-201ENST00000221504 NLRP6P59044 892 aa18.65■□□□□ 0.58
TRMT1-201ENST00000221504 RTF1Q92541 710 aaKnown RBP18.65■□□□□ 0.58
TRMT1-201ENST00000221504 ILDR1Q86SU0 546 aaPredicted RBP18.64■□□□□ 0.57
TRMT1-201ENST00000221504 GAS2L2Q8NHY3 880 aa18.64■□□□□ 0.57
TRMT1-201ENST00000221504 ATP10DQ9P241 1426 aa18.64■□□□□ 0.57
TRMT1-201ENST00000221504 RBM25P49756 843 aaKnown RBP18.63■□□□□ 0.57
TRMT1-201ENST00000221504 TSPYL4Q9UJ04 414 aa18.63■□□□□ 0.57
TRMT1-201ENST00000221504 MSH6P52701 1360 aa18.62■□□□□ 0.57
TRMT1-201ENST00000221504 LRRC37A3O60309 1634 aa18.62■□□□□ 0.57
TRMT1-201ENST00000221504 DCTPP1Q9H773 170 aa18.62■□□□□ 0.57
TRMT1-201ENST00000221504 MIS18AQ9NYP9 233 aa18.62■□□□□ 0.57
TRMT1-201ENST00000221504 HOXC9P31274 260 aa18.61■□□□□ 0.57
TRMT1-201ENST00000221504 ANKRD44Q8N8A2 993 aa18.61■□□□□ 0.57
TRMT1-201ENST00000221504 NWD1Q149M9 1564 aa18.6■□□□□ 0.57
TRMT1-201ENST00000221504 HTATSF1O43719 755 aaKnown RBP18.6■□□□□ 0.57
TRMT1-201ENST00000221504 SLC4A2P04920 1241 aa18.6■□□□□ 0.57
TRMT1-201ENST00000221504 RTL1A6NKG5 1358 aa18.6■□□□□ 0.57
TRMT1-201ENST00000221504 NUTM2GQ5VZR2 741 aa18.59■□□□□ 0.57
TRMT1-201ENST00000221504 RPAP2Q8IXW5 612 aaPredicted RBP18.59■□□□□ 0.57
TRMT1-201ENST00000221504 CHD2O14647 1828 aaKnown RBP18.59■□□□□ 0.57
TRMT1-201ENST00000221504 CEP85Q6P2H3 762 aa18.59■□□□□ 0.57
TRMT1-201ENST00000221504 ABTB2Q8N961 1025 aa18.58■□□□□ 0.57
TRMT1-201ENST00000221504 TBC1D9Q6ZT07 1266 aa18.58■□□□□ 0.56
TRMT1-201ENST00000221504 HSCBQ8IWL3 235 aa18.57■□□□□ 0.56
TRMT1-201ENST00000221504 MEIS3Q99687 375 aa18.57■□□□□ 0.56
TRMT1-201ENST00000221504 PLEKHM2Q8IWE5 1019 aa18.57■□□□□ 0.56
TRMT1-201ENST00000221504 GNAT3A8MTJ3 354 aa18.56■□□□□ 0.56
TRMT1-201ENST00000221504 G2E3Q7L622 706 aa18.55■□□□□ 0.56
TRMT1-201ENST00000221504 SPRYD3Q8NCJ5 442 aa18.55■□□□□ 0.56
TRMT1-201ENST00000221504 ZNF142P52746 1687 aaPredicted RBP18.55■□□□□ 0.56
TRMT1-201ENST00000221504 CDC45O75419 566 aa18.55■□□□□ 0.56
TRMT1-201ENST00000221504 GSPT1P15170 499 aaKnown RBP18.55■□□□□ 0.56
TRMT1-201ENST00000221504 SNX21Q969T3 373 aa18.55■□□□□ 0.56
TRMT1-201ENST00000221504 PHF8Q9UPP1 1060 aa18.55■□□□□ 0.56
TRMT1-201ENST00000221504 FAM208AQ9UK61 1670 aaKnown RBP18.54■□□□□ 0.56
TRMT1-201ENST00000221504 ANKLE2Q86XL3 938 aa18.54■□□□□ 0.56
TRMT1-201ENST00000221504 MAP3K5Q99683 1374 aa18.54■□□□□ 0.56
TRMT1-201ENST00000221504 LTN1O94822 1766 aa18.54■□□□□ 0.56
TRMT1-201ENST00000221504 CCT4P50991 539 aaKnown RBP18.54■□□□□ 0.56
TRMT1-201ENST00000221504 NCOA3Q9Y6Q9 1424 aa18.53■□□□□ 0.56
TRMT1-201ENST00000221504 STK31Q9BXU1 1019 aa18.53■□□□□ 0.56
TRMT1-201ENST00000221504 CHMP5Q9NZZ3 219 aa18.53■□□□□ 0.56
TRMT1-201ENST00000221504 TTC22Q5TAA0 569 aa18.52■□□□□ 0.56
TRMT1-201ENST00000221504 F6X3S4 739 aa18.52■□□□□ 0.56
TRMT1-201ENST00000221504 C14orf37Q86TY3 774 aa18.52■□□□□ 0.56
TRMT1-201ENST00000221504 LTV1Q96GA3 475 aaPredicted RBP18.52■□□□□ 0.56
TRMT1-201ENST00000221504 KIF2CQ99661 725 aa18.52■□□□□ 0.56
TRMT1-201ENST00000221504 SLC4A10Q6U841 1118 aa18.51■□□□□ 0.55
TRMT1-201ENST00000221504 C16orf71Q8IYS4 520 aaPredicted RBP18.51■□□□□ 0.55
TRMT1-201ENST00000221504 IL17REQ8NFR9 667 aa18.51■□□□□ 0.55
TRMT1-201ENST00000221504 NFAT5O94916 1531 aa18.51■□□□□ 0.55
TRMT1-201ENST00000221504 CACNA1FO60840 1977 aa18.51■□□□□ 0.55
TRMT1-201ENST00000221504 SOS1Q07889 1333 aaPredicted RBP18.5■□□□□ 0.55
TRMT1-201ENST00000221504 HMMRO75330 724 aa18.5■□□□□ 0.55
TRMT1-201ENST00000221504 CCDC30Q5VVM6 783 aa18.5■□□□□ 0.55
TRMT1-201ENST00000221504 BABAM1Q9NWV8 329 aa18.5■□□□□ 0.55
TRMT1-201ENST00000221504 ADGRL3Q9HAR2 1447 aa18.5■□□□□ 0.55
TRMT1-201ENST00000221504 EIF5BO60841 1220 aaKnown RBP18.49■□□□□ 0.55
TRMT1-201ENST00000221504 FLIIQ13045 1269 aa18.49■□□□□ 0.55
TRMT1-201ENST00000221504 TAF7Q15545 349 aaPredicted RBP18.48■□□□□ 0.55
TRMT1-201ENST00000221504 OTUD7AQ8TE49 926 aaPredicted RBP18.48■□□□□ 0.55
TRMT1-201ENST00000221504 IP6K1Q92551 441 aa18.48■□□□□ 0.55
TRMT1-201ENST00000221504 USHBP1Q8N6Y0 703 aa18.48■□□□□ 0.55
TRMT1-201ENST00000221504 SMARCA5O60264 1052 aaPredicted RBP18.47■□□□□ 0.55
TRMT1-201ENST00000221504 RBM33Q96EV2 1170 aaKnown RBP18.47■□□□□ 0.55
TRMT1-201ENST00000221504 DDIT3P35638 169 aa18.47■□□□□ 0.55
TRMT1-201ENST00000221504 N4BP2Q86UW6 1770 aaPredicted RBP18.46■□□□□ 0.55
TRMT1-201ENST00000221504 APBB1O00213 710 aa18.46■□□□□ 0.55
TRMT1-201ENST00000221504 GNAI2P04899 355 aa18.46■□□□□ 0.55
TRMT1-201ENST00000221504 FKBP5Q13451 457 aaPredicted RBP18.46■□□□□ 0.55
TRMT1-201ENST00000221504 MCM4P33991 863 aa18.45■□□□□ 0.54
TRMT1-201ENST00000221504 PHRF1Q9P1Y6 1649 aaKnown RBP18.45■□□□□ 0.54
TRMT1-201ENST00000221504 HSP90AB1P08238 724 aaKnown RBP18.45■□□□□ 0.54
TRMT1-201ENST00000221504 ESCO1Q5FWF5 840 aa18.45■□□□□ 0.54
TRMT1-201ENST00000221504 CEMIPQ8WUJ3 1361 aa18.44■□□□□ 0.54
TRMT1-201ENST00000221504 PSME1Q06323 249 aa18.44■□□□□ 0.54
TRMT1-201ENST00000221504 NECTIN2Q92692 538 aa18.44■□□□□ 0.54
TRMT1-201ENST00000221504 PXDNLA1KZ92 1463 aa18.44■□□□□ 0.54
TRMT1-201ENST00000221504 SDSP20132 328 aa18.44■□□□□ 0.54
TRMT1-201ENST00000221504 SETD1BQ9UPS6 1966 aaKnown RBP18.43■□□□□ 0.54
TRMT1-201ENST00000221504 MED1Q15648 1581 aaPredicted RBP18.43■□□□□ 0.54
TRMT1-201ENST00000221504 GNAI3P08754 354 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms