RNA–Protein interactions for RNA: ENST00000220562.8

EXTL3-201, Transcript of exostosin like glycosyltransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXTL3, Length 6,483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-201ENST00000220562 TSPYL1Q9H0U9 437 aa21.05■□□□□ 0.96
EXTL3-201ENST00000220562 CCDC112Q8NEF3 446 aa21.05■□□□□ 0.96
EXTL3-201ENST00000220562 RAI14Q9P0K7 980 aa21.05■□□□□ 0.96
EXTL3-201ENST00000220562 CCDC66A2RUB6 948 aa21.05■□□□□ 0.96
EXTL3-201ENST00000220562 NUP62CLQ9H1M0 184 aa21.05■□□□□ 0.96
EXTL3-201ENST00000220562 LUC7LQ9NQ29 371 aaKnown RBP21.05■□□□□ 0.96
EXTL3-201ENST00000220562 CASTP20810 708 aaKnown RBP21.04■□□□□ 0.96
EXTL3-201ENST00000220562 PIBF1Q8WXW3 757 aa21.04■□□□□ 0.96
EXTL3-201ENST00000220562 CTNNA3Q9UI47 895 aa21.04■□□□□ 0.96
EXTL3-201ENST00000220562 CFAP45Q9UL16 551 aa21.04■□□□□ 0.96
EXTL3-201ENST00000220562 GOLGA6L10A6NI86 522 aa21.04■□□□□ 0.96
EXTL3-201ENST00000220562 FCHSD2O94868 740 aa21.04■□□□□ 0.96
EXTL3-201ENST00000220562 MIS18AQ9NYP9 233 aa21.04■□□□□ 0.96
EXTL3-201ENST00000220562 NFE2L2Q16236 605 aa21.03■□□□□ 0.96
EXTL3-201ENST00000220562 IL27Q8NEV9 243 aa21.03■□□□□ 0.96
EXTL3-201ENST00000220562 NEFHP12036 1026 aa21.03■□□□□ 0.96
EXTL3-201ENST00000220562 WDR97A6NE52 1622 aa21.03■□□□□ 0.96
EXTL3-201ENST00000220562 CCDC85AQ96PX6 553 aaPredicted RBP21.03■□□□□ 0.96
EXTL3-201ENST00000220562 GNAT3A8MTJ3 354 aa21.03■□□□□ 0.96
EXTL3-201ENST00000220562 ATAD2Q6PL18 1390 aa21.03■□□□□ 0.96
EXTL3-201ENST00000220562 XPCQ01831 940 aaPredicted RBP21.03■□□□□ 0.96
EXTL3-201ENST00000220562 PAF1Q8N7H5 531 aa21.03■□□□□ 0.96
EXTL3-201ENST00000220562 CEP126Q9P2H0 1117 aa21.02■□□□□ 0.96
EXTL3-201ENST00000220562 SEPT11Q9NVA2 429 aaKnown RBP21.02■□□□□ 0.96
EXTL3-201ENST00000220562 PPP6R1Q9UPN7 881 aa21.02■□□□□ 0.96
EXTL3-201ENST00000220562 SLFN5Q08AF3 891 aa21.02■□□□□ 0.96
EXTL3-201ENST00000220562 SSBP05455 408 aaKnown RBP eCLIP21.02■□□□□ 0.95
EXTL3-201ENST00000220562 KRT32Q14532 448 aa21.02■□□□□ 0.95
EXTL3-201ENST00000220562 TXLNBQ8N3L3 684 aa21.02■□□□□ 0.95
EXTL3-201ENST00000220562 TIAM1Q13009 1591 aa21.02■□□□□ 0.95
EXTL3-201ENST00000220562 CALRP27797 417 aaKnown RBP21.01■□□□□ 0.95
EXTL3-201ENST00000220562 CEP57L1Q8IYX8 460 aa21.01■□□□□ 0.95
EXTL3-201ENST00000220562 SLC52A1Q9NWF4 448 aa21.01■□□□□ 0.95
EXTL3-201ENST00000220562 TMPOP42166 694 aaKnown RBP21.01■□□□□ 0.95
EXTL3-201ENST00000220562 RPAP2Q8IXW5 612 aaPredicted RBP21.01■□□□□ 0.95
EXTL3-201ENST00000220562 BICDL1Q6ZP65 573 aa21.01■□□□□ 0.95
EXTL3-201ENST00000220562 DDX11Q96FC9 970 aa21.01■□□□□ 0.95
EXTL3-201ENST00000220562 SLC26A8Q96RN1 970 aa21.01■□□□□ 0.95
EXTL3-201ENST00000220562 UQCRHLA0A096LP55 91 aa21.01■□□□□ 0.95
EXTL3-201ENST00000220562 UQCRHP07919 91 aa21.01■□□□□ 0.95
EXTL3-201ENST00000220562 LRP2BPQ9P2M1 347 aa21.01■□□□□ 0.95
EXTL3-201ENST00000220562 UPF3BQ9BZI7 483 aaKnown RBP21■□□□□ 0.95
EXTL3-201ENST00000220562 IMMTQ16891 758 aaKnown RBP21■□□□□ 0.95
EXTL3-201ENST00000220562 RPGRIP1LQ68CZ1 1315 aa21■□□□□ 0.95
EXTL3-201ENST00000220562 IDH1O75874 414 aaKnown RBP20.99■□□□□ 0.95
EXTL3-201ENST00000220562 TROQ12816 1431 aaPredicted RBP20.99■□□□□ 0.95
EXTL3-201ENST00000220562 SMARCA5O60264 1052 aaPredicted RBP20.99■□□□□ 0.95
EXTL3-201ENST00000220562 ZSCAN29Q8IWY8 852 aaPredicted RBP20.99■□□□□ 0.95
EXTL3-201ENST00000220562 EXOC6BQ9Y2D4 811 aa20.99■□□□□ 0.95
EXTL3-201ENST00000220562 CAMK4Q16566 473 aa20.99■□□□□ 0.95
EXTL3-201ENST00000220562 WASF1Q92558 559 aa20.99■□□□□ 0.95
EXTL3-201ENST00000220562 SEPT7Q16181 437 aaKnown RBP20.99■□□□□ 0.95
EXTL3-201ENST00000220562 MCM4P33991 863 aa20.98■□□□□ 0.95
EXTL3-201ENST00000220562 FAM193AP78312 1265 aa20.98■□□□□ 0.95
EXTL3-201ENST00000220562 NCAPD3P42695 1498 aa20.98■□□□□ 0.95
EXTL3-201ENST00000220562 IGHMBP2P38935 993 aaKnown RBP20.98■□□□□ 0.95
EXTL3-201ENST00000220562 MCM10Q7L590 875 aa20.98■□□□□ 0.95
EXTL3-201ENST00000220562 AIDAQ96BJ3 306 aa20.98■□□□□ 0.95
EXTL3-201ENST00000220562 CIZ1Q9ULV3 898 aaPredicted RBP20.98■□□□□ 0.95
EXTL3-201ENST00000220562 SMTNL1A8MU46 457 aa20.98■□□□□ 0.95
EXTL3-201ENST00000220562 ANKRD62A6NC57 917 aa20.98■□□□□ 0.95
EXTL3-201ENST00000220562 ERLIN1O75477 346 aa20.97■□□□□ 0.95
EXTL3-201ENST00000220562 CENPHQ9H3R5 247 aa20.97■□□□□ 0.95
EXTL3-201ENST00000220562 ZNF76P36508 570 aa20.97■□□□□ 0.95
EXTL3-201ENST00000220562 BMP2KQ9NSY1 1161 aaPredicted RBP20.97■□□□□ 0.95
EXTL3-201ENST00000220562 PRDM11Q9NQV5 511 aa20.97■□□□□ 0.95
EXTL3-201ENST00000220562 DUSP27Q5VZP5 1158 aa20.97■□□□□ 0.95
EXTL3-201ENST00000220562 USP5P45974 858 aa20.96■□□□□ 0.95
EXTL3-201ENST00000220562 CCDC83Q8IWF9 413 aa20.96■□□□□ 0.95
EXTL3-201ENST00000220562 THUMPD2Q9BTF0 503 aaKnown RBP20.96■□□□□ 0.95
EXTL3-201ENST00000220562 NUDT16Q96DE0 195 aaKnown RBP20.96■□□□□ 0.95
EXTL3-201ENST00000220562 ENOX2Q16206 610 aaKnown RBP20.96■□□□□ 0.95
EXTL3-201ENST00000220562 MRC2Q9UBG0 1479 aa20.96■□□□□ 0.95
EXTL3-201ENST00000220562 SYCE3A1L190 88 aa20.96■□□□□ 0.95
EXTL3-201ENST00000220562 MATR3P43243 847 aaKnown RBP eCLIP20.96■□□□□ 0.95
EXTL3-201ENST00000220562 ANKLE2Q86XL3 938 aa20.95■□□□□ 0.94
EXTL3-201ENST00000220562 FILIP1Q7Z7B0 1213 aa20.95■□□□□ 0.94
EXTL3-201ENST00000220562 MX1P20591 662 aa20.95■□□□□ 0.94
EXTL3-201ENST00000220562 CEP131Q9UPN4 1083 aa20.95■□□□□ 0.94
EXTL3-201ENST00000220562 MAP3K11Q16584 847 aa20.94■□□□□ 0.94
EXTL3-201ENST00000220562 METTL24Q5JXM2 366 aa20.94■□□□□ 0.94
EXTL3-201ENST00000220562 PRPF40BQ6NWY9 871 aaKnown RBP20.94■□□□□ 0.94
EXTL3-201ENST00000220562 RAPGEF3O95398 923 aa20.94■□□□□ 0.94
EXTL3-201ENST00000220562 EIF3JO75822 258 aaKnown RBP20.94■□□□□ 0.94
EXTL3-201ENST00000220562 ZC3H6P61129 1189 aaKnown RBP20.94■□□□□ 0.94
EXTL3-201ENST00000220562 SNAPC4Q5SXM2 1469 aa20.94■□□□□ 0.94
EXTL3-201ENST00000220562 MPHOSPH10O00566 681 aaKnown RBP20.93■□□□□ 0.94
EXTL3-201ENST00000220562 ZRSR2Q15696 482 aaKnown RBP20.93■□□□□ 0.94
EXTL3-201ENST00000220562 IQCEQ6IPM2 695 aa20.93■□□□□ 0.94
EXTL3-201ENST00000220562 KIAA1328Q86T90 577 aa20.93■□□□□ 0.94
EXTL3-201ENST00000220562 RAB11FIP3O75154 756 aa20.93■□□□□ 0.94
EXTL3-201ENST00000220562 SF3B2Q13435 895 aaKnown RBP20.93■□□□□ 0.94
EXTL3-201ENST00000220562 KIF1BPQ96EK5 621 aa20.93■□□□□ 0.94
EXTL3-201ENST00000220562 KIAA0754O94854 1291 aa20.93■□□□□ 0.94
EXTL3-201ENST00000220562 PLCD4Q9BRC7 762 aa20.93■□□□□ 0.94
EXTL3-201ENST00000220562 IFT140Q96RY7 1462 aa20.93■□□□□ 0.94
EXTL3-201ENST00000220562 EIF5P55010 431 aaKnown RBP20.93■□□□□ 0.94
EXTL3-201ENST00000220562 ANKRD18AQ8IVF6 992 aa20.92■□□□□ 0.94
EXTL3-201ENST00000220562 TAX1BP1Q86VP1 789 aa20.92■□□□□ 0.94
EXTL3-201ENST00000220562 MYD88Q99836 296 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms